RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 TTBK2Q6IQ55 1244 aa9.16□□□□□ -0.94
LINC01243-201ENST00000562065 FLAD1Q8NFF5 587 aa9.16□□□□□ -0.94
LINC01243-201ENST00000562065 ANKRD24Q8TF21 1146 aa9.16□□□□□ -0.94
LINC01243-201ENST00000562065 SLC38A3Q99624 504 aa9.16□□□□□ -0.94
LINC01243-201ENST00000562065 NPATQ14207 1427 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 ARID1BQ8NFD5 2236 aaPredicted RBP9.15□□□□□ -0.94
LINC01243-201ENST00000562065 LRRC10BA6NIK2 292 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 PRR33A8MZF0 331 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 CEBPAP49715 358 aaPredicted RBP9.15□□□□□ -0.94
LINC01243-201ENST00000562065 KCNA1Q09470 495 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 SFRP5Q5T4F7 317 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 SV2BQ7L1I2 683 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 XAGE3Q8WTP9 111 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 HSPA12BQ96MM6 686 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 WNT10AQ9GZT5 417 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 CARS2Q9HA77 564 aaKnown RBP9.15□□□□□ -0.94
LINC01243-201ENST00000562065 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
LINC01243-201ENST00000562065 NEURL4Q96JN8 1562 aa9.15□□□□□ -0.95
LINC01243-201ENST00000562065 PLEKHH2Q8IVE3 1493 aa9.15□□□□□ -0.95
LINC01243-201ENST00000562065 PTPRTO14522 1441 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 H3BS24 57 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 EIF4BP23588 611 aaKnown RBP9.14□□□□□ -0.95
LINC01243-201ENST00000562065 FGD1P98174 961 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 SLBPQ14493 270 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC01243-201ENST00000562065 NKG7Q16617 165 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 MFSD4AQ8N468 514 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 GAL3ST3Q96A11 431 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 ATP13A1Q9HD20 1204 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 A2MP01023 1474 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 IQSEC2Q5JU85 1478 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 KIAA1107Q9UPP5 1409 aa9.14□□□□□ -0.95
LINC01243-201ENST00000562065 DNMT1P26358 1616 aaKnown RBP9.13□□□□□ -0.95
LINC01243-201ENST00000562065 RNF17Q9BXT8 1623 aaKnown RBP9.13□□□□□ -0.95
LINC01243-201ENST00000562065 CDK8P49336 464 aa9.13□□□□□ -0.95
LINC01243-201ENST00000562065 CCDC85BQ15834 202 aaPredicted RBP9.13□□□□□ -0.95
LINC01243-201ENST00000562065 MLANAQ16655 118 aa9.13□□□□□ -0.95
LINC01243-201ENST00000562065 CTNND2Q9UQB3 1225 aa9.13□□□□□ -0.95
LINC01243-201ENST00000562065 FAM135AQ9P2D6 1515 aa9.13□□□□□ -0.95
LINC01243-201ENST00000562065 TCOF1Q13428 1488 aaKnown RBP9.13□□□□□ -0.95
LINC01243-201ENST00000562065 CROCC2H7BZ55 1655 aa9.13□□□□□ -0.95
LINC01243-201ENST00000562065 ZC3H13Q5T200 1668 aaKnown RBP9.13□□□□□ -0.95
LINC01243-201ENST00000562065 CBX7O95931 251 aa9.12□□□□□ -0.95
LINC01243-201ENST00000562065 SEPT6Q14141 434 aa9.12□□□□□ -0.95
LINC01243-201ENST00000562065 HID1Q8IV36 788 aa9.12□□□□□ -0.95
LINC01243-201ENST00000562065 MFSD2AQ8NA29 543 aa9.12□□□□□ -0.95
LINC01243-201ENST00000562065 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC01243-201ENST00000562065 SNCAIPQ9Y6H5 919 aa9.12□□□□□ -0.95
LINC01243-201ENST00000562065 PLA2R1Q13018 1463 aa9.12□□□□□ -0.95
LINC01243-201ENST00000562065 MBD5Q9P267 1494 aa9.12□□□□□ -0.95
LINC01243-201ENST00000562065 KDM5DQ9BY66 1539 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 CNTNAP4Q9C0A0 1308 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 CAMSAP2Q08AD1 1489 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 DBX1A6NMT0 343 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 GRK4P32298 578 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 AFMP43652 599 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 MAP3K11Q16584 847 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 PRAMEF13Q5VWM6 474 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 LETMD1Q6P1Q0 360 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 FRMD6Q96NE9 622 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 PTPRKQ15262 1439 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 CEP162Q5TB80 1403 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 ARHGEF5Q12774 1597 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 CEP152O94986 1710 aa9.11□□□□□ -0.95
LINC01243-201ENST00000562065 MROH1Q8NDA8 1641 aa9.1□□□□□ -0.95
LINC01243-201ENST00000562065 GNA15P30679 374 aa9.1□□□□□ -0.95
LINC01243-201ENST00000562065 FYB2Q5VWT5 728 aa9.1□□□□□ -0.95
LINC01243-201ENST00000562065 RIN3Q8TB24 985 aa9.1□□□□□ -0.95
LINC01243-201ENST00000562065 LIN37Q96GY3 246 aaPredicted RBP9.1□□□□□ -0.95
LINC01243-201ENST00000562065 SEMA3GQ9NS98 782 aa9.1□□□□□ -0.95
LINC01243-201ENST00000562065 LMCD1Q9NZU5 365 aa9.1□□□□□ -0.95
LINC01243-201ENST00000562065 PCDHB5Q9Y5E4 795 aa9.1□□□□□ -0.95
LINC01243-201ENST00000562065 EIF2AK4Q9P2K8 1649 aaKnown RBP9.09□□□□□ -0.95
LINC01243-201ENST00000562065 CCDC141Q6ZP82 1450 aa9.09□□□□□ -0.95
LINC01243-201ENST00000562065 ZNF503-AS2A6NEH8 195 aa9.09□□□□□ -0.95
LINC01243-201ENST00000562065 ZNF746Q6NUN9 644 aaPredicted RBP9.09□□□□□ -0.95
LINC01243-201ENST00000562065 MPZL3Q6UWV2 235 aa9.09□□□□□ -0.95
LINC01243-201ENST00000562065 FAM84AQ96KN4 292 aa9.09□□□□□ -0.95
LINC01243-201ENST00000562065 FAM53CQ9NYF3 392 aa9.09□□□□□ -0.95
LINC01243-201ENST00000562065 CAPN6Q9Y6Q1 641 aa9.09□□□□□ -0.95
LINC01243-201ENST00000562065 MAST1Q9Y2H9 1570 aa9.08□□□□□ -0.96
LINC01243-201ENST00000562065 ZNF865P0CJ78 1059 aaPredicted RBP9.08□□□□□ -0.96
LINC01243-201ENST00000562065 NPAS4Q8IUM7 802 aa9.08□□□□□ -0.96
LINC01243-201ENST00000562065 KIRREL1Q96J84 757 aa9.08□□□□□ -0.96
LINC01243-201ENST00000562065 DPH2Q9BQC3 489 aaPredicted RBP9.08□□□□□ -0.96
LINC01243-201ENST00000562065 STRCP1A6NGW2 1772 aa9.08□□□□□ -0.96
LINC01243-201ENST00000562065 CCNB3Q8WWL7 1395 aa9.08□□□□□ -0.96
LINC01243-201ENST00000562065 NCOA2Q15596 1464 aa9.08□□□□□ -0.96
LINC01243-201ENST00000562065 SPAG9O60271 1321 aaKnown RBP9.07□□□□□ -0.96
LINC01243-201ENST00000562065 PRPF40AO75400 957 aaKnown RBP9.07□□□□□ -0.96
LINC01243-201ENST00000562065 ZSWIM5Q9P217 1185 aa9.07□□□□□ -0.96
LINC01243-201ENST00000562065 MTUS2Q5JR59 1369 aa9.07□□□□□ -0.96
LINC01243-201ENST00000562065 A2ML1A8K2U0 1454 aa9.07□□□□□ -0.96
LINC01243-201ENST00000562065 PZPP20742 1482 aa9.07□□□□□ -0.96
LINC01243-201ENST00000562065 IQGAP1P46940 1657 aa9.07□□□□□ -0.96
LINC01243-201ENST00000562065 DEPDC5O75140 1603 aa9.06□□□□□ -0.96
LINC01243-201ENST00000562065 ALKQ9UM73 1620 aa9.06□□□□□ -0.96
LINC01243-201ENST00000562065 RBAK-RBAKDNI3L0D1 243 aa9.06□□□□□ -0.96
LINC01243-201ENST00000562065 CST3P01034 146 aaPredicted RBP9.06□□□□□ -0.96
LINC01243-201ENST00000562065 PGRP06401 933 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms