RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ADORA2AP29274 412 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 IL15P40933 162 aaPredicted RBP9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 CCDC85BQ15834 202 aaPredicted RBP9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 TMEM240Q5SV17 173 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 WDR78Q5VTH9 848 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 PI16Q6UXB8 463 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 TBC1D9Q6ZT07 1266 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 ANKRD33Q7Z3H0 272 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 FOXP4Q8IVH2 680 aaPredicted RBP9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 MRPL50Q8N5N7 158 aaKnown RBP9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 XAGE2Q96GT9 111 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 CWC22Q9HCG8 908 aaKnown RBP9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 C11orf16Q9NQ32 467 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 PA2G4Q9UQ80 394 aaKnown RBP9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 HCN4Q9Y3Q4 1203 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 IVNS1ABPQ9Y6Y0 642 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 ROBO3Q96MS0 1386 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 FLT1P17948 1338 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 PRRC2BQ5JSZ5 2229 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 NAV1Q8NEY1 1877 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 A0A1B0GUL7 405 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 A0A1W2PQ45 241 aaPredicted RBP9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 A0A1W2PQY0 241 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 PQBP1O60828 265 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 VCAM1P19320 739 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 GSTO1P78417 241 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 TFF2Q03403 129 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 KHSRPQ92945 711 aaKnown RBP eCLIP9.56□□□□□ -0.882e-11■■□□□ 11.7
HERPUD1-206ENST00000563343 TOX2Q96NM4 488 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 MOV10L1Q9BXT6 1211 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 KIAA1683Q9H0B3 1180 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 COPRSQ9NQ92 184 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 TBX21Q9UL17 535 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 PTPRCP08575 1304 aa9.56□□□□□ -0.88
HERPUD1-206ENST00000563343 COL4A4P53420 1690 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 PTPRSQ13332 1948 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 STRNO43815 780 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 TIMP1P01033 207 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 GH2P01242 217 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 KCNQ1P51787 676 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 PPP4CP60510 307 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 ZYXQ15942 572 aaKnown RBP9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 MFSD5Q6N075 450 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 TATDN1Q6P1N9 297 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 ADGRA1Q86SQ6 560 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 DPP9Q86TI2 863 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 MAPKAPK5Q8IW41 473 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 SLC44A5Q8NCS7 719 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 SHCBP1Q8NEM2 672 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 ACER1Q8TDN7 264 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 MAML3Q96JK9 1138 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 XPNPEP3Q9NQH7 507 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 TMEM39AQ9NV64 488 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 PALD1Q9ULE6 856 aa9.55□□□□□ -0.88
HERPUD1-206ENST00000563343 ADAMTS4O75173 837 aa9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 PGK1P00558 417 aa9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 IGFBP4P22692 258 aa9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 ARID4AP29374 1257 aaPredicted RBP9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 GUCY1A2P33402 732 aa9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 TMEM31Q5JXX7 168 aa9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 ALYREFQ86V81 257 aaKnown RBP9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 CRACR2BQ8N4Y2 399 aaPredicted RBP9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 SPATA5Q8NB90 893 aa9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 TGFBRAP1Q8WUH2 860 aa9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 AATFQ9NY61 560 aaKnown RBP eCLIP9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 YBX2Q9Y2T7 364 aaKnown RBP9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 SALL2Q9Y467 1007 aaPredicted RBP9.54□□□□□ -0.88
HERPUD1-206ENST00000563343 SCN5AQ14524 2016 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 ERC2O15083 957 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 GPR37L1O60883 481 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 ERCC3P19447 782 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 MCAMP43121 646 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 CDK7P50613 346 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 USP14P54578 494 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 PPIGQ13427 754 aaKnown RBP eCLIP9.53□□□□□ -0.881e-7■■□□□ 13.6
HERPUD1-206ENST00000563343 MVPQ14764 893 aaKnown RBP9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 CCSAPQ6IQ19 270 aaPredicted RBP9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 CCDC129Q6ZRS4 1044 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 ZNF365Q70YC5 407 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 KLHDC9Q8NEP7 349 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 SNX27Q96L92 541 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 SPATC1LQ9H0A9 340 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 NKX2-4Q9H2Z4 354 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 RPAP3Q9H6T3 665 aaPredicted RBP9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 RAI14Q9P0K7 980 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 WDFY4Q6ZS81 3184 aa9.53□□□□□ -0.88
HERPUD1-206ENST00000563343 TLL1O43897 1013 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 ZNF865P0CJ78 1059 aaPredicted RBP9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 ACRP10323 421 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 RARBP10826 455 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 CSF2RAP15509 400 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 TAL1P17542 331 aaPredicted RBP9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 ACLYP53396 1101 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 TFCP2Q12800 502 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 RAB30Q15771 203 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 RNF180Q86T96 592 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 ABRAQ8N0Z2 381 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 HERVK_113Q902F9 699 aa9.52□□□□□ -0.89
HERPUD1-206ENST00000563343 LENG1Q96BZ8 264 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms