RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 POTEB2H3BUK9 544 aa20.08■□□□□ 0.8
TRPM1-211ENST00000560658 SNAP23O00161 211 aa20.08■□□□□ 0.8
TRPM1-211ENST00000560658 GTPBP6O43824 516 aaPredicted RBP20.08■□□□□ 0.8
TRPM1-211ENST00000560658 MYL1P05976 194 aa20.08■□□□□ 0.8
TRPM1-211ENST00000560658 TXLNAP40222 546 aa20.08■□□□□ 0.8
TRPM1-211ENST00000560658 CLCN6P51797 869 aa20.08■□□□□ 0.8
TRPM1-211ENST00000560658 RABGGTAQ92696 567 aa20.08■□□□□ 0.8
TRPM1-211ENST00000560658 SAMSN1Q9NSI8 373 aaKnown RBP20.08■□□□□ 0.8
TRPM1-211ENST00000560658 MRFAP1Q9Y605 127 aa20.08■□□□□ 0.8
TRPM1-211ENST00000560658 CNTNAP5Q8WYK1 1306 aa20.08■□□□□ 0.8
TRPM1-211ENST00000560658 A0A1B0GUL6 1792 aa20.08■□□□□ 0.8
TRPM1-211ENST00000560658 LRRC10BA6NIK2 292 aa20.07■□□□□ 0.8
TRPM1-211ENST00000560658 SCG2P13521 617 aa20.07■□□□□ 0.8
TRPM1-211ENST00000560658 LONP1P36776 959 aaKnown RBP20.07■□□□□ 0.8
TRPM1-211ENST00000560658 GNAQP50148 359 aa20.07■□□□□ 0.8
TRPM1-211ENST00000560658 TERF2Q15554 542 aa20.07■□□□□ 0.8
TRPM1-211ENST00000560658 GALNT17Q6IS24 598 aa20.07■□□□□ 0.8
TRPM1-211ENST00000560658 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
TRPM1-211ENST00000560658 APTXQ7Z2E3 356 aaKnown RBP20.07■□□□□ 0.8
TRPM1-211ENST00000560658 ADGRA1Q86SQ6 560 aa20.07■□□□□ 0.8
TRPM1-211ENST00000560658 NYXQ9GZU5 481 aa20.07■□□□□ 0.8
TRPM1-211ENST00000560658 LIMA1Q9UHB6 759 aaKnown RBP20.07■□□□□ 0.8
TRPM1-211ENST00000560658 RWDD2AQ9UIY3 292 aa20.07■□□□□ 0.8
TRPM1-211ENST00000560658 MYH6P13533 1939 aa20.06■□□□□ 0.8
TRPM1-211ENST00000560658 MAST2Q6P0Q8 1798 aa20.06■□□□□ 0.8
TRPM1-211ENST00000560658 PPP1R3GB7ZBB8 358 aa20.06■□□□□ 0.8
TRPM1-211ENST00000560658 ZRANB2O95218 330 aaKnown RBP eCLIP20.06■□□□□ 0.8
TRPM1-211ENST00000560658 ATP2B1P20020 1258 aa20.06■□□□□ 0.8
TRPM1-211ENST00000560658 PFKFB3Q16875 520 aaPredicted RBP20.06■□□□□ 0.8
TRPM1-211ENST00000560658 SPTY2D1Q68D10 685 aaPredicted RBP20.06■□□□□ 0.8
TRPM1-211ENST00000560658 TMTC1Q8IUR5 882 aa20.06■□□□□ 0.8
TRPM1-211ENST00000560658 IGSF22Q8N9C0 903 aa20.06■□□□□ 0.8
TRPM1-211ENST00000560658 CARD6Q9BX69 1037 aa20.06■□□□□ 0.8
TRPM1-211ENST00000560658 MYO1AQ9UBC5 1043 aa20.06■□□□□ 0.8
TRPM1-211ENST00000560658 TAOK2Q9UL54 1235 aa20.06■□□□□ 0.8
TRPM1-211ENST00000560658 TTF2Q9UNY4 1162 aaKnown RBP20.06■□□□□ 0.8
TRPM1-211ENST00000560658 TUBBP07437 444 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 PPP2R3AQ06190 1150 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 ITPK1Q13572 414 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 ZNF771Q7L3S4 317 aaPredicted RBP20.05■□□□□ 0.8
TRPM1-211ENST00000560658 TRMT44Q8IYL2 757 aaKnown RBP20.05■□□□□ 0.8
TRPM1-211ENST00000560658 CMTR1Q8N1G2 835 aaKnown RBP20.05■□□□□ 0.8
TRPM1-211ENST00000560658 ANKS1AQ92625 1134 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 GOLGA1Q92805 767 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 KIFC2Q96AC6 838 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 FAM84BQ96KN1 310 aaPredicted RBP20.05■□□□□ 0.8
TRPM1-211ENST00000560658 MED15Q96RN5 788 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 MINPP1Q9UNW1 487 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 COL1A1P02452 1464 aaPredicted RBP20.05■□□□□ 0.8
TRPM1-211ENST00000560658 KIF5CO60282 957 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 MFAP3LO75121 409 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 PLEKHA8P1O95397 391 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 GYG1P46976 350 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 ADKP55263 362 aaKnown RBP20.05■□□□□ 0.8
TRPM1-211ENST00000560658 E2F4Q16254 413 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 ZNF827Q17R98 1081 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 USP49Q70CQ1 688 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 GRAMD1CQ8IYS0 662 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 CEP112Q8N8E3 955 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 NSUN4Q96CB9 384 aaKnown RBP20.05■□□□□ 0.8
TRPM1-211ENST00000560658 EPSTI1Q96J88 318 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 ZNF446Q9NWS9 450 aa20.05■□□□□ 0.8
TRPM1-211ENST00000560658 NLRP5P59047 1200 aa20.04■□□□□ 0.8
TRPM1-211ENST00000560658 PTGDRQ13258 359 aa20.04■□□□□ 0.8
TRPM1-211ENST00000560658 NPY5RQ15761 445 aa20.04■□□□□ 0.8
TRPM1-211ENST00000560658 BARGINQ6ZT62 677 aa20.04■□□□□ 0.8
TRPM1-211ENST00000560658 RSRC2Q7L4I2 434 aaKnown RBP20.04■□□□□ 0.8
TRPM1-211ENST00000560658 RASGRP2Q7LDG7 609 aa20.04■□□□□ 0.8
TRPM1-211ENST00000560658 DGKHQ86XP1 1220 aa20.04■□□□□ 0.8
TRPM1-211ENST00000560658 CERS3Q8IU89 383 aa20.04■□□□□ 0.8
TRPM1-211ENST00000560658 FHOD1Q9Y613 1164 aa20.04■□□□□ 0.8
TRPM1-211ENST00000560658 USP17L12C9JPN9 530 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 USP17L21D6R901 530 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 LAD1O00515 517 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 PNMA6AP0CW24 399 aaPredicted RBP20.03■□□□□ 0.8
TRPM1-211ENST00000560658 AFMP43652 599 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 ZNF658Q5TYW1 1059 aaPredicted RBP20.03■□□□□ 0.8
TRPM1-211ENST00000560658 TOGARAM2Q6ZUX3 1019 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 SHISA4Q96DD7 197 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 MAGEF1Q9HAY2 307 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 ADGRG1Q9Y653 693 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 COL5A3P25940 1745 aaPredicted RBP20.03■□□□□ 0.8
TRPM1-211ENST00000560658 LAMB1P07942 1786 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 NRAPQ86VF7 1730 aa20.03■□□□□ 0.8
TRPM1-211ENST00000560658 A0A087X0B3 334 aa20.02■□□□□ 0.8
TRPM1-211ENST00000560658 CCDC66A2RUB6 948 aa20.02■□□□□ 0.8
TRPM1-211ENST00000560658 ADAMTS2O95450 1211 aa20.02■□□□□ 0.8
TRPM1-211ENST00000560658 DYNLL1P63167 89 aaKnown RBP20.02■□□□□ 0.8
TRPM1-211ENST00000560658 ZNF174Q15697 407 aa20.02■□□□□ 0.8
TRPM1-211ENST00000560658 TEX35Q5T0J7 233 aa20.02■□□□□ 0.8
TRPM1-211ENST00000560658 NOC3LQ8WTT2 800 aaKnown RBP20.02■□□□□ 0.8
TRPM1-211ENST00000560658 DCP1AQ9NPI6 582 aaPredicted RBP20.02■□□□□ 0.8
TRPM1-211ENST00000560658 H7C1D1 291 aa20.02■□□□□ 0.79
TRPM1-211ENST00000560658 PPP1R2P41236 205 aa20.02■□□□□ 0.79
TRPM1-211ENST00000560658 PAK1Q13153 545 aa20.02■□□□□ 0.79
TRPM1-211ENST00000560658 BRD3Q15059 726 aa20.02■□□□□ 0.79
TRPM1-211ENST00000560658 ERFEQ4G0M1 354 aa20.02■□□□□ 0.79
TRPM1-211ENST00000560658 PDXDC2PQ6P474 469 aa20.02■□□□□ 0.79
TRPM1-211ENST00000560658 SRBD1Q8N5C6 995 aaKnown RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms