RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 USP17L15C9J2P7 530 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 USP17L13C9JLJ4 530 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 USP17L11C9JVI0 530 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 USP17L18D6R9N7 530 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 USP17L22D6RA61 530 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 USP17L17D6RBQ6 530 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 USP17L19D6RCP7 530 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 USP17L20D6RJB6 530 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 EEF2P13639 858 aaKnown RBP20.25■□□□□ 0.83
SPSB3-202ENST00000563668 ICA1Q05084 483 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 USP17L24Q0WX57 530 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 RPAP3Q9H6T3 665 aaPredicted RBP20.25■□□□□ 0.83
SPSB3-202ENST00000563668 HELLSQ9NRZ9 838 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 MORF4L1Q9UBU8 362 aa20.25■□□□□ 0.83
SPSB3-202ENST00000563668 TNPO2O14787 897 aaKnown RBP20.24■□□□□ 0.83
SPSB3-202ENST00000563668 CNMDO75829 334 aa20.24■□□□□ 0.83
SPSB3-202ENST00000563668 FLT3LGP49771 235 aa20.24■□□□□ 0.83
SPSB3-202ENST00000563668 SPICE1Q8N0Z3 855 aa20.24■□□□□ 0.83
SPSB3-202ENST00000563668 NAPBQ9H115 298 aa20.24■□□□□ 0.83
SPSB3-202ENST00000563668 MKNK2Q9HBH9 465 aa20.24■□□□□ 0.83
SPSB3-202ENST00000563668 TMX2Q9Y320 296 aa20.24■□□□□ 0.83
SPSB3-202ENST00000563668 HOXD10P28358 340 aa20.23■□□□□ 0.83
SPSB3-202ENST00000563668 PRMT2P55345 433 aa20.23■□□□□ 0.83
SPSB3-202ENST00000563668 ATP2B2Q01814 1243 aa20.23■□□□□ 0.83
SPSB3-202ENST00000563668 MCMDC2Q4G0Z9 681 aa20.23■□□□□ 0.83
SPSB3-202ENST00000563668 PAGR1Q9BTK6 254 aa20.23■□□□□ 0.83
SPSB3-202ENST00000563668 NACAP1Q9BZK3 213 aa20.23■□□□□ 0.83
SPSB3-202ENST00000563668 CTDSPL2Q05D32 466 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 PPARAQ07869 468 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 RAET1EQ8TD07 263 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 PORCNQ9H237 461 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 KANSL2Q9H9L4 492 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 GREB1LQ9C091 1923 aaPredicted RBP20.22■□□□□ 0.83
SPSB3-202ENST00000563668 MTFR1Q15390 333 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 GPRC5AQ8NFJ5 357 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 VCPKMTQ9H867 229 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 ARHGEF10LQ9HCE6 1279 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 BTBD7Q9P203 1132 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 GJD2Q9UKL4 321 aa20.22■□□□□ 0.83
SPSB3-202ENST00000563668 IGKV6D-41A0A0C4DH26 115 aa20.21■□□□□ 0.83
SPSB3-202ENST00000563668 SPDYE16A6NNV3 312 aaPredicted RBP20.21■□□□□ 0.83
SPSB3-202ENST00000563668 ELNP15502 786 aa20.21■□□□□ 0.83
SPSB3-202ENST00000563668 ERVK-9P63128 1117 aa20.21■□□□□ 0.83
SPSB3-202ENST00000563668 ERVK-24P63145 666 aa20.21■□□□□ 0.83
SPSB3-202ENST00000563668 FAM47AQ5JRC9 791 aa20.21■□□□□ 0.83
SPSB3-202ENST00000563668 CASC1Q6TDU7 716 aa20.21■□□□□ 0.83
SPSB3-202ENST00000563668 RLFQ13129 1914 aa20.2■□□□□ 0.82
SPSB3-202ENST00000563668 FGAP02671 866 aa20.2■□□□□ 0.82
SPSB3-202ENST00000563668 HSPD1P10809 573 aaKnown RBP20.2■□□□□ 0.82
SPSB3-202ENST00000563668 GRK4P32298 578 aa20.2■□□□□ 0.82
SPSB3-202ENST00000563668 MLLT1Q03111 559 aaPredicted RBP20.2■□□□□ 0.82
SPSB3-202ENST00000563668 NBPF11Q86T75 865 aa20.2■□□□□ 0.82
SPSB3-202ENST00000563668 KIF2CQ99661 725 aa20.2■□□□□ 0.82
SPSB3-202ENST00000563668 EN2P19622 333 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-202ENST00000563668 NBR1Q14596 966 aa20.19■□□□□ 0.82
SPSB3-202ENST00000563668 ZNF444Q8N0Y2 327 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-202ENST00000563668 COA7Q96BR5 231 aa20.19■□□□□ 0.82
SPSB3-202ENST00000563668 PLXNB2O15031 1838 aa20.19■□□□□ 0.82
SPSB3-202ENST00000563668 ALX1Q15699 326 aa20.18■□□□□ 0.82
SPSB3-202ENST00000563668 CWC27Q6UX04 472 aaKnown RBP20.18■□□□□ 0.82
SPSB3-202ENST00000563668 LBX2Q6XYB7 198 aa20.18■□□□□ 0.82
SPSB3-202ENST00000563668 TICAM2Q86XR7 235 aa20.18■□□□□ 0.82
SPSB3-202ENST00000563668 SNX21Q969T3 373 aa20.18■□□□□ 0.82
SPSB3-202ENST00000563668 CEP95Q96GE4 821 aa20.18■□□□□ 0.82
SPSB3-202ENST00000563668 TANGO6Q9C0B7 1094 aa20.18■□□□□ 0.82
SPSB3-202ENST00000563668 IL25Q9H293 177 aa20.18■□□□□ 0.82
SPSB3-202ENST00000563668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.18■□□□□ 0.82
SPSB3-202ENST00000563668 RABGAP1Q9Y3P9 1069 aa20.18■□□□□ 0.82
SPSB3-202ENST00000563668 CCDC171Q6TFL3 1326 aa20.18■□□□□ 0.82
SPSB3-202ENST00000563668 ADCY3O60266 1144 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 COG2Q14746 738 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 NKX2-3Q8TAU0 364 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 LPAR1Q92633 364 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 FBXO28Q9NVF7 368 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 CLIP2Q9UDT6 1046 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 TFAP4Q01664 338 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 IRF5Q13568 498 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 NUP88Q99567 741 aaPredicted RBP20.17■□□□□ 0.82
SPSB3-202ENST00000563668 USP26Q9BXU7 913 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 NYAP2Q9P242 653 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 ANAPC4Q9UJX5 808 aa20.17■□□□□ 0.82
SPSB3-202ENST00000563668 KIAA0100Q14667 2235 aaKnown RBP20.17■□□□□ 0.82
SPSB3-202ENST00000563668 RAD21O60216 631 aa20.16■□□□□ 0.82
SPSB3-202ENST00000563668 PDE4BQ07343 736 aa20.16■□□□□ 0.82
SPSB3-202ENST00000563668 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
SPSB3-202ENST00000563668 NEDD1Q8NHV4 660 aa20.16■□□□□ 0.82
SPSB3-202ENST00000563668 ATG4CQ96DT6 458 aa20.16■□□□□ 0.82
SPSB3-202ENST00000563668 NBPF3Q9H094 633 aa20.16■□□□□ 0.82
SPSB3-202ENST00000563668 SH2D4AQ9H788 454 aa20.16■□□□□ 0.82
SPSB3-202ENST00000563668 MTMR4Q9NYA4 1195 aa20.16■□□□□ 0.82
SPSB3-202ENST00000563668 WDR46O15213 610 aaKnown RBP20.15■□□□□ 0.82
SPSB3-202ENST00000563668 NMT2O60551 498 aa20.15■□□□□ 0.82
SPSB3-202ENST00000563668 FLOT1O75955 427 aa20.15■□□□□ 0.82
SPSB3-202ENST00000563668 DSG3P32926 999 aa20.15■□□□□ 0.82
SPSB3-202ENST00000563668 HAND2P61296 217 aa20.15■□□□□ 0.82
SPSB3-202ENST00000563668 FAM83BQ5T0W9 1011 aa20.15■□□□□ 0.82
SPSB3-202ENST00000563668 GPR142Q7Z601 462 aa20.15■□□□□ 0.82
SPSB3-202ENST00000563668 SLAIN1Q8ND83 568 aa20.15■□□□□ 0.82
SPSB3-202ENST00000563668 GTF3C2Q8WUA4 911 aaPredicted RBP20.15■□□□□ 0.82
SPSB3-202ENST00000563668 ZNF287Q9HBT7 754 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms