RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LVRNQ6Q4G3 990 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 C10orf67Q8IYJ2 551 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 CCDC112Q8NEF3 446 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 MPP4Q96JB8 637 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 NELL2Q99435 816 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 TRAK1Q9UPV9 953 aa7.77□□□□□ -1.17
TSPAN3-209ENST00000560715 SPATA31D1Q6ZQQ2 1576 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 GABRDO14764 452 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 MORN1Q5T089 497 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 PDXDC2PQ6P474 469 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 PACS2Q86VP3 889 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 GOLGA6L1Q8N7Z2 621 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 KIFC2Q96AC6 838 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 OSGEPQ9NPF4 335 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 POLG2Q9UHN1 485 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 USP32Q8NFA0 1604 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 A6NJY4 79 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 PLCG2P16885 1265 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 SARSP49591 514 aaKnown RBP7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 ENAHQ8N8S7 591 aaPredicted RBP7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 USB1Q9BQ65 265 aaKnown RBP7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 CCDC113Q9H0I3 377 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 TOMM22Q9NS69 142 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 FAM8A1Q9UBU6 413 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 DMTF1Q9Y222 760 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 LUC7L2Q9Y383 392 aaKnown RBP7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 ZDHHC9Q9Y397 364 aa7.76□□□□□ -1.17
TSPAN3-209ENST00000560715 TNKSO95271 1327 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 FAM86C2PA6NEL3 165 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 CPNE3O75131 537 aaKnown RBP7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 AGERQ15109 404 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 FOXB2Q5VYV0 432 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 MNS1Q8NEH6 495 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 WDR66Q8TBY9 1149 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 NINJ1Q92982 152 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 CLUHP3Q96NS8 147 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 SELENOOQ9BVL4 669 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 PLCB1Q9NQ66 1216 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 KIAA1468Q9P260 1216 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 PLAAQ9Y263 795 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 A0A1B0GUL7 405 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 ID4P47928 161 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 RARSP54136 660 aaKnown RBP7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 EPHA4P54764 986 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 ALFQ53S48 1182 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 SPECC1Q5M775 1068 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 TEX35Q5T0J7 233 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 YOD1Q5VVQ6 348 aaPredicted RBP7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 TMEM132EQ6IEE7 984 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 PDXDC1Q6P996 788 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 C16orf54Q6UWD8 224 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 MED4Q9NPJ6 270 aa7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 CDV3Q9UKY7 258 aaKnown RBP7.75□□□□□ -1.17
TSPAN3-209ENST00000560715 PMM2O15305 246 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 INMTO95050 263 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 GSCP56915 257 aaPredicted RBP7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 RABEP1Q15276 862 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 PLA2G4EQ3MJ16 856 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 FBXO38Q6PIJ6 1188 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 SAMD7Q7Z3H4 446 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 C2orf49Q9BVC5 232 aaPredicted RBP7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 CXorf56Q9H5V9 222 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 ANLNQ9NQW6 1124 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 CWC15Q9P013 229 aaKnown RBP7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 RAI14Q9P0K7 980 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 ZMYM5Q9UJ78 669 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 GSG1L2A8MUP6 293 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 COL6A1P12109 1028 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 CALRP27797 417 aaKnown RBP7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 MVPQ14764 893 aaKnown RBP7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 ARSIQ5FYB1 569 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 WWC2Q6AWC2 1192 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 CCDC91Q7Z6B0 441 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 PJA1Q8NG27 643 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 RSPH1Q8WYR4 309 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 LCMT1Q9UIC8 334 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 GTF2A1LQ9UNN4 478 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 SLC4A7Q9Y6M7 1214 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 EVC2Q86UK5 1308 aa7.74□□□□□ -1.17
TSPAN3-209ENST00000560715 SCP2P22307 547 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 GDF10P55107 478 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 NUCB1Q02818 461 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 LMNB2Q03252 620 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 BMP2KLQ5H9B9 411 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 SRLQ86TD4 932 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 SLC9A9Q8IVB4 645 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 TCEAL8Q8IYN2 117 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 PPHLN1Q8NEY8 458 aaKnown RBP7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 NEK11Q8NG66 645 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 AK9Q5TCS8 1911 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 TULP4Q9NRJ4 1543 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 TNNT1P13805 278 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 MAP3K10Q02779 954 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 GALEQ14376 348 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 PTPN21Q16825 1174 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 GFOD2Q3B7J2 385 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 ERFEQ4G0M1 354 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 ATP13A4Q4VNC1 1196 aa7.73□□□□□ -1.17
TSPAN3-209ENST00000560715 AKAP4Q5JQC9 854 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms