RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 UBXN1Q04323 297 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 ACTN3Q08043 901 aaPredicted RBP14.31□□□□□ -0.12
CCDC187-201ENST00000563590 FBXL16Q8N461 479 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
CCDC187-201ENST00000563590 NKX2-3Q8TAU0 364 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 MAP3K14Q99558 947 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 TEX13AQ9BXU3 409 aaPredicted RBP14.31□□□□□ -0.12
CCDC187-201ENST00000563590 PUS7LQ9H0K6 701 aaKnown RBP14.31□□□□□ -0.12
CCDC187-201ENST00000563590 ARMT1Q9H993 441 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.31□□□□□ -0.12
CCDC187-201ENST00000563590 BAZ2BQ9UIF8 2168 aaKnown RBP14.31□□□□□ -0.12
CCDC187-201ENST00000563590 SYNRGQ9UMZ2 1314 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 HNRNPH1P31943 449 aaKnown RBP14.31□□□□□ -0.12
CCDC187-201ENST00000563590 HPDP32754 393 aaPredicted RBP14.31□□□□□ -0.12
CCDC187-201ENST00000563590 RNASE9P60153 205 aaKnown RBP14.31□□□□□ -0.12
CCDC187-201ENST00000563590 GRIN1Q05586 938 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 C2orf54Q08AI8 447 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 MAGEB6Q8N7X4 407 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 IFT81Q8WYA0 676 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 PLIN2Q99541 437 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 SLC24A3Q9HC58 644 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 WWC3Q9ULE0 1092 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 SUFUQ9UMX1 484 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 ERICH2A1L162 156 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 GPAA1O43292 621 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 MYO1BO43795 1136 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 ZNF18P17022 549 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 GREM2Q9H772 168 aa14.31□□□□□ -0.12
CCDC187-201ENST00000563590 CCDC172P0C7W6 258 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 CASP7P55210 303 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 ODF2Q5BJF6 829 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 CNGA4Q8IV77 575 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 SENP2Q9HC62 589 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC187-201ENST00000563590 TTF2Q9UNY4 1162 aaKnown RBP14.3□□□□□ -0.12
CCDC187-201ENST00000563590 IRS4O14654 1257 aaPredicted RBP14.3□□□□□ -0.12
CCDC187-201ENST00000563590 ZBTB43O43298 467 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 NEBLO76041 1014 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 IDEP14735 1019 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 FOXO4P98177 505 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 E2F5Q15329 346 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 ENOX2Q16206 610 aaKnown RBP14.3□□□□□ -0.12
CCDC187-201ENST00000563590 MLKLQ8NB16 471 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 MED15Q96RN5 788 aa14.3□□□□□ -0.12
CCDC187-201ENST00000563590 HLFQ16534 295 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 WHAMMP3Q1A5X7 153 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 LRP10Q7Z4F1 713 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 TRIM22Q8IYM9 498 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 IQUBQ8NA54 791 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 PLBD2Q8NHP8 589 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 CABP5Q9NP86 173 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 SAR1BQ9Y6B6 198 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 IL15P40933 162 aaPredicted RBP14.29□□□□□ -0.12
CCDC187-201ENST00000563590 FXR1P51114 621 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC187-201ENST00000563590 SSRP1Q08945 709 aaKnown RBP14.29□□□□□ -0.12
CCDC187-201ENST00000563590 PIGBQ92521 554 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 ZNHIT6Q9NWK9 470 aaKnown RBP14.29□□□□□ -0.12
CCDC187-201ENST00000563590 FAM237AA0A1B0GTK4 181 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 ANKRD18BA2A2Z9 1011 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 ZNF185O15231 689 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 RPSAP08865 295 aaKnown RBP14.29□□□□□ -0.12
CCDC187-201ENST00000563590 CXCR5P32302 372 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 MDM2Q00987 491 aaPredicted RBP14.29□□□□□ -0.12
CCDC187-201ENST00000563590 USP49Q70CQ1 688 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 MAATS1Q7Z4T9 603 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 DIS3L2Q8IYB7 885 aaKnown RBP14.29□□□□□ -0.12
CCDC187-201ENST00000563590 KIRREL3Q8IZU9 778 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 CD248Q9HCU0 757 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 CEP83Q9Y592 693 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 SLC12A7Q9Y666 1083 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 NFAT5O94916 1531 aa14.29□□□□□ -0.12
CCDC187-201ENST00000563590 GOLGA6L7A0A1B0GV03 622 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 CLGNO14967 610 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 ENOX1Q8TC92 643 aaKnown RBP14.28□□□□□ -0.12
CCDC187-201ENST00000563590 HNRNPLLQ8WVV9 542 aaKnown RBP14.28□□□□□ -0.12
CCDC187-201ENST00000563590 CCDC114Q96M63 670 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 MMS19Q96T76 1030 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC187-201ENST00000563590 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 PRKAB2O43741 272 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 HSF2BPO75031 334 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 MCM3P25205 808 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 PHKA1P46020 1223 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 CCDC96Q2M329 555 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 RPAINQ86UA6 219 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 SH2D3CQ8N5H7 860 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 SEC31BQ9NQW1 1179 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 MBD4O95243 580 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 NR1I3Q14994 352 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 NAA25Q14CX7 972 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 SELENOOQ9BVL4 669 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 RAB21Q9UL25 225 aa14.28□□□□□ -0.12
CCDC187-201ENST00000563590 NR5A1Q13285 461 aa14.27□□□□□ -0.12
CCDC187-201ENST00000563590 CYB5R4Q7L1T6 521 aa14.27□□□□□ -0.12
CCDC187-201ENST00000563590 MSANTD4Q8NCY6 345 aa14.27□□□□□ -0.12
CCDC187-201ENST00000563590 N4BP2L2Q92802 583 aaPredicted RBP14.27□□□□□ -0.12
CCDC187-201ENST00000563590 JAKMIP2Q96AA8 810 aa14.27□□□□□ -0.12
CCDC187-201ENST00000563590 CHP1Q99653 195 aa14.27□□□□□ -0.12
CCDC187-201ENST00000563590 UBAC1Q9BSL1 405 aa14.27□□□□□ -0.12
CCDC187-201ENST00000563590 ANGEL1Q9UNK9 670 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms