RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 URI1O94763 535 aaPredicted RBP12.46□□□□□ -0.42
NEIL1-202ENST00000561643 FUT2Q10981 343 aa12.46□□□□□ -0.42
NEIL1-202ENST00000561643 ZNF174Q15697 407 aa12.46□□□□□ -0.42
NEIL1-202ENST00000561643 ARHGAP29Q52LW3 1261 aa12.46□□□□□ -0.42
NEIL1-202ENST00000561643 REXO1L1PQ8IX06 675 aa12.46□□□□□ -0.42
NEIL1-202ENST00000561643 SYMPKQ92797 1274 aaKnown RBP12.46□□□□□ -0.42
NEIL1-202ENST00000561643 FAM84BQ96KN1 310 aaPredicted RBP12.46□□□□□ -0.42
NEIL1-202ENST00000561643 MINPP1Q9UNW1 487 aa12.46□□□□□ -0.42
NEIL1-202ENST00000561643 A0A087X0B3 334 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 BMP15O95972 392 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 ERCC5P28715 1186 aaPredicted RBP12.45□□□□□ -0.42
NEIL1-202ENST00000561643 TROAPQ12815 778 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 TBX2Q13207 712 aaPredicted RBP12.45□□□□□ -0.42
NEIL1-202ENST00000561643 CTR9Q6PD62 1173 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 TRIM65Q6PJ69 517 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 TMEM139Q8IV31 216 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 MNS1Q8NEH6 495 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 CTCFLQ8NI51 663 aaPredicted RBP12.45□□□□□ -0.42
NEIL1-202ENST00000561643 PHLPP1O60346 1717 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 MYO1CO00159 1063 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 CASP1P29466 404 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 FERMT2Q96AC1 680 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 THRAP3Q9Y2W1 955 aaKnown RBP12.45□□□□□ -0.42
NEIL1-202ENST00000561643 COL4A1P02462 1669 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 PCP11498 1178 aaKnown RBP12.45□□□□□ -0.42
NEIL1-202ENST00000561643 NOP2P46087 812 aaKnown RBP12.45□□□□□ -0.42
NEIL1-202ENST00000561643 STX17P56962 302 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
NEIL1-202ENST00000561643 TTC38Q5R3I4 469 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 CLEC4GQ6UXB4 293 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 TMTC3Q6ZXV5 915 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 TC2NQ8N9U0 490 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 SPATA20Q8TB22 786 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 CELF1Q92879 486 aaKnown RBP12.45□□□□□ -0.42
NEIL1-202ENST00000561643 SMARCC1Q92922 1105 aaPredicted RBP12.45□□□□□ -0.42
NEIL1-202ENST00000561643 PAGE5Q96GU1 130 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 MED15Q96RN5 788 aa12.45□□□□□ -0.42
NEIL1-202ENST00000561643 CICQ96RK0 1608 aaPredicted RBP12.44□□□□□ -0.42
NEIL1-202ENST00000561643 MYH14Q7Z406 1995 aaKnown RBP12.44□□□□□ -0.42
NEIL1-202ENST00000561643 VWA3AA6NCI4 1184 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 STX10O60499 249 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 DDAH1O94760 285 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 SEC31AO94979 1220 aaKnown RBP12.44□□□□□ -0.42
NEIL1-202ENST00000561643 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
NEIL1-202ENST00000561643 TXLNBQ8N3L3 684 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 WNT7AO00755 349 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 KCNQ2O43526 872 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
NEIL1-202ENST00000561643 ZNF384Q8TF68 577 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 UBXN4Q92575 508 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
NEIL1-202ENST00000561643 SYNRGQ9UMZ2 1314 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 DUOX1Q9NRD9 1551 aa12.44□□□□□ -0.42
NEIL1-202ENST00000561643 GOLGA6L9A6NEM1 432 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 NMT2O60551 498 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 GNG11P61952 73 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 FAM47AQ5JRC9 791 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 CRNKL1Q9BZJ0 848 aaKnown RBP12.43□□□□□ -0.42
NEIL1-202ENST00000561643 MYH2Q9UKX2 1941 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 MYH6P13533 1939 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 KLRK1P26718 216 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 NLRP5P59047 1200 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 MECOMQ03112 1051 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 EVX2Q03828 476 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 PTGDRQ13258 359 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 NR1I3Q14994 352 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 TOGARAM2Q6ZUX3 1019 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 SMYD4Q8IYR2 804 aaPredicted RBP12.43□□□□□ -0.42
NEIL1-202ENST00000561643 NSUN4Q96CB9 384 aaKnown RBP12.43□□□□□ -0.42
NEIL1-202ENST00000561643 TFCP2L1Q9NZI6 479 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 CLGNO14967 610 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 KCNQ4P56696 695 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 SPATA1Q5VX52 437 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 TMCO3Q6UWJ1 677 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 STAMQ92783 540 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 SRRTQ9BXP5 876 aaKnown RBP12.43□□□□□ -0.42
NEIL1-202ENST00000561643 CNTNAP5Q8WYK1 1306 aa12.43□□□□□ -0.42
NEIL1-202ENST00000561643 BAZ2AQ9UIF9 1905 aaKnown RBP12.42□□□□□ -0.42
NEIL1-202ENST00000561643 A0A1B0GTH6 734 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 FGRP09769 529 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
NEIL1-202ENST00000561643 CASQ1P31415 396 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 PIK3AP1Q6ZUJ8 805 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 SRBD1Q8N5C6 995 aaKnown RBP12.42□□□□□ -0.42
NEIL1-202ENST00000561643 BANK1Q8NDB2 785 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 DESI2Q9BSY9 194 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 DCP1AQ9NPI6 582 aaPredicted RBP12.42□□□□□ -0.42
NEIL1-202ENST00000561643 AKR1B15C9JRZ8 316 aaPredicted RBP12.42□□□□□ -0.42
NEIL1-202ENST00000561643 FANCGO15287 622 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 TEX33O43247 280 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 SLC4A8Q2Y0W8 1093 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 MUM1L1Q5H9M0 696 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 SH3RF1Q7Z6J0 888 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 FBXO33Q7Z6M2 555 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 PPFIBP1Q86W92 1011 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 GSDMAQ96QA5 445 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 CARD6Q9BX69 1037 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms