RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ACER1Q8TDN7 264 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 LPAR1Q92633 364 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 COL25A1Q9BXS0 654 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 C1orf115Q9H7X2 142 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 GPR108Q9NPR9 543 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 RLFQ13129 1914 aa12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 LAMA2P24043 3122 aaKnown RBP12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 DNM1LO00429 736 aa12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 CERS3Q8IU89 383 aa12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 ARRDC4Q8NCT1 418 aa12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 C12orf42Q96LP6 360 aa12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 KIAA1683Q9H0B3 1180 aa12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 TLR7Q9NYK1 1049 aaKnown RBP12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 BTBD7Q9P203 1132 aa12.76□□□□□ -0.37
CDC42BPB-207ENST00000560492 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPB-207ENST00000560492 ATMINO43313 823 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPB-207ENST00000560492 GRB14Q14449 540 aa12.75□□□□□ -0.37
CDC42BPB-207ENST00000560492 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
CDC42BPB-207ENST00000560492 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
CDC42BPB-207ENST00000560492 GUCD1Q96NT3 240 aa12.75□□□□□ -0.37
CDC42BPB-207ENST00000560492 PLSCR2Q9NRY7 297 aa12.75□□□□□ -0.37
CDC42BPB-207ENST00000560492 ZNFX1Q9P2E3 1918 aaKnown RBP12.75□□□□□ -0.37
CDC42BPB-207ENST00000560492 DBNLQ9UJU6 430 aaKnown RBP12.75□□□□□ -0.37
CDC42BPB-207ENST00000560492 ADORA2AP29274 412 aa12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 SEPT2Q15019 361 aa12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 FAM109BQ6ICB4 259 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 NCAPG2Q86XI2 1143 aa12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 FERMT2Q96AC1 680 aa12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 EHD4Q9H223 541 aa12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 SLC5A4Q9NY91 659 aa12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 COL11A1P12107 1806 aaPredicted RBP12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 ZNF236Q9UL36 1845 aa12.74□□□□□ -0.37
CDC42BPB-207ENST00000560492 MAGEB6P1A0A0J9YX57 407 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 IGSF3O75054 1194 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 CYBAP13498 195 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 SHHQ15465 462 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 ITPRIPQ8IWB1 547 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 TRPV1Q8NER1 839 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 MAFAQ8NHW3 353 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 BADQ92934 168 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 ZNF512BQ96KM6 892 aaPredicted RBP12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 MOV10L1Q9BXT6 1211 aaKnown RBP12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 CRNKL1Q9BZJ0 848 aaKnown RBP12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 HOXC10Q9NYD6 342 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 PLXNA1Q9UIW2 1896 aa12.73□□□□□ -0.37
CDC42BPB-207ENST00000560492 STRNO43815 780 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 RAD21O60216 631 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 HOXC6P09630 235 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 ERCC3P19447 782 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 SHMT1P34896 483 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 ADCYAP1R1P41586 468 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 PLCD1P51178 756 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 COG2Q14746 738 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 C9orf50Q5SZB4 431 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 LBX2Q6XYB7 198 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 SLC39A5Q6ZMH5 540 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 AACSQ86V21 672 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 SSH3Q8TE77 659 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 MYLIPQ8WY64 445 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 SPATC1LQ9H0A9 340 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
CDC42BPB-207ENST00000560492 A0A0G2JMZ2 1700 aa12.71□□□□□ -0.37
CDC42BPB-207ENST00000560492 SMCHD1A6NHR9 2005 aa12.71□□□□□ -0.37
CDC42BPB-207ENST00000560492 SEPT4O43236 478 aa12.71□□□□□ -0.37
CDC42BPB-207ENST00000560492 FLOT1O75955 427 aa12.71□□□□□ -0.37
CDC42BPB-207ENST00000560492 PRAMEF19Q5SWL8 479 aa12.71□□□□□ -0.37
CDC42BPB-207ENST00000560492 OLFML2BQ68BL8 750 aa12.71□□□□□ -0.37
CDC42BPB-207ENST00000560492 EAF2Q96CJ1 260 aaPredicted RBP12.71□□□□□ -0.37
CDC42BPB-207ENST00000560492 CDX2Q99626 313 aaPredicted RBP12.71□□□□□ -0.37
CDC42BPB-207ENST00000560492 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
CDC42BPB-207ENST00000560492 EYSQ5T1H1 3165 aa12.71□□□□□ -0.38
CDC42BPB-207ENST00000560492 FOSL2P15408 326 aa12.7□□□□□ -0.38
CDC42BPB-207ENST00000560492 SPICE1Q8N0Z3 855 aa12.7□□□□□ -0.38
CDC42BPB-207ENST00000560492 RNPC3Q96LT9 517 aaKnown RBP12.7□□□□□ -0.38
CDC42BPB-207ENST00000560492 DNAJC2Q99543 621 aaKnown RBP12.7□□□□□ -0.38
CDC42BPB-207ENST00000560492 SH2D4AQ9H788 454 aa12.7□□□□□ -0.38
CDC42BPB-207ENST00000560492 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
CDC42BPB-207ENST00000560492 EXOC6BQ9Y2D4 811 aa12.7□□□□□ -0.38
CDC42BPB-207ENST00000560492 PARP14Q460N5 1801 aa12.69□□□□□ -0.38
CDC42BPB-207ENST00000560492 APBB1O00213 710 aa12.69□□□□□ -0.38
CDC42BPB-207ENST00000560492 MAP3K13O43283 966 aa12.69□□□□□ -0.38
CDC42BPB-207ENST00000560492 COBLO75128 1261 aa12.69□□□□□ -0.38
CDC42BPB-207ENST00000560492 RARBP10826 455 aa12.69□□□□□ -0.38
CDC42BPB-207ENST00000560492 FCER1AP12319 257 aa12.69□□□□□ -0.38
CDC42BPB-207ENST00000560492 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
CDC42BPB-207ENST00000560492 LRRC41Q15345 812 aa12.69□□□□□ -0.38
CDC42BPB-207ENST00000560492 TTF1Q15361 905 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPB-207ENST00000560492 FAM47AQ5JRC9 791 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms