RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 PTPRKQ15262 1439 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 UPK3BL1B0FP48 263 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 UPK3BL2E5RIL1 263 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 CDK11BP21127 795 aaKnown RBP6.22□□□□□ -1.41
TMOD3-207ENST00000560549 RAD51AP2Q09MP3 1159 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 AOC3Q16853 763 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 FBXL19Q6PCT2 694 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 CCDC84Q86UT8 332 aaPredicted RBP6.22□□□□□ -1.41
TMOD3-207ENST00000560549 KRTAP9-9Q9BYP9 154 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 KRTAP9-4Q9BYQ2 154 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 PRDM5Q9NQX1 630 aaPredicted RBP6.22□□□□□ -1.41
TMOD3-207ENST00000560549 CDK11AQ9UQ88 783 aaPredicted RBP6.22□□□□□ -1.41
TMOD3-207ENST00000560549 MAPK8IP1Q9UQF2 711 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 TACC3Q9Y6A5 838 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 LRRIQ1Q96JM4 1722 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 MTUS2Q5JR59 1369 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 SETD5Q9C0A6 1442 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 NCOA2Q15596 1464 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 GRIN3BO60391 1043 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 RNASE1P07998 156 aaKnown RBP6.22□□□□□ -1.41
TMOD3-207ENST00000560549 ZNF865P0CJ78 1059 aaPredicted RBP6.22□□□□□ -1.41
TMOD3-207ENST00000560549 CRKP46108 304 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 C9orf131Q5VYM1 1079 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 CDH24Q86UP0 819 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 MCATQ8IVS2 390 aaKnown RBP6.22□□□□□ -1.41
TMOD3-207ENST00000560549 MFSD2AQ8NA29 543 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 GOLM1Q8NBJ4 401 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 PPP1R13LQ8WUF5 828 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 PRDM7Q9NQW5 492 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 KCNQ5Q9NR82 932 aa6.22□□□□□ -1.41
TMOD3-207ENST00000560549 FGD6Q6ZV73 1430 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 CDK13Q14004 1512 aaKnown RBP6.21□□□□□ -1.42
TMOD3-207ENST00000560549 SCAMP3O14828 347 aaKnown RBP6.21□□□□□ -1.42
TMOD3-207ENST00000560549 CLCN7P51798 805 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 ARHGAP27Q6ZUM4 889 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 ATG4DQ86TL0 474 aaPredicted RBP6.21□□□□□ -1.42
TMOD3-207ENST00000560549 RELL1Q8IUW5 271 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 POU5F2Q8N7G0 328 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 DNAJB8Q8NHS0 232 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 SEMA3GQ9NS98 782 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 ADAMTS1Q9UHI8 967 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 TPX2Q9ULW0 747 aaKnown RBP6.21□□□□□ -1.42
TMOD3-207ENST00000560549 CAPN6Q9Y6Q1 641 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 KIAA0556O60303 1618 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 PITPNM2Q9BZ72 1349 aa6.21□□□□□ -1.42
TMOD3-207ENST00000560549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.2□□□□□ -1.42
TMOD3-207ENST00000560549 PTPRGP23470 1445 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 EPRSP07814 1512 aaKnown RBP6.2□□□□□ -1.42
TMOD3-207ENST00000560549 TLR3O15455 904 aaKnown RBP6.2□□□□□ -1.42
TMOD3-207ENST00000560549 PLCG1P19174 1290 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 SNAP47Q5SQN1 464 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 SLC6A19Q695T7 634 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 OGFOD2Q6N063 350 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 REC114Q7Z4M0 266 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 TMEM87AQ8NBN3 555 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 REV1Q9UBZ9 1251 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 ADAM30Q9UKF2 790 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 ST14Q9Y5Y6 855 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.2□□□□□ -1.42
TMOD3-207ENST00000560549 PRR36Q9H6K5 1346 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 MYOM3Q5VTT5 1437 aa6.2□□□□□ -1.42
TMOD3-207ENST00000560549 GREM1O60565 184 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 TMEM201Q5SNT2 666 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 SFRP5Q5T4F7 317 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 ANGEL2Q5VTE6 544 aaKnown RBP6.19□□□□□ -1.42
TMOD3-207ENST00000560549 SLC23A3Q6PIS1 610 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 FAM196AQ6ZSG2 479 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 MFSD4AQ8N468 514 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 ASB11Q8WXH4 323 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 Q96M66 194 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 HSPA12BQ96MM6 686 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 USP35Q9P2H5 1018 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 CLSPNQ9HAW4 1339 aa6.19□□□□□ -1.42
TMOD3-207ENST00000560549 HTR3BO95264 441 aa6.18□□□□□ -1.42
TMOD3-207ENST00000560549 YBX3P16989 372 aaKnown RBP eCLIP6.18□□□□□ -1.421e-6■□□□□ 10.8
TMOD3-207ENST00000560549 EIF4A3P38919 411 aaKnown RBP6.18□□□□□ -1.42
TMOD3-207ENST00000560549 PDE4BQ07343 736 aa6.18□□□□□ -1.42
TMOD3-207ENST00000560549 TNK2Q07912 1038 aa6.18□□□□□ -1.42
TMOD3-207ENST00000560549 MPP2Q14168 576 aa6.18□□□□□ -1.42
TMOD3-207ENST00000560549 DIEXFQ68CQ4 756 aaKnown RBP6.18□□□□□ -1.42
TMOD3-207ENST00000560549 LRRN4CLQ8ND94 238 aa6.18□□□□□ -1.42
TMOD3-207ENST00000560549 SIN3AQ96ST3 1273 aa6.18□□□□□ -1.42
TMOD3-207ENST00000560549 RC3H2Q9HBD1 1191 aaKnown RBP6.18□□□□□ -1.42
TMOD3-207ENST00000560549 NUP153P49790 1475 aaKnown RBP6.18□□□□□ -1.42
TMOD3-207ENST00000560549 MAPKBP1O60336 1514 aa6.18□□□□□ -1.42
TMOD3-207ENST00000560549 HECW2Q9P2P5 1572 aa6.18□□□□□ -1.42
TMOD3-207ENST00000560549 ADCY10Q96PN6 1610 aa6.18□□□□□ -1.42
TMOD3-207ENST00000560549 GNAT3A8MTJ3 354 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 WASH4PA8MWX3 477 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 CHURC1-FNTBB4DL54 471 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 BIN1O00499 593 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 BPNT1O95861 308 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 CBX7O95931 251 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 PWP1Q13610 501 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 CCDC18Q5T9S5 1454 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 CDKAL1Q5VV42 579 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 EHBP1L1Q8N3D4 1523 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 FAM13CQ8NE31 585 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 FLAD1Q8NFF5 587 aa6.17□□□□□ -1.42
TMOD3-207ENST00000560549 PI4K2BQ8TCG2 481 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms