RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PDE11AQ9HCR9 933 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 EPB41L4AQ9HCS5 686 aaPredicted RBP10.48□□□□□ -0.73
CDH1-205ENST00000562836 PCSK1NQ9UHG2 260 aa10.48□□□□□ -0.73
CDH1-205ENST00000562836 KIF21AQ7Z4S6 1674 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 ZNF254O75437 659 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 TMCC1O94876 653 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 PCP11498 1178 aaKnown RBP10.47□□□□□ -0.73
CDH1-205ENST00000562836 DDX5P17844 614 aaKnown RBP10.47□□□□□ -0.73
CDH1-205ENST00000562836 DYNC1I2Q13409 638 aaKnown RBP10.47□□□□□ -0.73
CDH1-205ENST00000562836 TNIP1Q15025 636 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 ZNF746Q6NUN9 644 aaPredicted RBP10.47□□□□□ -0.73
CDH1-205ENST00000562836 FAM228AQ86W67 206 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 GIPC2Q8TF65 315 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 NSMCE1Q8WV22 266 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 PLCB1Q9NQ66 1216 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 LUC7L2Q9Y383 392 aaKnown RBP10.47□□□□□ -0.73
CDH1-205ENST00000562836 GMEB1Q9Y692 573 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 AP5Z1O43299 807 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 RNASEH2AO75792 299 aaKnown RBP10.47□□□□□ -0.73
CDH1-205ENST00000562836 FSBPO95073 299 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 POTEIP0CG38 1075 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 UBL4AP11441 157 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 UBASH3AP57075 661 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 UBXN2AP68543 259 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 PRKG1Q13976 671 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 PTPROQ16827 1216 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 CFAP157Q5JU67 520 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 FAM20CQ8IXL6 584 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 LRRC43Q8N309 656 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 MAIP1Q8WWC4 291 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 ACSBG1Q96GR2 724 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 FERD3LQ96RJ6 166 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 FAM117AQ9C073 453 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 FANCFQ9NPI8 374 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 RIMKLBQ9ULI2 386 aa10.47□□□□□ -0.73
CDH1-205ENST00000562836 RPRD2Q5VT52 1461 aaKnown RBP10.47□□□□□ -0.73
CDH1-205ENST00000562836 PIK3R4Q99570 1358 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 TTC34A8MYJ7 566 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
CDH1-205ENST00000562836 CHKAP35790 457 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 KLC1Q07866 573 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 GDAP1Q8TB36 358 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 FAM200AQ8TCP9 573 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 OPTNQ96CV9 577 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 MPHOSPH9Q99550 1183 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 NRDE2Q9H7Z3 1164 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 ARFGAP3Q9NP61 516 aa10.46□□□□□ -0.73
CDH1-205ENST00000562836 SCHIP1Q9P0W5 487 aaPredicted RBP10.46□□□□□ -0.73
CDH1-205ENST00000562836 LRRC72A6NJI9 287 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 A6NJR5 290 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 SPDYE16A6NNV3 312 aaPredicted RBP10.46□□□□□ -0.74
CDH1-205ENST00000562836 N4BP1O75113 896 aaKnown RBP10.46□□□□□ -0.74
CDH1-205ENST00000562836 SYT1P21579 422 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 CES1P23141 567 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 SUZ12Q15022 739 aaKnown RBP10.46□□□□□ -0.74
CDH1-205ENST00000562836 SKIV2LQ15477 1246 aaKnown RBP10.46□□□□□ -0.74
CDH1-205ENST00000562836 WHAMMP3Q1A5X7 153 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 BOLA3Q53S33 107 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 PDXDC1Q6P996 788 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 RSPH3Q86UC2 560 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 TEKT4Q8WW24 435 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 SCG3Q8WXD2 468 aaKnown RBP10.46□□□□□ -0.74
CDH1-205ENST00000562836 GLMNQ92990 594 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 DDX27Q96GQ7 796 aaKnown RBP10.46□□□□□ -0.74
CDH1-205ENST00000562836 UTP14AQ9BVJ6 771 aaKnown RBP10.46□□□□□ -0.74
CDH1-205ENST00000562836 CCSER1Q9C0I3 900 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 DRC3Q9H069 523 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 CNNM2Q9H8M5 875 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 POLA1P09884 1462 aaPredicted RBP10.46□□□□□ -0.74
CDH1-205ENST00000562836 ANKRD36BQ8N2N9 1353 aa10.46□□□□□ -0.74
CDH1-205ENST00000562836 USP27XA6NNY8 438 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 COL6A1P12109 1028 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 HCLS1P14317 486 aaPredicted RBP10.45□□□□□ -0.74
CDH1-205ENST00000562836 SAFBQ15424 915 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDH1-205ENST00000562836 FAM209AQ5JX71 171 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 HDGFL2Q7Z4V5 671 aaPredicted RBP10.45□□□□□ -0.74
CDH1-205ENST00000562836 EXOC3L1Q86VI1 746 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 SLAIN1Q8ND83 568 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 SH3GLB1Q9Y371 365 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 MYPNQ86TC9 1320 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 MIA2Q96PC5 1412 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 TEX14Q8IWB6 1497 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 TTI1O43156 1089 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 HNRNPCP07910 306 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDH1-205ENST00000562836 TCF3P15923 654 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 BPIFB3P59826 476 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 GSTM4Q03013 218 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 CCDC40Q4G0X9 1142 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 CCDC122Q5T0U0 273 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 TMTC4Q5T4D3 741 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 NUTM2DQ5VT03 806 aaPredicted RBP10.45□□□□□ -0.74
CDH1-205ENST00000562836 PPFIBP1Q86W92 1011 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 SMC1BQ8NDV3 1235 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 MTMR12Q9C0I1 747 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 EPC1Q9H2F5 836 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 GPR108Q9NPR9 543 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 RRP7BPQ9NSQ0 103 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 TYW1Q9NV66 732 aaKnown RBP10.45□□□□□ -0.74
CDH1-205ENST00000562836 WDR35Q9P2L0 1181 aa10.45□□□□□ -0.74
CDH1-205ENST00000562836 HOOK1Q9UJC3 728 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms