RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 PPM1GO15355 546 aaPredicted RBP8.1□□□□□ -1.11
TCF4-213ENST00000562543 BMP4P12644 408 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 KCNQ1P51787 676 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 PGBD3Q8N328 593 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 BANK1Q8NDB2 785 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 GMLQ99445 158 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 GGA1Q9UJY5 639 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 MKL2Q9ULH7 1088 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 PHF24Q9UPV7 400 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 TRANK1O15050 2925 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 AMPD1P23109 780 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 TNNT2P45379 298 aaPredicted RBP8.09□□□□□ -1.11
TCF4-213ENST00000562543 TFF2Q03403 129 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 ACAP1Q15027 740 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 C17orf99Q6UX52 265 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 LINC00114Q6XXX2 140 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 MYO9BQ13459 2157 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 NCOR2Q9Y618 2525 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 SIPA1L3O60292 1781 aaPredicted RBP8.09□□□□□ -1.11
TCF4-213ENST00000562543 ACACBO00763 2458 aa8.09□□□□□ -1.11
TCF4-213ENST00000562543 CCL15-CCL14A0A0B4J2E2 113 aa8.08□□□□□ -1.12
TCF4-213ENST00000562543 K7ELQ4 463 aaPredicted RBP8.08□□□□□ -1.12
TCF4-213ENST00000562543 RNMTO43148 476 aaKnown RBP8.08□□□□□ -1.12
TCF4-213ENST00000562543 FGFR3P22607 806 aa8.08□□□□□ -1.12
TCF4-213ENST00000562543 PDE3AQ14432 1141 aa8.08□□□□□ -1.12
TCF4-213ENST00000562543 CCL15Q16663 113 aa8.08□□□□□ -1.12
TCF4-213ENST00000562543 ZBTB38Q8NAP3 1195 aaPredicted RBP8.08□□□□□ -1.12
TCF4-213ENST00000562543 LBHD1Q9BQE6 289 aaPredicted RBP8.08□□□□□ -1.12
TCF4-213ENST00000562543 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.08□□□□□ -1.12
TCF4-213ENST00000562543 NDFIP2Q9NV92 336 aa8.08□□□□□ -1.12
TCF4-213ENST00000562543 CHD7Q9P2D1 2997 aa8.08□□□□□ -1.12
TCF4-213ENST00000562543 PTPRZ1P23471 2315 aaPredicted RBP8.08□□□□□ -1.12
TCF4-213ENST00000562543 ROCK2O75116 1388 aaKnown RBP8.08□□□□□ -1.12
TCF4-213ENST00000562543 WNT10BO00744 389 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 PPP1R12BO60237 982 aaPredicted RBP8.07□□□□□ -1.12
TCF4-213ENST00000562543 ADCY3O60266 1144 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 WDHD1O75717 1129 aaPredicted RBP8.07□□□□□ -1.12
TCF4-213ENST00000562543 BBOX1O75936 387 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 ELNP15502 786 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 PIP4K2AP48426 406 aaPredicted RBP8.07□□□□□ -1.12
TCF4-213ENST00000562543 TLR1Q15399 786 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 HLFQ16534 295 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 LRRC26Q2I0M4 334 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 AAK1Q2M2I8 961 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 TTC5Q8N0Z6 440 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 PHTF2Q8N3S3 785 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 GOLGA6L1Q8N7Z2 621 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 ZNF592Q92610 1267 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 UIMC1Q96RL1 719 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 ZCCHC17Q9NP64 241 aaKnown RBP8.07□□□□□ -1.12
TCF4-213ENST00000562543 GDF2Q9UK05 429 aaPredicted RBP8.07□□□□□ -1.12
TCF4-213ENST00000562543 HCN2Q9UL51 889 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 ATXN7L1Q9ULK2 861 aaPredicted RBP8.07□□□□□ -1.12
TCF4-213ENST00000562543 GABRQQ9UN88 632 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 DOLKQ9UPQ8 538 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 MAST4O15021 2626 aa8.07□□□□□ -1.12
TCF4-213ENST00000562543 COL6A1P12109 1028 aa8.06□□□□□ -1.12
TCF4-213ENST00000562543 PLA2G4AP47712 749 aa8.06□□□□□ -1.12
TCF4-213ENST00000562543 ADGRE1Q14246 886 aa8.06□□□□□ -1.12
TCF4-213ENST00000562543 CCDC85BQ15834 202 aaPredicted RBP8.06□□□□□ -1.12
TCF4-213ENST00000562543 EFHC2Q5JST6 749 aa8.06□□□□□ -1.12
TCF4-213ENST00000562543 PPARGC1BQ86YN6 1023 aaKnown RBP8.06□□□□□ -1.12
TCF4-213ENST00000562543 APOBEC3FQ8IUX4 373 aaKnown RBP8.06□□□□□ -1.12
TCF4-213ENST00000562543 AEBP1Q8IUX7 1158 aa8.06□□□□□ -1.12
TCF4-213ENST00000562543 RHBDD1Q8TEB9 315 aa8.06□□□□□ -1.12
TCF4-213ENST00000562543 ZNF576Q9H609 170 aa8.06□□□□□ -1.12
TCF4-213ENST00000562543 ECM29Q5VYK3 1845 aa8.06□□□□□ -1.12
TCF4-213ENST00000562543 UBN2Q6ZU65 1347 aa8.05□□□□□ -1.12
TCF4-213ENST00000562543 NEURL1BA8MQ27 555 aa8.05□□□□□ -1.12
TCF4-213ENST00000562543 GTF2A2P52657 109 aa8.05□□□□□ -1.12
TCF4-213ENST00000562543 USP4Q13107 963 aa8.05□□□□□ -1.12
TCF4-213ENST00000562543 ANKRD13AQ8IZ07 590 aa8.05□□□□□ -1.12
TCF4-213ENST00000562543 BTBD6Q96KE9 485 aa8.05□□□□□ -1.12
TCF4-213ENST00000562543 ZCCHC2Q9C0B9 1178 aaKnown RBP8.05□□□□□ -1.12
TCF4-213ENST00000562543 FAM208BQ5VWN6 2430 aa8.05□□□□□ -1.12
TCF4-213ENST00000562543 MAP1BP46821 2468 aaKnown RBP8.04□□□□□ -1.12
TCF4-213ENST00000562543 MED19A0JLT2 244 aaPredicted RBP8.04□□□□□ -1.12
TCF4-213ENST00000562543 NTSR2O95665 410 aa8.04□□□□□ -1.12
TCF4-213ENST00000562543 IRF5Q13568 498 aa8.04□□□□□ -1.12
TCF4-213ENST00000562543 LBRQ14739 615 aaKnown RBP8.04□□□□□ -1.12
TCF4-213ENST00000562543 ELP3Q9H9T3 547 aa8.04□□□□□ -1.12
TCF4-213ENST00000562543 CD320Q9NPF0 282 aa8.04□□□□□ -1.12
TCF4-213ENST00000562543 DNAAF2Q9NVR5 837 aaKnown RBP8.04□□□□□ -1.12
TCF4-213ENST00000562543 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
TCF4-213ENST00000562543 POLLQ9UGP5 575 aa8.04□□□□□ -1.12
TCF4-213ENST00000562543 CPA4Q9UI42 421 aa8.04□□□□□ -1.12
TCF4-213ENST00000562543 OGDHLQ9ULD0 1010 aa8.04□□□□□ -1.12
TCF4-213ENST00000562543 USP24Q9UPU5 2620 aa8.04□□□□□ -1.12
TCF4-213ENST00000562543 ZNF292O60281 2723 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 FAM186AA6NE01 2351 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 C1QTNF9BB2RNN3 333 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 BTBD19C9JJ37 291 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 ERC2O15083 957 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 U2AF1L5P0DN76 240 aaPredicted RBP8.03□□□□□ -1.12
TCF4-213ENST00000562543 EPXP11678 715 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 ID4P47928 161 aa8.03□□□□□ -1.12
TCF4-213ENST00000562543 IREB2P48200 963 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms