RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 USP17L24Q0WX57 530 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 TSGA10IPQ3SY00 556 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 DGKHQ86XP1 1220 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 STK11IPQ8N1F8 1099 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 MYPNQ86TC9 1320 aa19.69■□□□□ 0.74
RNF40-206ENST00000564260 HSPA8P11142 646 aaKnown RBP19.68■□□□□ 0.74
RNF40-206ENST00000564260 ZKSCAN1P17029 563 aaPredicted RBP19.68■□□□□ 0.74
RNF40-206ENST00000564260 VCAM1P19320 739 aa19.68■□□□□ 0.74
RNF40-206ENST00000564260 CRHR2Q13324 411 aa19.68■□□□□ 0.74
RNF40-206ENST00000564260 KRT32Q14532 448 aa19.68■□□□□ 0.74
RNF40-206ENST00000564260 FAM47AQ5JRC9 791 aa19.68■□□□□ 0.74
RNF40-206ENST00000564260 RALYLQ86SE5 291 aaKnown RBP19.68■□□□□ 0.74
RNF40-206ENST00000564260 NCOA7Q8NI08 942 aa19.68■□□□□ 0.74
RNF40-206ENST00000564260 NEDD4P46934 1319 aa19.68■□□□□ 0.74
RNF40-206ENST00000564260 IRX3P78415 501 aaPredicted RBP19.67■□□□□ 0.74
RNF40-206ENST00000564260 RRP12Q5JTH9 1297 aaKnown RBP19.67■□□□□ 0.74
RNF40-206ENST00000564260 LBX2Q6XYB7 198 aa19.67■□□□□ 0.74
RNF40-206ENST00000564260 ANKS1AQ92625 1134 aa19.67■□□□□ 0.74
RNF40-206ENST00000564260 IL17RBQ9NRM6 502 aa19.67■□□□□ 0.74
RNF40-206ENST00000564260 CLIP2Q9UDT6 1046 aa19.67■□□□□ 0.74
RNF40-206ENST00000564260 STX8Q9UNK0 236 aa19.67■□□□□ 0.74
RNF40-206ENST00000564260 TACC3Q9Y6A5 838 aa19.67■□□□□ 0.74
RNF40-206ENST00000564260 E7EWF7 191 aa19.66■□□□□ 0.74
RNF40-206ENST00000564260 GPR25O00155 361 aa19.66■□□□□ 0.74
RNF40-206ENST00000564260 TOP1P11387 765 aaKnown RBP19.66■□□□□ 0.74
RNF40-206ENST00000564260 SART3Q15020 963 aaKnown RBP19.66■□□□□ 0.74
RNF40-206ENST00000564260 ARHGEF6Q15052 776 aa19.66■□□□□ 0.74
RNF40-206ENST00000564260 TREML2Q5T2D2 321 aa19.66■□□□□ 0.74
RNF40-206ENST00000564260 CREB3L3Q68CJ9 461 aa19.66■□□□□ 0.74
RNF40-206ENST00000564260 RCSD1Q6JBY9 416 aa19.66■□□□□ 0.74
RNF40-206ENST00000564260 CATSPERGQ6ZRH7 1159 aa19.66■□□□□ 0.74
RNF40-206ENST00000564260 SMCR8Q8TEV9 937 aaPredicted RBP19.66■□□□□ 0.74
RNF40-206ENST00000564260 GMCL1Q96IK5 515 aa19.66■□□□□ 0.74
RNF40-206ENST00000564260 ADGRA2Q96PE1 1338 aa19.66■□□□□ 0.74
RNF40-206ENST00000564260 F5H6K3 240 aa19.65■□□□□ 0.74
RNF40-206ENST00000564260 SLC27A2O14975 620 aa19.65■□□□□ 0.74
RNF40-206ENST00000564260 KDM4AO75164 1064 aa19.65■□□□□ 0.74
RNF40-206ENST00000564260 ATP2B2Q01814 1243 aa19.65■□□□□ 0.74
RNF40-206ENST00000564260 KLRC3Q07444 240 aa19.65■□□□□ 0.74
RNF40-206ENST00000564260 C17orf99Q6UX52 265 aa19.65■□□□□ 0.74
RNF40-206ENST00000564260 KCNB2Q92953 911 aa19.65■□□□□ 0.74
RNF40-206ENST00000564260 UBAC1Q9BSL1 405 aa19.65■□□□□ 0.74
RNF40-206ENST00000564260 ASCC2Q9H1I8 757 aaPredicted RBP19.65■□□□□ 0.74
RNF40-206ENST00000564260 HOXC10Q9NYD6 342 aa19.65■□□□□ 0.74
RNF40-206ENST00000564260 B4E1Z4 1266 aa19.64■□□□□ 0.73
RNF40-206ENST00000564260 TBC1D8O95759 1140 aa19.64■□□□□ 0.73
RNF40-206ENST00000564260 HMGB1P09429 215 aaKnown RBP19.64■□□□□ 0.73
RNF40-206ENST00000564260 MB21D1Q8N884 522 aa19.64■□□□□ 0.73
RNF40-206ENST00000564260 ZSCAN10Q96SZ4 725 aaPredicted RBP19.64■□□□□ 0.73
RNF40-206ENST00000564260 RPAP3Q9H6T3 665 aaPredicted RBP19.64■□□□□ 0.73
RNF40-206ENST00000564260 INCENPQ9NQS7 918 aa19.64■□□□□ 0.73
RNF40-206ENST00000564260 ZSWIM5Q9P217 1185 aa19.64■□□□□ 0.73
RNF40-206ENST00000564260 GTF3C3Q9Y5Q9 886 aa19.64■□□□□ 0.73
RNF40-206ENST00000564260 WDR19Q8NEZ3 1342 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 PLA2G6O60733 806 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 FKTNO75072 461 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 GNRH1P01148 92 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 FDX1P10109 184 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 MCCP23508 829 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 HSPA4P34932 840 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 COG2Q14746 738 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 ZYXQ15942 572 aaKnown RBP19.63■□□□□ 0.73
RNF40-206ENST00000564260 FAM110CQ1W6H9 321 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 CLEC10AQ8IUN9 316 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 ERO1AQ96HE7 468 aa19.63■□□□□ 0.73
RNF40-206ENST00000564260 ERICH2A1L162 156 aa19.62■□□□□ 0.73
RNF40-206ENST00000564260 NDUFB10O96000 172 aa19.62■□□□□ 0.73
RNF40-206ENST00000564260 BCRP11274 1271 aa19.62■□□□□ 0.73
RNF40-206ENST00000564260 HERVK_113P62684 666 aa19.62■□□□□ 0.73
RNF40-206ENST00000564260 SP3Q02447 781 aa19.62■□□□□ 0.73
RNF40-206ENST00000564260 DCAF4Q8WV16 495 aa19.62■□□□□ 0.73
RNF40-206ENST00000564260 MORF4L1Q9UBU8 362 aa19.62■□□□□ 0.73
RNF40-206ENST00000564260 TNKSO95271 1327 aa19.61■□□□□ 0.73
RNF40-206ENST00000564260 CYP2C8P10632 490 aa19.61■□□□□ 0.73
RNF40-206ENST00000564260 MCM5P33992 734 aa19.61■□□□□ 0.73
RNF40-206ENST00000564260 LBX1P52954 281 aa19.61■□□□□ 0.73
RNF40-206ENST00000564260 MB21D2Q8IYB1 491 aaPredicted RBP19.61■□□□□ 0.73
RNF40-206ENST00000564260 TMTC2Q8N394 836 aa19.61■□□□□ 0.73
RNF40-206ENST00000564260 TMEM87BQ96K49 555 aa19.61■□□□□ 0.73
RNF40-206ENST00000564260 TMEM47Q9BQJ4 181 aa19.61■□□□□ 0.73
RNF40-206ENST00000564260 RABGAP1Q9Y3P9 1069 aa19.61■□□□□ 0.73
RNF40-206ENST00000564260 KIF22Q14807 665 aa19.6■□□□□ 0.73
RNF40-206ENST00000564260 SLFN13Q68D06 897 aa19.6■□□□□ 0.73
RNF40-206ENST00000564260 ZNF296Q8WUU4 475 aaPredicted RBP19.6■□□□□ 0.73
RNF40-206ENST00000564260 USP26Q9BXU7 913 aa19.6■□□□□ 0.73
RNF40-206ENST00000564260 TANGO6Q9C0B7 1094 aa19.6■□□□□ 0.73
RNF40-206ENST00000564260 FEM1BQ9UK73 627 aa19.6■□□□□ 0.73
RNF40-206ENST00000564260 NMT2O60551 498 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 BMP3P12645 472 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 SLC1A4P43007 532 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 DGKZQ13574 1117 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 GPATCH4Q5T3I0 446 aaKnown RBP19.59■□□□□ 0.73
RNF40-206ENST00000564260 STOX1Q6ZVD7 989 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 FAM160B2Q86V87 743 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 SPICE1Q8N0Z3 855 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 LRRC47Q8N1G4 583 aaKnown RBP19.59■□□□□ 0.73
RNF40-206ENST00000564260 ENAHQ8N8S7 591 aaPredicted RBP19.59■□□□□ 0.73
RNF40-206ENST00000564260 PRPF38AQ8NAV1 312 aaKnown RBP19.59■□□□□ 0.73
RNF40-206ENST00000564260 CHURC1Q8WUH1 139 aa19.59■□□□□ 0.73
RNF40-206ENST00000564260 NEK1Q96PY6 1258 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms