RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 LPAR1Q92633 364 aa16.25■□□□□ 0.19
CNOT1-206ENST00000564557 PAGR1Q9BTK6 254 aa16.25■□□□□ 0.19
CNOT1-206ENST00000564557 TANGO6Q9C0B7 1094 aa16.25■□□□□ 0.19
CNOT1-206ENST00000564557 RPAP3Q9H6T3 665 aaPredicted RBP16.25■□□□□ 0.19
CNOT1-206ENST00000564557 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
CNOT1-206ENST00000564557 CCDC171Q6TFL3 1326 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 A0A1W2PRG0 241 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 PRDM1O75626 825 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 TSPY3P0CV98 308 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 TSPY8P0CW00 308 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 EEF2P13639 858 aaKnown RBP16.24■□□□□ 0.19
CNOT1-206ENST00000564557 RASA1P20936 1047 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 CAP1Q01518 475 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 CWC27Q6UX04 472 aaKnown RBP16.24■□□□□ 0.19
CNOT1-206ENST00000564557 CATSPERGQ6ZRH7 1159 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 GOPCQ9HD26 462 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 HOXC10Q9NYD6 342 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 BIN2Q9UBW5 565 aaPredicted RBP16.24■□□□□ 0.19
CNOT1-206ENST00000564557 TMX2Q9Y320 296 aa16.24■□□□□ 0.19
CNOT1-206ENST00000564557 PDE4AP27815 886 aa16.23■□□□□ 0.19
CNOT1-206ENST00000564557 SOX10P56693 466 aa16.23■□□□□ 0.19
CNOT1-206ENST00000564557 CCNA1P78396 465 aa16.23■□□□□ 0.19
CNOT1-206ENST00000564557 TTC22Q5TAA0 569 aa16.23■□□□□ 0.19
CNOT1-206ENST00000564557 VPS53Q5VIR6 699 aa16.23■□□□□ 0.19
CNOT1-206ENST00000564557 CLEC10AQ8IUN9 316 aa16.23■□□□□ 0.19
CNOT1-206ENST00000564557 TMEM106CQ9BVX2 250 aa16.23■□□□□ 0.19
CNOT1-206ENST00000564557 VCPKMTQ9H867 229 aa16.23■□□□□ 0.19
CNOT1-206ENST00000564557 TOMM22Q9NS69 142 aa16.23■□□□□ 0.19
CNOT1-206ENST00000564557 HSPD1P10809 573 aaKnown RBP16.22■□□□□ 0.19
CNOT1-206ENST00000564557 CTGFP29279 349 aa16.22■□□□□ 0.19
CNOT1-206ENST00000564557 PRKCZQ05513 592 aa16.22■□□□□ 0.19
CNOT1-206ENST00000564557 COG2Q14746 738 aa16.22■□□□□ 0.19
CNOT1-206ENST00000564557 ALX1Q15699 326 aa16.22■□□□□ 0.19
CNOT1-206ENST00000564557 PPP4R3BQ5MIZ7 849 aa16.22■□□□□ 0.19
CNOT1-206ENST00000564557 SPICE1Q8N0Z3 855 aa16.22■□□□□ 0.19
CNOT1-206ENST00000564557 MORF4L1Q9UBU8 362 aa16.22■□□□□ 0.19
CNOT1-206ENST00000564557 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
CNOT1-206ENST00000564557 TSPY2A6NKD2 308 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 WDR46O15213 610 aaKnown RBP16.21■□□□□ 0.19
CNOT1-206ENST00000564557 FLOT1O75955 427 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 FGAP02671 866 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 ERVK-9P63128 1117 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 ERVK-24P63145 666 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 TFAP4Q01664 338 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 CTDSPL2Q05D32 466 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 CENPQQ7L2Z9 268 aaPredicted RBP16.21■□□□□ 0.19
CNOT1-206ENST00000564557 ZNF589Q86UQ0 364 aaPredicted RBP16.21■□□□□ 0.19
CNOT1-206ENST00000564557 RUFY2Q8WXA3 655 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 NYAP2Q9P242 653 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 RBPJLQ9UBG7 517 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 CLIP2Q9UDT6 1046 aa16.21■□□□□ 0.19
CNOT1-206ENST00000564557 RANBP6O60518 1105 aaKnown RBP16.2■□□□□ 0.18
CNOT1-206ENST00000564557 MAPK4P31152 587 aa16.2■□□□□ 0.18
CNOT1-206ENST00000564557 GRK4P32298 578 aa16.2■□□□□ 0.18
CNOT1-206ENST00000564557 FLT3LGP49771 235 aa16.2■□□□□ 0.18
CNOT1-206ENST00000564557 UBXN2AP68543 259 aa16.2■□□□□ 0.18
CNOT1-206ENST00000564557 FAM47AQ5JRC9 791 aa16.2■□□□□ 0.18
CNOT1-206ENST00000564557 WDR78Q5VTH9 848 aa16.2■□□□□ 0.18
CNOT1-206ENST00000564557 SIAH1Q8IUQ4 282 aa16.2■□□□□ 0.18
CNOT1-206ENST00000564557 SH3TC2Q8TF17 1288 aa16.2■□□□□ 0.18
CNOT1-206ENST00000564557 ARMC5Q96C12 935 aa16.2■□□□□ 0.18
CNOT1-206ENST00000564557 MGAMO43451 1857 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 TTLL1O95922 423 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
CNOT1-206ENST00000564557 RRP12Q5JTH9 1297 aaKnown RBP16.19■□□□□ 0.18
CNOT1-206ENST00000564557 SLAIN1Q8ND83 568 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 NEDD1Q8NHV4 660 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 CEP95Q96GE4 821 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 CCDC136Q96JN2 1154 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 TXNRD2Q9NNW7 524 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 ANAPC4Q9UJX5 808 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 ISY1Q9ULR0 285 aaKnown RBP16.19■□□□□ 0.18
CNOT1-206ENST00000564557 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 ZSWIM8A7E2V4 1837 aa16.19■□□□□ 0.18
CNOT1-206ENST00000564557 SPDYE16A6NNV3 312 aaPredicted RBP16.18■□□□□ 0.18
CNOT1-206ENST00000564557 ZNF213O14771 459 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 ADCY3O60266 1144 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 CENPBP07199 599 aaPredicted RBP16.18■□□□□ 0.18
CNOT1-206ENST00000564557 HAND2P61296 217 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 MLLT1Q03111 559 aaPredicted RBP16.18■□□□□ 0.18
CNOT1-206ENST00000564557 Q3C1V9 767 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 LBX2Q6XYB7 198 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 MFSD6Q6ZSS7 791 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
CNOT1-206ENST00000564557 RNF41Q9H4P4 317 aaPredicted RBP16.18■□□□□ 0.18
CNOT1-206ENST00000564557 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 CTNNA3Q9UI47 895 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 STX8Q9UNK0 236 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 CTDP1Q9Y5B0 961 aaPredicted RBP16.18■□□□□ 0.18
CNOT1-206ENST00000564557 IVNS1ABPQ9Y6Y0 642 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 ZMYM6O95789 1325 aa16.18■□□□□ 0.18
CNOT1-206ENST00000564557 F5H6K3 240 aa16.17■□□□□ 0.18
CNOT1-206ENST00000564557 FOXP2O15409 715 aa16.17■□□□□ 0.18
CNOT1-206ENST00000564557 PEX10O60683 326 aa16.17■□□□□ 0.18
CNOT1-206ENST00000564557 GSPT1P15170 499 aaKnown RBP16.17■□□□□ 0.18
CNOT1-206ENST00000564557 KLRC3Q07444 240 aa16.17■□□□□ 0.18
CNOT1-206ENST00000564557 IRF5Q13568 498 aa16.17■□□□□ 0.18
CNOT1-206ENST00000564557 PLS1Q14651 629 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms