RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 CCDC51Q96ER9 411 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 COA1Q9GZY4 146 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 YY1AP1Q9H869 796 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 BRMS1Q9HCU9 246 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 TRMT1Q9NXH9 659 aaKnown RBP9.74□□□□□ -0.85
CCDC33-209ENST00000560565 MYO1AQ9UBC5 1043 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 CDK5RAP2Q96SN8 1893 aa9.74□□□□□ -0.85
CCDC33-209ENST00000560565 POLR2AP24928 1970 aaKnown RBP9.74□□□□□ -0.85
CCDC33-209ENST00000560565 A0A0D9SFI3 127 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 USP17L3A6NCW0 530 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 USP17L4A6NCW7 530 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 GOLIM4O00461 696 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 CPLX1O14810 134 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 RNF113AO15541 343 aaKnown RBP9.73□□□□□ -0.85
CCDC33-209ENST00000560565 RPS6KA5O75582 802 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 URI1O94763 535 aaPredicted RBP9.73□□□□□ -0.85
CCDC33-209ENST00000560565 ITGBL1O95965 494 aaPredicted RBP9.73□□□□□ -0.85
CCDC33-209ENST00000560565 TXLNAP40222 546 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 USP8P40818 1118 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 MCAMP43121 646 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 PHKA1P46020 1223 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 FANCCQ00597 558 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 SCRN1Q12765 414 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 STK3Q13188 491 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 TRIM29Q14134 588 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 SMC1AQ14683 1233 aaKnown RBP9.73□□□□□ -0.85
CCDC33-209ENST00000560565 ERCC6LQ2NKX8 1250 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 USP17L1Q7RTZ2 530 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 TXNRD3Q86VQ6 643 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 LINC00301Q8NCQ3 95 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 CTCFLQ8NI51 663 aaPredicted RBP9.73□□□□□ -0.85
CCDC33-209ENST00000560565 SMARCE1Q969G3 411 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 C8orf76Q96K31 380 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 FAM227BQ96M60 508 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 CTAGE1Q96RT6 745 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 XPO4Q9C0E2 1151 aaKnown RBP9.73□□□□□ -0.85
CCDC33-209ENST00000560565 TMX1Q9H3N1 280 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 MED4Q9NPJ6 270 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 WBP1LQ9NX94 342 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 IFNKQ9P0W0 207 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 DENND2AQ9ULE3 1009 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 ADAMTSL1Q8N6G6 1762 aa9.73□□□□□ -0.85
CCDC33-209ENST00000560565 FAM237AA0A1B0GTK4 181 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 SHTN1A0MZ66 631 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 SNAP23O00161 211 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 KIF5CO60282 957 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 CCDC175P0C221 793 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 ADD1P35611 737 aaKnown RBP9.72□□□□□ -0.85
CCDC33-209ENST00000560565 ZAP70P43403 619 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 UBE3CQ15386 1083 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 ZSCAN26Q16670 478 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 CFAP100Q494V2 611 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 ZMYM1Q5SVZ6 1142 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 RSBN1LQ6PCB5 846 aaPredicted RBP9.72□□□□□ -0.85
CCDC33-209ENST00000560565 SAMD7Q7Z3H4 446 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 FBXO33Q7Z6M2 555 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 VPS37DQ86XT2 251 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 VSTM4Q8IW00 320 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 MLKLQ8NB16 471 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 SPATA5Q8NB90 893 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 AGBL3Q8NEM8 1001 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 FBXO18Q8NFZ0 1043 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 ZC3H15Q8WU90 426 aaKnown RBP9.72□□□□□ -0.85
CCDC33-209ENST00000560565 FBXW7Q969H0 707 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 RPGRIP1Q96KN7 1286 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 USP28Q96RU2 1077 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 PYM1Q9BRP8 204 aaKnown RBP9.72□□□□□ -0.85
CCDC33-209ENST00000560565 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
CCDC33-209ENST00000560565 UBXN6Q9BZV1 441 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 TUBE1Q9UJT0 475 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 PCDHA7Q9UN72 937 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 CEP131Q9UPN4 1083 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 PASKQ96RG2 1323 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 SALL1Q9NSC2 1324 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 FOCADQ5VW36 1801 aa9.72□□□□□ -0.85
CCDC33-209ENST00000560565 ECM29Q5VYK3 1845 aa9.71□□□□□ -0.85
CCDC33-209ENST00000560565 ERICH4A6NGS2 130 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 ZNF202O95125 648 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 KLRK1P26718 216 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 HIBADHP31937 336 aaKnown RBP9.71□□□□□ -0.86
CCDC33-209ENST00000560565 SYKP43405 635 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 HIRAP54198 1017 aaPredicted RBP9.71□□□□□ -0.86
CCDC33-209ENST00000560565 MAP3K9P80192 1104 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 EXOSC10Q01780 885 aaKnown RBP9.71□□□□□ -0.86
CCDC33-209ENST00000560565 PPP2R3AQ06190 1150 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 PDE4CQ08493 712 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 MAP3K12Q12852 859 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 GNL2Q13823 731 aaKnown RBP9.71□□□□□ -0.86
CCDC33-209ENST00000560565 TRIM14Q14142 442 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 IMMTQ16891 758 aaKnown RBP9.71□□□□□ -0.86
CCDC33-209ENST00000560565 TBC1D10BQ4KMP7 808 aaPredicted RBP9.71□□□□□ -0.86
CCDC33-209ENST00000560565 FILIP1LQ4L180 1135 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
CCDC33-209ENST00000560565 STRIP1Q5VSL9 837 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 TTLL5Q6EMB2 1281 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 IQCEQ6IPM2 695 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 CC2D1AQ6P1N0 951 aaPredicted RBP9.71□□□□□ -0.86
CCDC33-209ENST00000560565 ZNF804AQ7Z570 1209 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 TRPM4Q8TD43 1214 aa9.71□□□□□ -0.86
CCDC33-209ENST00000560565 RUBCNQ92622 972 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms