RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 LPIN3Q9BQK8 851 aa7.17□□□□□ -1.26
HMG20A-212ENST00000560986 API5Q9BZZ5 524 aaKnown RBP7.17□□□□□ -1.26
HMG20A-212ENST00000560986 ABCB6Q9NP58 842 aa7.17□□□□□ -1.26
HMG20A-212ENST00000560986 USP21Q9UK80 565 aa7.17□□□□□ -1.26
HMG20A-212ENST00000560986 PTPRCP08575 1304 aa7.17□□□□□ -1.26
HMG20A-212ENST00000560986 KDM2BQ8NHM5 1336 aa7.17□□□□□ -1.26
HMG20A-212ENST00000560986 IBTKQ9P2D0 1353 aaPredicted RBP7.17□□□□□ -1.26
HMG20A-212ENST00000560986 TMEM238LA0A1B0GVL6 79 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 VAMP4O75379 141 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 EIF2AK2P19525 551 aaKnown RBP7.16□□□□□ -1.26
HMG20A-212ENST00000560986 FCGRTP55899 365 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 ATP11AP98196 1134 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 EXOSC9Q06265 439 aaKnown RBP7.16□□□□□ -1.26
HMG20A-212ENST00000560986 MVPQ14764 893 aaKnown RBP7.16□□□□□ -1.26
HMG20A-212ENST00000560986 TAF1CQ15572 869 aaPredicted RBP7.16□□□□□ -1.26
HMG20A-212ENST00000560986 PLEKHO1Q53GL0 409 aaPredicted RBP7.16□□□□□ -1.26
HMG20A-212ENST00000560986 AKAP4Q5JQC9 854 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 MEI1Q5TIA1 1274 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 C9orf131Q5VYM1 1079 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 FBXO11Q86XK2 927 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 FTSJ3Q8IY81 847 aaKnown RBP7.16□□□□□ -1.26
HMG20A-212ENST00000560986 DZIP1LQ8IYY4 767 aaKnown RBP7.16□□□□□ -1.26
HMG20A-212ENST00000560986 TMEM102Q8N9M5 508 aaPredicted RBP7.16□□□□□ -1.26
HMG20A-212ENST00000560986 RNF34Q969K3 372 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 CRBNQ96SW2 442 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 PBX4Q9BYU1 374 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 RBSNQ9H1K0 784 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 RASSF4Q9H2L5 321 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 SMC4Q9NTJ3 1288 aa7.16□□□□□ -1.26
HMG20A-212ENST00000560986 BCAR3O75815 825 aa7.15□□□□□ -1.26
HMG20A-212ENST00000560986 HSP90AB1P08238 724 aaKnown RBP7.15□□□□□ -1.26
HMG20A-212ENST00000560986 ZNF76P36508 570 aa7.15□□□□□ -1.26
HMG20A-212ENST00000560986 ST13P50502 369 aaKnown RBP7.15□□□□□ -1.26
HMG20A-212ENST00000560986 TWISTNBQ3B726 338 aaPredicted RBP7.15□□□□□ -1.26
HMG20A-212ENST00000560986 BRINP3Q76B58 766 aa7.15□□□□□ -1.26
HMG20A-212ENST00000560986 METTL16Q86W50 562 aaKnown RBP7.15□□□□□ -1.26
HMG20A-212ENST00000560986 C3orf58Q8NDZ4 430 aa7.15□□□□□ -1.26
HMG20A-212ENST00000560986 NXPE3Q969Y0 559 aa7.15□□□□□ -1.26
HMG20A-212ENST00000560986 HHIPQ96QV1 700 aa7.15□□□□□ -1.26
HMG20A-212ENST00000560986 BHLHE41Q9C0J9 482 aaPredicted RBP7.15□□□□□ -1.26
HMG20A-212ENST00000560986 FRRS1LQ9P0K9 344 aa7.15□□□□□ -1.26
HMG20A-212ENST00000560986 NHSL1Q5SYE7 1610 aa7.15□□□□□ -1.27
HMG20A-212ENST00000560986 ADAMTS7Q9UKP4 1686 aa7.15□□□□□ -1.27
HMG20A-212ENST00000560986 CRYBG1Q9Y4K1 1723 aa7.15□□□□□ -1.27
HMG20A-212ENST00000560986 XIRP1Q702N8 1843 aaKnown RBP7.15□□□□□ -1.27
HMG20A-212ENST00000560986 PDE2AO00408 941 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 EIF5BO60841 1220 aaKnown RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 XRCC5P13010 732 aaKnown RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 FBLN1P23142 703 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 ERCC5P28715 1186 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 GRIA4P48058 902 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 HSPA2P54652 639 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 IRX6P78412 446 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 HDAC1Q13547 482 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 TAF7Q15545 349 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 MTHFSDQ2M296 383 aaKnown RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 AHDC1Q5TGY3 1603 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 DTHD1Q6ZMT9 781 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 NT5DC4Q86YG4 428 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 DTWD1Q8N5C7 304 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 DLG5Q8TDM6 1919 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 WFDC12Q8WWY7 111 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 SSH1Q8WYL5 1049 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 TSR2Q969E8 191 aaKnown RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 PLD4Q96BZ4 506 aa7.14□□□□□ -1.27
HMG20A-212ENST00000560986 RWDD1Q9H446 243 aaPredicted RBP7.14□□□□□ -1.27
HMG20A-212ENST00000560986 PXDNLA1KZ92 1463 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 ABCC4O15439 1325 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 METTL12A8MUP2 240 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 HYAL3O43820 417 aaPredicted RBP7.13□□□□□ -1.27
HMG20A-212ENST00000560986 DEAF1O75398 565 aaPredicted RBP7.13□□□□□ -1.27
HMG20A-212ENST00000560986 SMNDC1O75940 238 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMG20A-212ENST00000560986 TRIM27P14373 513 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 NOS3P29474 1203 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 IREB2P48200 963 aaKnown RBP7.13□□□□□ -1.27
HMG20A-212ENST00000560986 LRP8Q14114 963 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 CEP135Q66GS9 1140 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 ELMSAN1Q6PJG2 1045 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 ANKRD24Q8TF21 1146 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 TTC9Q92623 222 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 POP1Q99575 1024 aaKnown RBP7.13□□□□□ -1.27
HMG20A-212ENST00000560986 TTF2Q9UNY4 1162 aaKnown RBP7.13□□□□□ -1.27
HMG20A-212ENST00000560986 AKAP2Q9Y2D5 859 aa7.13□□□□□ -1.27
HMG20A-212ENST00000560986 A0A096LPE4 126 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 A0A1W2PPZ6 126 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 PLIN1O60240 522 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 ITPKAP23677 461 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 PTPN12Q05209 780 aaKnown RBP7.12□□□□□ -1.27
HMG20A-212ENST00000560986 SPRED3Q2MJR0 410 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 C1orf141Q5JVX7 400 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 CCDC30Q5VVM6 783 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 NBPF6Q5VWK0 638 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 ASAP3Q8TDY4 903 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 NBPF4Q96M43 638 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 SMG9Q9H0W8 520 aaKnown RBP7.12□□□□□ -1.27
HMG20A-212ENST00000560986 ZFYVE1Q9HBF4 777 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 PPM1HQ9ULR3 514 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 COL18A1P39060 1754 aa7.12□□□□□ -1.27
HMG20A-212ENST00000560986 COL22A1Q8NFW1 1626 aaPredicted RBP7.12□□□□□ -1.27
HMG20A-212ENST00000560986 MRC1P22897 1456 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms