RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SLC44A5Q8NCS7 719 aa18.01■□□□□ 0.47
SPG7-210ENST00000564409 DYNLL2Q96FJ2 89 aa18.01■□□□□ 0.47
SPG7-210ENST00000564409 STRBPQ96SI9 672 aaKnown RBP18.01■□□□□ 0.47
SPG7-210ENST00000564409 PUS7LQ9H0K6 701 aaKnown RBP18.01■□□□□ 0.47
SPG7-210ENST00000564409 KANSL2Q9H9L4 492 aa18.01■□□□□ 0.47
SPG7-210ENST00000564409 COLQQ9Y215 455 aaPredicted RBP18.01■□□□□ 0.47
SPG7-210ENST00000564409 TMX2Q9Y320 296 aa18.01■□□□□ 0.47
SPG7-210ENST00000564409 RLFQ13129 1914 aa18.01■□□□□ 0.47
SPG7-210ENST00000564409 ERC2O15083 957 aa18■□□□□ 0.47
SPG7-210ENST00000564409 EVI5O60447 810 aa18■□□□□ 0.47
SPG7-210ENST00000564409 PEX10O60683 326 aa18■□□□□ 0.47
SPG7-210ENST00000564409 HOXC6P09630 235 aa18■□□□□ 0.47
SPG7-210ENST00000564409 GNAT2P19087 354 aa18■□□□□ 0.47
SPG7-210ENST00000564409 PTPREP23469 700 aa18■□□□□ 0.47
SPG7-210ENST00000564409 SLFNL1Q499Z3 407 aa18■□□□□ 0.47
SPG7-210ENST00000564409 CTR9Q6PD62 1173 aa18■□□□□ 0.47
SPG7-210ENST00000564409 SHCBP1Q8NEM2 672 aa18■□□□□ 0.47
SPG7-210ENST00000564409 APPBP2Q92624 585 aa18■□□□□ 0.47
SPG7-210ENST00000564409 PAWRQ96IZ0 340 aaKnown RBP18■□□□□ 0.47
SPG7-210ENST00000564409 TANGO6Q9C0B7 1094 aa18■□□□□ 0.47
SPG7-210ENST00000564409 NBPF3Q9H094 633 aa18■□□□□ 0.47
SPG7-210ENST00000564409 VCPKMTQ9H867 229 aa18■□□□□ 0.47
SPG7-210ENST00000564409 OGDHLQ9ULD0 1010 aa18■□□□□ 0.47
SPG7-210ENST00000564409 WDR46O15213 610 aaKnown RBP17.99■□□□□ 0.47
SPG7-210ENST00000564409 RNF113AO15541 343 aaKnown RBP17.99■□□□□ 0.47
SPG7-210ENST00000564409 AKR1B1P15121 316 aa17.99■□□□□ 0.47
SPG7-210ENST00000564409 EVX2Q03828 476 aa17.99■□□□□ 0.47
SPG7-210ENST00000564409 TRIM32Q13049 653 aa17.99■□□□□ 0.47
SPG7-210ENST00000564409 BTBD7Q9P203 1132 aa17.99■□□□□ 0.47
SPG7-210ENST00000564409 A0A0G2JMZ2 1700 aa17.98■□□□□ 0.47
SPG7-210ENST00000564409 ZNF236Q9UL36 1845 aa17.98■□□□□ 0.47
SPG7-210ENST00000564409 CACNB2Q08289 660 aaPredicted RBP17.98■□□□□ 0.47
SPG7-210ENST00000564409 GRB14Q14449 540 aa17.98■□□□□ 0.47
SPG7-210ENST00000564409 WDR78Q5VTH9 848 aa17.98■□□□□ 0.47
SPG7-210ENST00000564409 MFSD14CQ5VZR4 134 aa17.98■□□□□ 0.47
SPG7-210ENST00000564409 SIAH1Q8IUQ4 282 aa17.98■□□□□ 0.47
SPG7-210ENST00000564409 ZNF287Q9HBT7 754 aa17.98■□□□□ 0.47
SPG7-210ENST00000564409 PARP14Q460N5 1801 aa17.98■□□□□ 0.47
SPG7-210ENST00000564409 CYP2D7A0A087X1C5 515 aa17.97■□□□□ 0.47
SPG7-210ENST00000564409 DSG3P32926 999 aa17.97■□□□□ 0.47
SPG7-210ENST00000564409 SPATC1LQ9H0A9 340 aa17.97■□□□□ 0.47
SPG7-210ENST00000564409 MROH8Q9H579 483 aa17.97■□□□□ 0.47
SPG7-210ENST00000564409 GOPCQ9HD26 462 aa17.97■□□□□ 0.47
SPG7-210ENST00000564409 SLC5A4Q9NY91 659 aa17.97■□□□□ 0.47
SPG7-210ENST00000564409 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
SPG7-210ENST00000564409 TRIOBPQ9H2D6 2365 aa17.97■□□□□ 0.47
SPG7-210ENST00000564409 ALPK3Q96L96 1907 aa17.96■□□□□ 0.47
SPG7-210ENST00000564409 GSG1L2A8MUP6 293 aa17.96■□□□□ 0.47
SPG7-210ENST00000564409 MSCO60682 206 aa17.96■□□□□ 0.47
SPG7-210ENST00000564409 FLOT1O75955 427 aa17.96■□□□□ 0.47
SPG7-210ENST00000564409 CHGBP05060 677 aa17.96■□□□□ 0.47
SPG7-210ENST00000564409 RRP1P56182 461 aaKnown RBP17.96■□□□□ 0.47
SPG7-210ENST00000564409 ATP2B2Q01814 1243 aa17.96■□□□□ 0.47
SPG7-210ENST00000564409 ABRAQ8N0Z2 381 aa17.96■□□□□ 0.47
SPG7-210ENST00000564409 OSBP2Q969R2 916 aa17.96■□□□□ 0.47
SPG7-210ENST00000564409 MOV10L1Q9BXT6 1211 aaKnown RBP17.96■□□□□ 0.47
SPG7-210ENST00000564409 GREB1LQ9C091 1923 aaPredicted RBP17.96■□□□□ 0.47
SPG7-210ENST00000564409 ZNFX1Q9P2E3 1918 aaKnown RBP17.96■□□□□ 0.47
SPG7-210ENST00000564409 ROBO3Q96MS0 1386 aa17.95■□□□□ 0.46
SPG7-210ENST00000564409 A0A1W2PPC1 479 aa17.95■□□□□ 0.46
SPG7-210ENST00000564409 EEF2P13639 858 aaKnown RBP17.95■□□□□ 0.46
SPG7-210ENST00000564409 FXR1P51114 621 aaKnown RBP eCLIP17.95■□□□□ 0.46
SPG7-210ENST00000564409 AAMPQ13685 434 aa17.95■□□□□ 0.46
SPG7-210ENST00000564409 CCL14Q16627 93 aa17.95■□□□□ 0.46
SPG7-210ENST00000564409 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
SPG7-210ENST00000564409 ZBTB47Q9UFB7 747 aaPredicted RBP17.95■□□□□ 0.46
SPG7-210ENST00000564409 GPAA1O43292 621 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 SLC25A27O95847 323 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 KIAA1755Q5JYT7 1200 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 OLFML2BQ68BL8 750 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 LHX8Q68G74 356 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 CHRDL2Q6WN34 429 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 DPP9Q86TI2 863 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 DIS3LQ8TF46 1054 aaKnown RBP17.94■□□□□ 0.46
SPG7-210ENST00000564409 NACAP1Q9BZK3 213 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 C11orf49Q9H6J7 331 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 ADAMTS5Q9UNA0 930 aa17.94■□□□□ 0.46
SPG7-210ENST00000564409 FRMPD3Q5JV73 1810 aa17.93■□□□□ 0.46
SPG7-210ENST00000564409 PATL2C9JE40 543 aaKnown RBP17.93■□□□□ 0.46
SPG7-210ENST00000564409 ERCC3P19447 782 aa17.93■□□□□ 0.46
SPG7-210ENST00000564409 CCND3P30281 292 aaPredicted RBP17.93■□□□□ 0.46
SPG7-210ENST00000564409 COPB2P35606 906 aa17.93■□□□□ 0.46
SPG7-210ENST00000564409 MNX1P50219 401 aaPredicted RBP17.93■□□□□ 0.46
SPG7-210ENST00000564409 CLEC10AQ8IUN9 316 aa17.93■□□□□ 0.46
SPG7-210ENST00000564409 SPICE1Q8N0Z3 855 aa17.93■□□□□ 0.46
SPG7-210ENST00000564409 PI4K2BQ8TCG2 481 aa17.93■□□□□ 0.46
SPG7-210ENST00000564409 PRO3102Q9H379 93 aa17.93■□□□□ 0.46
SPG7-210ENST00000564409 SYNPO2Q9UMS6 1093 aa17.93■□□□□ 0.46
SPG7-210ENST00000564409 COL11A1P12107 1806 aaPredicted RBP17.93■□□□□ 0.46
SPG7-210ENST00000564409 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 MINDY4BA8MYZ0 360 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 SMIM22K7EJ46 135 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 IGHA2P01877 340 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 APPP05067 770 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 MX1P20591 662 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 RASA1P20936 1047 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 ADORA2AP29274 412 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 TDO2P48775 406 aa17.92■□□□□ 0.46
SPG7-210ENST00000564409 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms