RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 EPB41L4AQ9HCS5 686 aaPredicted RBP13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 SWAP70Q9UH65 585 aa13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 RPTORQ8N122 1335 aa13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 MYH8P13535 1937 aa13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 ALPK3Q96L96 1907 aa13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 GSG1L2A8MUP6 293 aa13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 XRCC5P13010 732 aaKnown RBP13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 CCND3P30281 292 aaPredicted RBP13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 CACNB2Q08289 660 aaPredicted RBP13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 WDR78Q5VTH9 848 aa13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 PI4K2BQ8TCG2 481 aa13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 GTF3C2Q8WUA4 911 aaPredicted RBP13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 PAWRQ96IZ0 340 aaKnown RBP13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 SEC62Q99442 399 aaKnown RBP13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 APBA2Q99767 749 aa13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 TANGO6Q9C0B7 1094 aa13.29□□□□□ -0.28
KLHDC4-209ENST00000562872 RNF113AO15541 343 aaKnown RBP13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 RGS2P41220 211 aa13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 MAP2K5Q13163 448 aa13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 ZSCAN25Q6NSZ9 544 aa13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 CCAR1Q8IX12 1150 aaKnown RBP13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 NPLOC4Q8TAT6 608 aa13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 APPBP2Q92624 585 aa13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 ATG4CQ96DT6 458 aa13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 MOV10L1Q9BXT6 1211 aaKnown RBP13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 VCPKMTQ9H867 229 aa13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 HMX1Q9NP08 348 aaPredicted RBP13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 TMX2Q9Y320 296 aa13.28□□□□□ -0.28
KLHDC4-209ENST00000562872 GREB1LQ9C091 1923 aaPredicted RBP13.27□□□□□ -0.28
KLHDC4-209ENST00000562872 GPAA1O43292 621 aa13.27□□□□□ -0.29
KLHDC4-209ENST00000562872 RASA1P20936 1047 aa13.27□□□□□ -0.29
KLHDC4-209ENST00000562872 PTPREP23469 700 aa13.27□□□□□ -0.29
KLHDC4-209ENST00000562872 FXR1P51114 621 aaKnown RBP eCLIP13.27□□□□□ -0.29
KLHDC4-209ENST00000562872 GRB14Q14449 540 aa13.27□□□□□ -0.29
KLHDC4-209ENST00000562872 SAMD1Q6SPF0 538 aaPredicted RBP13.27□□□□□ -0.29
KLHDC4-209ENST00000562872 FBXO28Q9NVF7 368 aa13.27□□□□□ -0.29
KLHDC4-209ENST00000562872 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
KLHDC4-209ENST00000562872 PARP14Q460N5 1801 aa13.27□□□□□ -0.29
KLHDC4-209ENST00000562872 SLC15A5A6NIM6 579 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 PFASO15067 1338 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 IGHA2P01877 340 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 DSG3P32926 999 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 CCNA1P78396 465 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 COG2Q14746 738 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 LHX8Q68G74 356 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 GPATCH3Q96I76 525 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 CCDC17Q96LX7 622 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 ROBO3Q96MS0 1386 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 HTATIP2Q9BUP3 242 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 SPATC1LQ9H0A9 340 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 TRIOBPQ9H2D6 2365 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 CWC22Q9HCG8 908 aaKnown RBP13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 ARPP21Q9UBL0 812 aaPredicted RBP13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 OGDHLQ9ULD0 1010 aa13.26□□□□□ -0.29
KLHDC4-209ENST00000562872 MINDY4BA8MYZ0 360 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 FOXP2O15409 715 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 PRDM1O75626 825 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 FLOT1O75955 427 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 ERCC3P19447 782 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 SBK1Q52WX2 424 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 AMOTL1Q8IY63 956 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 TRPV1Q8NER1 839 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 LPAR1Q92633 364 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 DDRGK1Q96HY6 314 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 NUP88Q99567 741 aaPredicted RBP13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 PRO3102Q9H379 93 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 ARHGEF10LQ9HCE6 1279 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 SZT2Q5T011 3432 aa13.25□□□□□ -0.29
KLHDC4-209ENST00000562872 TTC41PQ6P2S7 1318 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 WDR46O15213 610 aaKnown RBP13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 COBLO75128 1261 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 HOXC6P09630 235 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 MX1P20591 662 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 CYP2C19P33261 490 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 TMEM132BQ14DG7 1078 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 FAM83BQ5T0W9 1011 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 CCDC129Q6ZRS4 1044 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 NECAB2Q7Z6G3 386 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 ZNF236Q9UL36 1845 aa13.24□□□□□ -0.29
KLHDC4-209ENST00000562872 FRMPD3Q5JV73 1810 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 RAD21O60216 631 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 EVI5O60447 810 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 GLRX3O76003 335 aaKnown RBP13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 ADORA2AP29274 412 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 PLS1Q14651 629 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 GIMAP6Q6P9H5 292 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 TRMT44Q8IYL2 757 aaKnown RBP13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 C7orf61Q8IZ16 206 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 ANKLE1Q8NAG6 615 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 FSD1Q9BTV5 496 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms