RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 PPP2R2DQ66LE6 453 aa12.34□□□□□ -0.43
SNX29-202ENST00000563308 METTL16Q86W50 562 aaKnown RBP12.34□□□□□ -0.43
SNX29-202ENST00000563308 APBA2Q99767 749 aa12.34□□□□□ -0.43
SNX29-202ENST00000563308 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNX29-202ENST00000563308 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.34□□□□□ -0.432e-8■■■■■ 42.5
SNX29-202ENST00000563308 ZBTB40Q9NUA8 1239 aa12.34□□□□□ -0.43
SNX29-202ENST00000563308 NDUFB9Q9Y6M9 179 aa12.34□□□□□ -0.43
SNX29-202ENST00000563308 FRMPD3Q5JV73 1810 aa12.34□□□□□ -0.43
SNX29-202ENST00000563308 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
SNX29-202ENST00000563308 APBB1O00213 710 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 KIAA0355O15063 1070 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 DCXO43602 365 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 IGSF3O75054 1194 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 RGS20O76081 388 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 ID4P47928 161 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 JAG1P78504 1218 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 SNX17Q15036 470 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
SNX29-202ENST00000563308 IRF2BPLQ9H1B7 796 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 DNAJC18Q9H819 358 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 DOCK1Q14185 1865 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 FLT1P17948 1338 aa12.33□□□□□ -0.44
SNX29-202ENST00000563308 GLRX3O76003 335 aaKnown RBP12.32□□□□□ -0.44
SNX29-202ENST00000563308 BAG3O95817 575 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 CAP2P40123 477 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 ADCYAP1R1P41586 468 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 DYNLL1P63167 89 aaKnown RBP12.32□□□□□ -0.44
SNX29-202ENST00000563308 ATP2B2Q01814 1243 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 CCL14Q16627 93 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 MAPKAPK5Q8IW41 473 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 SLC44A5Q8NCS7 719 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 GPRC5AQ8NFJ5 357 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 TGFBRAP1Q8WUH2 860 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 CD320Q9NPF0 282 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 PI4KBQ9UBF8 816 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 HERC5Q9UII4 1024 aaKnown RBP12.32□□□□□ -0.44
SNX29-202ENST00000563308 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 RLFQ13129 1914 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
SNX29-202ENST00000563308 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
SNX29-202ENST00000563308 PQBP1O60828 265 aaKnown RBP12.31□□□□□ -0.44
SNX29-202ENST00000563308 PLCG2P16885 1265 aa12.31□□□□□ -0.44
SNX29-202ENST00000563308 CYP7A1P22680 504 aa12.31□□□□□ -0.44
SNX29-202ENST00000563308 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
SNX29-202ENST00000563308 SPP2Q13103 211 aa12.31□□□□□ -0.44
SNX29-202ENST00000563308 SHROOM1Q2M3G4 852 aaPredicted RBP12.31□□□□□ -0.44
SNX29-202ENST00000563308 PSRC1Q6PGN9 363 aaPredicted RBP12.31□□□□□ -0.44
SNX29-202ENST00000563308 AACSQ86V21 672 aa12.31□□□□□ -0.44
SNX29-202ENST00000563308 ERC1Q8IUD2 1116 aa12.31□□□□□ -0.44
SNX29-202ENST00000563308 RHPN1Q8TCX5 695 aa12.31□□□□□ -0.44
SNX29-202ENST00000563308 NOL10Q9BSC4 688 aaKnown RBP12.31□□□□□ -0.44
SNX29-202ENST00000563308 DHX36Q9H2U1 1008 aaKnown RBP12.31□□□□□ -0.44
SNX29-202ENST00000563308 IL1RAPL2Q9NP60 686 aa12.31□□□□□ -0.44
SNX29-202ENST00000563308 PKD1L2Q7Z442 2459 aa12.31□□□□□ -0.44
SNX29-202ENST00000563308 PTPRFP10586 1907 aa12.31□□□□□ -0.44
SNX29-202ENST00000563308 DCDC2CA8MYV0 355 aa12.3□□□□□ -0.44
SNX29-202ENST00000563308 IDH1O75874 414 aaKnown RBP12.3□□□□□ -0.44
SNX29-202ENST00000563308 MS4A1P11836 297 aa12.3□□□□□ -0.44
SNX29-202ENST00000563308 C20orf194Q5TEA3 1177 aa12.3□□□□□ -0.44
SNX29-202ENST00000563308 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
SNX29-202ENST00000563308 ZNF280CQ8ND82 737 aa12.3□□□□□ -0.44
SNX29-202ENST00000563308 EDC3Q96F86 508 aaKnown RBP12.3□□□□□ -0.44
SNX29-202ENST00000563308 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
SNX29-202ENST00000563308 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
SNX29-202ENST00000563308 PALD1Q9ULE6 856 aa12.3□□□□□ -0.44
SNX29-202ENST00000563308 PLXNB2O15031 1838 aa12.3□□□□□ -0.44
SNX29-202ENST00000563308 SPTBN4Q9H254 2564 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 USP17L5A8MUK1 530 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 HMGCS2P54868 508 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 SH3D19Q5HYK7 790 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 SAMD1Q6SPF0 538 aaPredicted RBP12.29□□□□□ -0.44
SNX29-202ENST00000563308 PLEKHH3Q7Z736 793 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 FOXP4Q8IVH2 680 aaPredicted RBP12.29□□□□□ -0.44
SNX29-202ENST00000563308 FAM178BQ8IXR5 827 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 TMEM199Q8N511 208 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 MAGEB6Q8N7X4 407 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 MIGA1Q8NAN2 632 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 WDR18Q9BV38 432 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 ASCC2Q9H1I8 757 aaPredicted RBP12.29□□□□□ -0.44
SNX29-202ENST00000563308 SAP30BPQ9UHR5 308 aaKnown RBP12.29□□□□□ -0.44
SNX29-202ENST00000563308 DDX19BQ9UMR2 479 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 MTCH2Q9Y6C9 303 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
SNX29-202ENST00000563308 MAP2K5Q13163 448 aa12.28□□□□□ -0.44
SNX29-202ENST00000563308 PKN1Q16512 942 aa12.28□□□□□ -0.44
SNX29-202ENST00000563308 HSP90AB4PQ58FF6 505 aa12.28□□□□□ -0.44
SNX29-202ENST00000563308 TMEM240Q5SV17 173 aa12.28□□□□□ -0.44
SNX29-202ENST00000563308 HFE2Q6ZVN8 426 aa12.28□□□□□ -0.44
SNX29-202ENST00000563308 RIOK1Q9BRS2 568 aaKnown RBP12.28□□□□□ -0.44
SNX29-202ENST00000563308 TBC1D2Q9BYX2 928 aa12.28□□□□□ -0.44
SNX29-202ENST00000563308 FOCADQ5VW36 1801 aa12.27□□□□□ -0.44
SNX29-202ENST00000563308 TIMP1P01033 207 aa12.27□□□□□ -0.45
SNX29-202ENST00000563308 POU3F3P20264 500 aaPredicted RBP12.27□□□□□ -0.45
SNX29-202ENST00000563308 WDR78Q5VTH9 848 aa12.27□□□□□ -0.45
SNX29-202ENST00000563308 MFSD5Q6N075 450 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms