RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SMIM5Q71RC9 77 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 PROM2Q8N271 834 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 TCP11Q8WWU5 503 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 HOOK2Q96ED9 719 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 PANX2Q96RD6 677 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 ACTR5Q9H9F9 607 aaPredicted RBP20.95■□□□□ 0.94
RAB40C-206ENST00000561781 POLR3DP05423 398 aaPredicted RBP20.94■□□□□ 0.94
RAB40C-206ENST00000561781 PIP4K2AP48426 406 aaPredicted RBP20.94■□□□□ 0.94
RAB40C-206ENST00000561781 TTC5Q8N0Z6 440 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 SLC35F6Q8N357 371 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 LRRC4BQ9NT99 713 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 SOWAHDA6NJG2 315 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 OPA1O60313 960 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 YEATS4O95619 227 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 NAP1L1P55209 391 aaKnown RBP20.94■□□□□ 0.94
RAB40C-206ENST00000561781 IFFO1Q0D2I5 559 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 SLC5A9Q2M3M2 681 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 BRAPQ7Z569 592 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 POLR3EQ9NVU0 708 aa20.94■□□□□ 0.94
RAB40C-206ENST00000561781 CARMIL3Q8ND23 1372 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 PI4KAP2A4QPH2 592 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 SKAP2O75563 359 aaPredicted RBP20.93■□□□□ 0.94
RAB40C-206ENST00000561781 RNF187Q5TA31 235 aaPredicted RBP20.93■□□□□ 0.94
RAB40C-206ENST00000561781 CYB5D1Q6P9G0 228 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 PI4KAP1Q8N8J0 262 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 PARD3BQ8TEW8 1205 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 MROH7-TTC4A0A0A0MT08 1334 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 NEFHP12036 1026 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 FILIP1LQ4L180 1135 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 OLFM4Q6UX06 510 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 EDC3Q96F86 508 aaKnown RBP20.93■□□□□ 0.94
RAB40C-206ENST00000561781 THOC1Q96FV9 657 aaKnown RBP20.93■□□□□ 0.94
RAB40C-206ENST00000561781 SELENOOQ9BVL4 669 aa20.93■□□□□ 0.94
RAB40C-206ENST00000561781 KCPQ6ZWJ8 1503 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 SASH1O94885 1247 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 CMA1P23946 247 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 PNOCQ13519 176 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 OTUD7BQ6GQQ9 843 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 STOX1Q6ZVD7 989 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 TTF2Q9UNY4 1162 aaKnown RBP20.92■□□□□ 0.94
RAB40C-206ENST00000561781 LOC102724428A0A0B4J2F2 783 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 PDHBP11177 359 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 SIK1P57059 783 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 TTLL7Q6ZT98 887 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 LMBR1Q8WVP7 490 aa20.92■□□□□ 0.94
RAB40C-206ENST00000561781 TMX4Q9H1E5 349 aaPredicted RBP20.92■□□□□ 0.94
RAB40C-206ENST00000561781 ITPK1Q13572 414 aa20.91■□□□□ 0.94
RAB40C-206ENST00000561781 CCDC129Q6ZRS4 1044 aa20.91■□□□□ 0.94
RAB40C-206ENST00000561781 RASGRP2Q7LDG7 609 aa20.91■□□□□ 0.94
RAB40C-206ENST00000561781 RPS6KL1Q9Y6S9 549 aa20.91■□□□□ 0.94
RAB40C-206ENST00000561781 AKR1B15C9JRZ8 316 aaPredicted RBP20.9■□□□□ 0.94
RAB40C-206ENST00000561781 EPB41P11171 864 aaKnown RBP20.9■□□□□ 0.94
RAB40C-206ENST00000561781 RBM5P52756 815 aaKnown RBP eCLIP20.9■□□□□ 0.94
RAB40C-206ENST00000561781 EIF4A1P60842 406 aaKnown RBP20.9■□□□□ 0.94
RAB40C-206ENST00000561781 FAM228AQ86W67 206 aa20.9■□□□□ 0.94
RAB40C-206ENST00000561781 FUKQ8N0W3 1084 aa20.9■□□□□ 0.94
RAB40C-206ENST00000561781 CCDC114Q96M63 670 aa20.9■□□□□ 0.94
RAB40C-206ENST00000561781 SCLT1Q96NL6 688 aa20.9■□□□□ 0.94
RAB40C-206ENST00000561781 PAPPAQ13219 1627 aa20.9■□□□□ 0.94
RAB40C-206ENST00000561781 EIF2S2P20042 333 aaKnown RBP20.9■□□□□ 0.94
RAB40C-206ENST00000561781 PEX19P40855 299 aa20.9■□□□□ 0.94
RAB40C-206ENST00000561781 ZBTB10Q96DT7 871 aa20.9■□□□□ 0.94
RAB40C-206ENST00000561781 RPGRIP1Q96KN7 1286 aa20.9■□□□□ 0.94
RAB40C-206ENST00000561781 U3KPZ7 1027 aaPredicted RBP20.9■□□□□ 0.94
RAB40C-206ENST00000561781 KDM3BQ7LBC6 1761 aa20.9■□□□□ 0.94
RAB40C-206ENST00000561781 FDPSP14324 419 aaKnown RBP20.89■□□□□ 0.94
RAB40C-206ENST00000561781 SYKP43405 635 aa20.89■□□□□ 0.94
RAB40C-206ENST00000561781 NAA35Q5VZE5 725 aa20.89■□□□□ 0.94
RAB40C-206ENST00000561781 RAD9BQ6WBX8 426 aa20.89■□□□□ 0.94
RAB40C-206ENST00000561781 DHX32Q7L7V1 743 aaKnown RBP20.89■□□□□ 0.94
RAB40C-206ENST00000561781 KIRREL3Q8IZU9 778 aa20.89■□□□□ 0.94
RAB40C-206ENST00000561781 DRAXINQ8NBI3 349 aaPredicted RBP20.89■□□□□ 0.94
RAB40C-206ENST00000561781 OR8K1Q8NGG5 319 aa20.89■□□□□ 0.94
RAB40C-206ENST00000561781 EPN3Q9H201 632 aa20.89■□□□□ 0.94
RAB40C-206ENST00000561781 CCNL1Q9UK58 526 aaPredicted RBP20.89■□□□□ 0.94
RAB40C-206ENST00000561781 AMPD2Q01433 879 aa20.89■□□□□ 0.93
RAB40C-206ENST00000561781 DNAJC10Q8IXB1 793 aa20.89■□□□□ 0.93
RAB40C-206ENST00000561781 KLHL23Q8NBE8 558 aa20.89■□□□□ 0.93
RAB40C-206ENST00000561781 TPX2Q9ULW0 747 aaKnown RBP20.89■□□□□ 0.93
RAB40C-206ENST00000561781 CHGBP05060 677 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 ATP5JP18859 108 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 PDE4BQ07343 736 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 TXNRD1Q16881 649 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 MYSM1Q5VVJ2 828 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 COQ9O75208 318 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 RPSAP08865 295 aaKnown RBP20.88■□□□□ 0.93
RAB40C-206ENST00000561781 CDC27P30260 824 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 RAB27AP51159 221 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 KCNB1Q14721 858 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 E2F5Q15329 346 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 NCAPH2Q6IBW4 605 aa20.88■□□□□ 0.93
RAB40C-206ENST00000561781 SPDYE1Q8NFV5 336 aaPredicted RBP20.88■□□□□ 0.93
RAB40C-206ENST00000561781 LAMA4Q16363 1823 aa20.87■□□□□ 0.93
RAB40C-206ENST00000561781 MARCKSP29966 332 aaPredicted RBP20.87■□□□□ 0.93
RAB40C-206ENST00000561781 PDCLQ13371 301 aa20.87■□□□□ 0.93
RAB40C-206ENST00000561781 CCNI2Q6ZMN8 369 aaPredicted RBP20.87■□□□□ 0.93
RAB40C-206ENST00000561781 FBXO3Q9UK99 471 aa20.87■□□□□ 0.93
RAB40C-206ENST00000561781 HMGB1P09429 215 aaKnown RBP20.87■□□□□ 0.93
RAB40C-206ENST00000561781 PDIA3P30101 505 aaKnown RBP20.87■□□□□ 0.93
RAB40C-206ENST00000561781 NBPF14Q5TI25 921 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms