RNA–Protein interactions for RNA: ENST00000560915.1

KATNBL1-215, Transcript of katanin regulatory subunit B1 like 1, human

Gene KATNBL1, Length 1,553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KATNBL1-215	ENST00000560915	HPS5	Q9UPZ3	1129 aa		33.09	■■■□□ 2.89
KATNBL1-215	ENST00000560915	RXRA	P19793	462 aa		33.08	■■■□□ 2.89
KATNBL1-215	ENST00000560915	ECE1	P42892	770 aa		33.08	■■■□□ 2.89
KATNBL1-215	ENST00000560915	TROAP	Q12815	778 aa		33.08	■■■□□ 2.89
KATNBL1-215	ENST00000560915	SH2B1	Q9NRF2	756 aa	Predicted RBP	33.08	■■■□□ 2.89
KATNBL1-215	ENST00000560915	PTPRF	P10586	1907 aa		33.07	■■■□□ 2.88
KATNBL1-215	ENST00000560915	DDAH1	O94760	285 aa		33.06	■■■□□ 2.88
KATNBL1-215	ENST00000560915	ELP3	Q9H9T3	547 aa		33.06	■■■□□ 2.88
KATNBL1-215	ENST00000560915	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	33.06	■■■□□ 2.88
KATNBL1-215	ENST00000560915	TMX2	Q9Y320	296 aa		33.06	■■■□□ 2.88
KATNBL1-215	ENST00000560915	PFKFB2	O60825	505 aa		33.05	■■■□□ 2.88
KATNBL1-215	ENST00000560915	RCAN1	P53805	252 aa		33.05	■■■□□ 2.88
KATNBL1-215	ENST00000560915	NECAB1	Q8N987	351 aa		33.05	■■■□□ 2.88
KATNBL1-215	ENST00000560915	NUP133	Q8WUM0	1156 aa		33.05	■■■□□ 2.88
KATNBL1-215	ENST00000560915	SLK	Q9H2G2	1235 aa	Predicted RBP	33.05	■■■□□ 2.88
KATNBL1-215	ENST00000560915	SYNPO2	Q9UMS6	1093 aa		33.05	■■■□□ 2.88
KATNBL1-215	ENST00000560915	ZHX2	Q9Y6X8	837 aa		33.05	■■■□□ 2.88
KATNBL1-215	ENST00000560915	UNCX	A6NJT0	531 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	METAP2	P50579	478 aa	Known RBP eCLIP	33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	CCDC144CP	Q8IYA2	1237 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	WDR18	Q9BV38	432 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	AS3MT	Q9HBK9	375 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	MTMR7	Q9Y216	660 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	NID2	Q14112	1375 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	CALM1	P0DP23	149 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	CALM2	P0DP24	149 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	CALM3	P0DP25	149 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	CCT2	P78371	535 aa	Known RBP	33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	GTF3C6	Q969F1	213 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	SH2D4A	Q9H788	454 aa		33.04	■■■□□ 2.88
KATNBL1-215	ENST00000560915	GOLGA8A	A7E2F4	631 aa		33.03	■■■□□ 2.88
KATNBL1-215	ENST00000560915	SCRN1	Q12765	414 aa		33.03	■■■□□ 2.88
KATNBL1-215	ENST00000560915	ST3GAL1	Q11201	340 aa		33.02	■■■□□ 2.88
KATNBL1-215	ENST00000560915	RASGRP2	Q7LDG7	609 aa		33.02	■■■□□ 2.88
KATNBL1-215	ENST00000560915	ZNF280C	Q8ND82	737 aa		33.02	■■■□□ 2.88
KATNBL1-215	ENST00000560915	GMCL1P1	Q8NEA9	526 aa		33.02	■■■□□ 2.88
KATNBL1-215	ENST00000560915	CNKSR2	Q8WXI2	1034 aa		33.02	■■■□□ 2.88
KATNBL1-215	ENST00000560915	FEZ1	Q99689	392 aa		33.02	■■■□□ 2.88
KATNBL1-215	ENST00000560915	NCOA5	Q9HCD5	579 aa	Known RBP	33.02	■■■□□ 2.88
KATNBL1-215	ENST00000560915	FANCB	Q8NB91	859 aa		33.01	■■■□□ 2.88
KATNBL1-215	ENST00000560915	CHMP4C	Q96CF2	233 aa		33.01	■■■□□ 2.88
KATNBL1-215	ENST00000560915		F5H6K3	240 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	KLRC3	Q07444	240 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	FSTL1	Q12841	308 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	SPP2	Q13103	211 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	ERO1B	Q86YB8	467 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	CCDC83	Q8IWF9	413 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	MAP3K14	Q99558	947 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	AFG3L2	Q9Y4W6	797 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	SPDYE5	A6NIY4	337 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	RAD21	O60216	631 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	PDHB	P11177	359 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	PPAT	Q06203	517 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	ZYX	Q15942	572 aa	Known RBP	33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	RTN1	Q16799	776 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	KIAA1683	Q9H0B3	1180 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	GOPC	Q9HD26	462 aa		33	■■■□□ 2.87
KATNBL1-215	ENST00000560915	TRIM75P	A6NK02	468 aa		32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	USP17L10	C9JJH3	530 aa		32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	SNHG28	P0DPA3	235 aa		32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	CDC27	P30260	824 aa		32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	MTMR2	Q13614	643 aa		32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	CUL4A	Q13619	759 aa		32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	GRM4	Q14833	912 aa		32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	SLFN13	Q68D06	897 aa		32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	CTCFL	Q8NI51	663 aa	Predicted RBP	32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	VCPKMT	Q9H867	229 aa		32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	FAM217B	Q9NTX9	383 aa	Predicted RBP	32.99	■■■□□ 2.87
KATNBL1-215	ENST00000560915	NDUFB10	O96000	172 aa		32.98	■■■□□ 2.87
KATNBL1-215	ENST00000560915	ADD1	P35611	737 aa	Known RBP	32.98	■■■□□ 2.87
KATNBL1-215	ENST00000560915	SLC10A4	Q96EP9	437 aa		32.98	■■■□□ 2.87
KATNBL1-215	ENST00000560915	OTUD5	Q96G74	571 aa		32.98	■■■□□ 2.87
KATNBL1-215	ENST00000560915	BACE1	P56817	501 aa		32.97	■■■□□ 2.87
KATNBL1-215	ENST00000560915	KIAA1755	Q5JYT7	1200 aa		32.97	■■■□□ 2.87
KATNBL1-215	ENST00000560915	USP17L2	Q6R6M4	530 aa		32.97	■■■□□ 2.87
KATNBL1-215	ENST00000560915	OPTN	Q96CV9	577 aa		32.97	■■■□□ 2.87
KATNBL1-215	ENST00000560915	MAD2L2	Q9UI95	211 aa		32.97	■■■□□ 2.87
KATNBL1-215	ENST00000560915	SLC4A3	P48751	1232 aa		32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	HUNK	P57058	714 aa		32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	PPP2R5B	Q15173	497 aa		32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	SPICE1	Q8N0Z3	855 aa		32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	DCAF4	Q8WV16	495 aa		32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	MYH6	P13533	1939 aa		32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	PARP1	P09874	1014 aa	Known RBP	32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	KIF5B	P33176	963 aa		32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	GMCL1	Q96IK5	515 aa		32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	RBM28	Q9NW13	759 aa	Known RBP	32.96	■■■□□ 2.87
KATNBL1-215	ENST00000560915	USP14	P54578	494 aa		32.95	■■■□□ 2.86
KATNBL1-215	ENST00000560915	PPIL2	Q13356	520 aa		32.95	■■■□□ 2.86
KATNBL1-215	ENST00000560915	STAG2	Q8N3U4	1231 aa		32.95	■■■□□ 2.86
KATNBL1-215	ENST00000560915	LOC285556	D6RIA3	1793 aa		32.95	■■■□□ 2.86
KATNBL1-215	ENST00000560915	CCDC196	A0A1B0GTZ2	297 aa		32.94	■■■□□ 2.86
KATNBL1-215	ENST00000560915	PALM3	A6NDB9	673 aa	Predicted RBP	32.94	■■■□□ 2.86
KATNBL1-215	ENST00000560915	IRF6	O14896	467 aa		32.94	■■■□□ 2.86
KATNBL1-215	ENST00000560915	DHX16	O60231	1041 aa	Known RBP	32.94	■■■□□ 2.86
KATNBL1-215	ENST00000560915	GOLGA8H	P0CJ92	632 aa		32.94	■■■□□ 2.86
KATNBL1-215	ENST00000560915	SLC1A4	P43007	532 aa		32.94	■■■□□ 2.86
KATNBL1-215	ENST00000560915	DGKZ	Q13574	1117 aa		32.94	■■■□□ 2.86
KATNBL1-215	ENST00000560915	SAPCD2	Q86UD0	394 aa		32.94	■■■□□ 2.86
KATNBL1-215	ENST00000560915	BAZ2B	Q9UIF8	2168 aa	Known RBP	32.94	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms