RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 COG2Q14746 738 aa18.26■□□□□ 0.51
LPCAT4-204ENST00000563240 LRRFIP1Q32MZ4 808 aaKnown RBP18.26■□□□□ 0.51
LPCAT4-204ENST00000563240 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
LPCAT4-204ENST00000563240 DPF3Q92784 378 aa18.26■□□□□ 0.51
LPCAT4-204ENST00000563240 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.51
LPCAT4-204ENST00000563240 MKNK2Q9HBH9 465 aa18.26■□□□□ 0.51
LPCAT4-204ENST00000563240 EPB41L4AQ9HCS5 686 aaPredicted RBP18.26■□□□□ 0.51
LPCAT4-204ENST00000563240 TMX2Q9Y320 296 aa18.26■□□□□ 0.51
LPCAT4-204ENST00000563240 FARP2O94887 1054 aaPredicted RBP18.25■□□□□ 0.51
LPCAT4-204ENST00000563240 HDAC1Q13547 482 aaPredicted RBP18.25■□□□□ 0.51
LPCAT4-204ENST00000563240 CCL14Q16627 93 aa18.25■□□□□ 0.51
LPCAT4-204ENST00000563240 SBK1Q52WX2 424 aa18.25■□□□□ 0.51
LPCAT4-204ENST00000563240 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
LPCAT4-204ENST00000563240 GCC1Q96CN9 775 aa18.25■□□□□ 0.51
LPCAT4-204ENST00000563240 SH2D4AQ9H788 454 aa18.25■□□□□ 0.51
LPCAT4-204ENST00000563240 KANSL2Q9H9L4 492 aa18.25■□□□□ 0.51
LPCAT4-204ENST00000563240 HOXC10Q9NYD6 342 aa18.25■□□□□ 0.51
LPCAT4-204ENST00000563240 BRCA2P51587 3418 aa18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 MYH7P12883 1935 aa18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 PATL2C9JE40 543 aaKnown RBP18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 PRDM1O75626 825 aa18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 FLOT1O75955 427 aa18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 GNAT2P19087 354 aa18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 RGS2P41220 211 aa18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 MORN1Q5T089 497 aa18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 GIMAP6Q6P9H5 292 aa18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 HMX1Q9NP08 348 aaPredicted RBP18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 PAK6Q9NQU5 681 aaPredicted RBP18.24■□□□□ 0.51
LPCAT4-204ENST00000563240 RPTORQ8N122 1335 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 PRKAR2AP13861 404 aaKnown RBP18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 ZKSCAN1P17029 563 aaPredicted RBP18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 RASA1P20936 1047 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 PLS1Q14651 629 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 LBX2Q6XYB7 198 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 IFNL3Q8IZI9 196 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 EXOC6Q8TAG9 804 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 LPAR1Q92633 364 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 USP6NLQ92738 828 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 LNPKQ9C0E8 428 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 IVNS1ABPQ9Y6Y0 642 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 MKI67P46013 3256 aaKnown RBP18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
LPCAT4-204ENST00000563240 XRCC5P13010 732 aaKnown RBP18.22■□□□□ 0.51
LPCAT4-204ENST00000563240 PTPREP23469 700 aa18.22■□□□□ 0.51
LPCAT4-204ENST00000563240 PDE1AP54750 535 aa18.22■□□□□ 0.51
LPCAT4-204ENST00000563240 ZMYM1Q5SVZ6 1142 aa18.22■□□□□ 0.51
LPCAT4-204ENST00000563240 CCDC129Q6ZRS4 1044 aa18.22■□□□□ 0.51
LPCAT4-204ENST00000563240 ZNF444Q8N0Y2 327 aaPredicted RBP18.22■□□□□ 0.51
LPCAT4-204ENST00000563240 ATG4CQ96DT6 458 aa18.22■□□□□ 0.51
LPCAT4-204ENST00000563240 MOV10L1Q9BXT6 1211 aaKnown RBP18.22■□□□□ 0.51
LPCAT4-204ENST00000563240 NACAP1Q9BZK3 213 aa18.22■□□□□ 0.51
LPCAT4-204ENST00000563240 H0YGN5 161 aa18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 DSG3P32926 999 aa18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 MAP2K5Q13163 448 aa18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 UBE2Q1Q7Z7E8 422 aa18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 APBA2Q99767 749 aa18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 CRISPLD2Q9H0B8 497 aa18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 GOPCQ9HD26 462 aa18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 FBXO28Q9NVF7 368 aa18.21■□□□□ 0.51
LPCAT4-204ENST00000563240 IGHDP01880 384 aa18.2■□□□□ 0.5
LPCAT4-204ENST00000563240 CACNB2Q08289 660 aaPredicted RBP18.2■□□□□ 0.5
LPCAT4-204ENST00000563240 EVI5LQ96CN4 794 aa18.2■□□□□ 0.5
LPCAT4-204ENST00000563240 PAWRQ96IZ0 340 aaKnown RBP18.2■□□□□ 0.5
LPCAT4-204ENST00000563240 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
LPCAT4-204ENST00000563240 HTATIP2Q9BUP3 242 aa18.2■□□□□ 0.5
LPCAT4-204ENST00000563240 SPATC1LQ9H0A9 340 aa18.2■□□□□ 0.5
LPCAT4-204ENST00000563240 NAPBQ9H115 298 aa18.2■□□□□ 0.5
LPCAT4-204ENST00000563240 STAP2Q9UGK3 403 aa18.2■□□□□ 0.5
LPCAT4-204ENST00000563240 PLXNB2O15031 1838 aa18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 SLC15A5A6NIM6 579 aa18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 ERCC3P19447 782 aa18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 CCND3P30281 292 aaPredicted RBP18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 FAM83BQ5T0W9 1011 aa18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 MAP3K21Q5TCX8 1036 aa18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 NCAPG2Q86XI2 1143 aa18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 TRMT44Q8IYL2 757 aaKnown RBP18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 NPLOC4Q8TAT6 608 aa18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 DIS3LQ8TF46 1054 aaKnown RBP18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 FLRT1Q9NZU1 646 aa18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
LPCAT4-204ENST00000563240 TRIM6-TRIM34B2RNG4 842 aa18.18■□□□□ 0.5
LPCAT4-204ENST00000563240 PPARAQ07869 468 aa18.18■□□□□ 0.5
LPCAT4-204ENST00000563240 DPP9Q86TI2 863 aa18.18■□□□□ 0.5
LPCAT4-204ENST00000563240 ZNF287Q9HBT7 754 aa18.18■□□□□ 0.5
LPCAT4-204ENST00000563240 MYH8P13535 1937 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 F5H6K3 240 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 KLRC3Q07444 240 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 AAMPQ13685 434 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 GRB14Q14449 540 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 FAM47AQ5JRC9 791 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 VPS53Q5VIR6 699 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 MFSD14CQ5VZR4 134 aa18.17■□□□□ 0.5
LPCAT4-204ENST00000563240 MB21D1Q8N884 522 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms