RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ADALQ6DHV7 355 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 TRIM47Q96LD4 638 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 SPON1Q9HCB6 807 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 KCNH3Q9ULD8 1083 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 TCP10L2B9ZVM9 353 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 POTEJP0CG39 1038 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 CCDC40Q4G0X9 1142 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 LRCH2Q5VUJ6 765 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 PANK2Q9BZ23 570 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 DCP1AQ9NPI6 582 aaPredicted RBP8.51□□□□□ -1.05
TCF4-216ENST00000562680 ARGLU1Q9NWB6 273 aaPredicted RBP8.51□□□□□ -1.05
TCF4-216ENST00000562680 RABGAP1Q9Y3P9 1069 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 RGPD8O14715 1765 aaPredicted RBP8.51□□□□□ -1.05
TCF4-216ENST00000562680 PRPF3O43395 683 aaKnown RBP8.51□□□□□ -1.05
TCF4-216ENST00000562680 ODF2Q5BJF6 829 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 GOLGA6L9A6NEM1 432 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 SMCO2A6NFE2 343 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 BIN1O00499 593 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 ZNF174Q15697 407 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 SV2BQ7L1I2 683 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 TDRD7Q8NHU6 1098 aaKnown RBP8.51□□□□□ -1.05
TCF4-216ENST00000562680 AMNQ9BXJ7 453 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 UBA5Q9GZZ9 404 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 ZSWIM5Q9P217 1185 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 A0A1W2PQ27 194 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 A0A1W2PQ64 194 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 A0A1W2PQD8 194 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 ERICH4A6NGS2 130 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 HOXA7P31268 230 aaPredicted RBP8.51□□□□□ -1.05
TCF4-216ENST00000562680 CDK8P49336 464 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 HHIPL2Q6UWX4 724 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 FAM160B2Q86V87 743 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 FBXO11Q86XK2 927 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 CCDC65Q8IXS2 484 aa8.51□□□□□ -1.05
TCF4-216ENST00000562680 CCAR2Q8N163 923 aaKnown RBP8.51□□□□□ -1.05
TCF4-216ENST00000562680 NSUN4Q96CB9 384 aaKnown RBP8.51□□□□□ -1.05
TCF4-216ENST00000562680 CACNA1FO60840 1977 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 VWA3AA6NCI4 1184 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 SGMS1Q86VZ5 419 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 MB21D2Q8IYB1 491 aaPredicted RBP8.5□□□□□ -1.05
TCF4-216ENST00000562680 NT5C3AQ9H0P0 336 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 VPS54Q9P1Q0 977 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 AHDC1Q5TGY3 1603 aaPredicted RBP8.5□□□□□ -1.05
TCF4-216ENST00000562680 KDM3AQ9Y4C1 1321 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 ASNSP08243 561 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 GCFC2P16383 781 aaKnown RBP8.5□□□□□ -1.05
TCF4-216ENST00000562680 MATR3P43243 847 aaKnown RBP eCLIP8.5□□□□□ -1.05
TCF4-216ENST00000562680 GSG1L2A8MUP6 293 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 RAD17O75943 681 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 AFMP43652 599 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 ZNF445P59923 1031 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 PLS1Q14651 629 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 ANO6Q4KMQ2 910 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 HS2ST1Q7LGA3 356 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 CACNA2D4Q7Z3S7 1137 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 CCDC112Q8NEF3 446 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 MAGEF1Q9HAY2 307 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 RRAGDQ9NQL2 400 aaPredicted RBP8.5□□□□□ -1.05
TCF4-216ENST00000562680 TERF1P54274 439 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 MLKLQ8NB16 471 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 SCLT1Q96NL6 688 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 SH3GLB2Q9NR46 395 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 RTEL1Q9NZ71 1219 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 HERC5Q9UII4 1024 aaKnown RBP8.5□□□□□ -1.05
TCF4-216ENST00000562680 ZNRF3Q9ULT6 936 aa8.5□□□□□ -1.05
TCF4-216ENST00000562680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.5□□□□□ -1.05
TCF4-216ENST00000562680 CCDC172P0C7W6 258 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 FGFR2P21802 821 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 SCARF1Q14162 830 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 JAKMIP3Q5VZ66 844 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 FMNL3Q8IVF7 1028 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 SYCP3Q8IZU3 236 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 LMBRD1Q9NUN5 540 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 MYO6Q9UM54 1294 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 SALL3Q9BXA9 1300 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 MYCNP04198 464 aaPredicted RBP8.49□□□□□ -1.05
TCF4-216ENST00000562680 DESP17661 470 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 KRT26Q7Z3Y9 468 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 NEK8Q86SG6 692 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 DCAF4Q8WV16 495 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 POLR3EQ9NVU0 708 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 LRWD1Q9UFC0 647 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 IVNS1ABPQ9Y6Y0 642 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 CMA1P23946 247 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 APOBEC3FQ8IUX4 373 aaKnown RBP8.49□□□□□ -1.05
TCF4-216ENST00000562680 PSTPIP2Q9H939 334 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 KCNJ14Q9UNX9 436 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 ROBO1Q9Y6N7 1651 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 ENTPD3O75355 529 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 FAM13AO94988 1023 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 PPP4CP60510 307 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 SPA17Q15506 151 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 CALCRLQ16602 461 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 OTUD7BQ6GQQ9 843 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 NLRX1Q86UT6 975 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 RGS22Q8NE09 1264 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 SH3RF3Q8TEJ3 882 aaPredicted RBP8.49□□□□□ -1.05
TCF4-216ENST00000562680 N4BP3O15049 544 aa8.49□□□□□ -1.05
TCF4-216ENST00000562680 RPL13P26373 211 aaKnown RBP8.49□□□□□ -1.05
TCF4-216ENST00000562680 HOXA10P31260 410 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms