RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 NTRK3Q16288 839 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 RTN1Q16799 776 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 DPCR1Q3MIW9 517 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 MSS51Q4VC12 460 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 NT5DC1Q5TFE4 455 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 TMC6Q7Z403 805 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
CFDP1-202ENST00000562602 TBC1D10CQ8IV04 446 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 ESR2Q92731 530 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 TUBB2BQ9BVA1 445 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 RNF26Q9BY78 433 aaPredicted RBP8.57□□□□□ -1.04
CFDP1-202ENST00000562602 XPO4Q9C0E2 1151 aaKnown RBP8.57□□□□□ -1.04
CFDP1-202ENST00000562602 L2HGDHQ9H9P8 463 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 RBM28Q9NW13 759 aaKnown RBP8.57□□□□□ -1.04
CFDP1-202ENST00000562602 RGS17Q9UGC6 210 aaPredicted RBP8.57□□□□□ -1.04
CFDP1-202ENST00000562602 ANAPC4Q9UJX5 808 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 ASAP1Q9ULH1 1129 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 ZNF652Q9Y2D9 606 aa8.57□□□□□ -1.04
CFDP1-202ENST00000562602 B4E1Z4 1266 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 KIF28PB7ZC32 967 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 WDHD1O75717 1129 aaPredicted RBP8.56□□□□□ -1.04
CFDP1-202ENST00000562602 KIF20AO95235 890 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 TOP1P11387 765 aaKnown RBP8.56□□□□□ -1.04
CFDP1-202ENST00000562602 TDO2P48775 406 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 HLFQ16534 295 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 PKDCCQ504Y2 493 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 OTUD7BQ6GQQ9 843 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 CYB5R4Q7L1T6 521 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 NBPF11Q86T75 865 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 MICU3Q86XE3 530 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 NUTM2AQ8IVF1 878 aaPredicted RBP8.56□□□□□ -1.04
CFDP1-202ENST00000562602 VSTM4Q8IW00 320 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 FAM177A1Q8N128 213 aaPredicted RBP8.56□□□□□ -1.04
CFDP1-202ENST00000562602 MAGEB6Q8N7X4 407 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 ENOX1Q8TC92 643 aaKnown RBP8.56□□□□□ -1.04
CFDP1-202ENST00000562602 ZNF592Q92610 1267 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 SMARCE1Q969G3 411 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 FERMT2Q96AC1 680 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 CTAGE1Q96RT6 745 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 UBAC1Q9BSL1 405 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 NAA15Q9BXJ9 866 aaKnown RBP8.56□□□□□ -1.04
CFDP1-202ENST00000562602 SLC26A6Q9BXS9 759 aa8.56□□□□□ -1.04
CFDP1-202ENST00000562602 ARGLU1Q9NWB6 273 aaPredicted RBP8.56□□□□□ -1.04
CFDP1-202ENST00000562602 THRAP3Q9Y2W1 955 aaKnown RBP8.56□□□□□ -1.04
CFDP1-202ENST00000562602 SRPRBQ9Y5M8 271 aaKnown RBP8.56□□□□□ -1.04
CFDP1-202ENST00000562602 UBN2Q6ZU65 1347 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 DISP2A7MBM2 1401 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 A0A0G2JLW4 131 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 ATP8B1O43520 1251 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 STX10O60499 249 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 MBD4O95243 580 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 GPTP24298 496 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 MARCKSP29966 332 aaPredicted RBP8.55□□□□□ -1.04
CFDP1-202ENST00000562602 PHKA1P46020 1223 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 EIF5P55010 431 aaKnown RBP8.55□□□□□ -1.04
CFDP1-202ENST00000562602 ETF1P62495 437 aaKnown RBP8.55□□□□□ -1.04
CFDP1-202ENST00000562602 DMTNQ08495 405 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 CFAP100Q494V2 611 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 CCDC178Q5BJE1 867 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 SHC4Q6S5L8 630 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 CRACR2BQ8N4Y2 399 aaPredicted RBP8.55□□□□□ -1.04
CFDP1-202ENST00000562602 FANCBQ8NB91 859 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 SMARCC1Q92922 1105 aaPredicted RBP8.55□□□□□ -1.04
CFDP1-202ENST00000562602 REPIN1Q9BWE0 567 aaKnown RBP8.55□□□□□ -1.04
CFDP1-202ENST00000562602 TMX1Q9H3N1 280 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
CFDP1-202ENST00000562602 DDX41Q9UJV9 622 aaKnown RBP8.55□□□□□ -1.04
CFDP1-202ENST00000562602 NEDD4P46934 1319 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 PDS5AQ29RF7 1337 aaKnown RBP8.54□□□□□ -1.04
CFDP1-202ENST00000562602 LRP5O75197 1615 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 FAM187AA6NFU0 413 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 TRIM75PA6NK02 468 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 GSG1L2A8MUP6 293 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 PRPF3O43395 683 aaKnown RBP8.54□□□□□ -1.04
CFDP1-202ENST00000562602 DDAH1O94760 285 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 CDK11BP21127 795 aaKnown RBP8.54□□□□□ -1.04
CFDP1-202ENST00000562602 CDC27P30260 824 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 TRAPPC10P48553 1259 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 MMP16P51512 607 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 FOXC1Q12948 553 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 UBE4AQ14139 1066 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 BMS1Q14692 1282 aaKnown RBP8.54□□□□□ -1.04
CFDP1-202ENST00000562602 POSTNQ15063 836 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 FILIP1LQ4L180 1135 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 TAF3Q5VWG9 929 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 ARMCX5Q6P1M9 558 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 CLEC4GQ6UXB4 293 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 CATIPQ7Z7H3 387 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 IQCA1Q86XH1 822 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 HOMER1Q86YM7 354 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 DIS3L2Q8IYB7 885 aaKnown RBP8.54□□□□□ -1.04
CFDP1-202ENST00000562602 KRT222Q8N1A0 295 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 CCDC51Q96ER9 411 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 PPP1R13BQ96KQ4 1090 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 CCDC85AQ96PX6 553 aaPredicted RBP8.54□□□□□ -1.04
CFDP1-202ENST00000562602 BRIP1Q9BX63 1249 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
CFDP1-202ENST00000562602 CCDC87Q9NVE4 849 aa8.54□□□□□ -1.04
CFDP1-202ENST00000562602 TOR4AQ9NXH8 423 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms