RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 AMIGO3Q86WK7 504 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 VSTM4Q8IW00 320 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 TOMM22Q9NS69 142 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 FMNL1O95466 1100 aaPredicted RBP15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 IFNAR1P17181 557 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 USP8P40818 1118 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 SSRP1Q08945 709 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 TPTE2Q6XPS3 522 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 TADA2BQ86TJ2 420 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 ZNF384Q8TF68 577 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 ZKSCAN3Q9BRR0 538 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 SLC26A6Q9BXS9 759 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 ANKRD2Q9GZV1 360 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 CEP83Q9Y592 693 aa15.84■□□□□ 0.13
RABGGTA-220ENST00000560998 PDS5AQ29RF7 1337 aaKnown RBP15.83■□□□□ 0.13
RABGGTA-220ENST00000560998 A0A1B0GVL5 298 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 MINDY4BA8MYZ0 360 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 STX10O60499 249 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 NDUFA8P51970 172 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 CHMP4BP1P59074 171 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 DYNLL1P63167 89 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 RTN1Q16799 776 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 FAM182BQ5T319 152 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 STK11IPQ8N1F8 1099 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 TMTC2Q8N394 836 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 EPC1Q9H2F5 836 aa15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 BAZ2AQ9UIF9 1905 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-220ENST00000560998 ERICH2A1L162 156 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 SLC3A2P08195 630 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 TOP1P11387 765 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 TRIM29Q14134 588 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 SLC39A14Q15043 492 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 TMEM139Q8IV31 216 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 CCDC24Q8N4L8 307 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 BRIP1Q9BX63 1249 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 L1RE1Q9UN81 338 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 SPATA31A6Q5VVP1 1343 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 SBF2Q86WG5 1849 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 TNRC6CQ9HCJ0 1690 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 UBE2Q2LH0YL09 131 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 TM4SF1P30408 202 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 RCAN1P53805 252 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 UBASH3AP57075 661 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 DNAJC21Q5F1R6 531 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 LRRC31Q6UY01 552 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 WASF1Q92558 559 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 WDR24Q96S15 920 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 TACO1Q9BSH4 297 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 DONSONQ9NYP3 566 aa15.82■□□□□ 0.12
RABGGTA-220ENST00000560998 DUOX1Q9NRD9 1551 aa15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 CCDC196A0A1B0GTZ2 297 aa15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 CMA1P23946 247 aa15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 SEC23AQ15436 765 aa15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 ESR2Q92731 530 aa15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 ERCC4Q92889 916 aaPredicted RBP15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 UBAC1Q9BSL1 405 aa15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 FAN1Q9Y2M0 1017 aa15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 MYH2Q9UKX2 1941 aa15.81■□□□□ 0.12
RABGGTA-220ENST00000560998 A0A087WWV3 80 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 SMIM22K7EJ46 135 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 CUTAO60888 179 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 MAST2Q6P0Q8 1798 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 ZNF654Q8IZM8 581 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 DHX58Q96C10 678 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 NSUN4Q96CB9 384 aaKnown RBP15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 BAG1Q99933 345 aaPredicted RBP15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 CXorf56Q9H5V9 222 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 TFCP2L1Q9NZI6 479 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 WDHD1O75717 1129 aaPredicted RBP15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 SERPINC1P01008 464 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 GUCY1A2P33402 732 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 MYL5Q02045 173 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 MECOMQ03112 1051 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 MCM6Q14566 821 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 PTPAQ15257 358 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 MAP3K14Q99558 947 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 ANKZF1Q9H8Y5 726 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 VIPAS39Q9H9C1 493 aa15.8■□□□□ 0.12
RABGGTA-220ENST00000560998 TNKSO95271 1327 aa15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 IRS2Q9Y4H2 1338 aa15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 CYP2D7A0A087X1C5 515 aa15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 PPP6R2O75170 966 aa15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 TRIM22Q8IYM9 498 aa15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 CRACR2BQ8N4Y2 399 aaPredicted RBP15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 FANCBQ8NB91 859 aa15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 CNNM3Q8NE01 707 aa15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 CTCFLQ8NI51 663 aaPredicted RBP15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 TAOK2Q9UL54 1235 aa15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 DLEC1Q9Y238 1755 aa15.79■□□□□ 0.12
RABGGTA-220ENST00000560998 MROH7-TTC4A0A0A0MT08 1334 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 FGRP09769 529 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 PFKFB1P16118 471 aa15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 BRD2P25440 801 aaKnown RBP15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 LMOD1P29536 600 aaPredicted RBP15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 MARCKSP29966 332 aaPredicted RBP15.78■□□□□ 0.12
RABGGTA-220ENST00000560998 TBX2Q13207 712 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms