RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 RBPJLQ9UBG7 517 aa18.15■□□□□ 0.5
SNRPA1-210ENST00000560383 BAZ2AQ9UIF9 1905 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 USP17L15C9J2P7 530 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 USP17L13C9JLJ4 530 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 USP17L11C9JVI0 530 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 USP17L18D6R9N7 530 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 USP17L22D6RA61 530 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 USP17L17D6RBQ6 530 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 USP17L19D6RCP7 530 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 USP17L20D6RJB6 530 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 AKR1B1P15121 316 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 USP17L24Q0WX57 530 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 LBX2Q6XYB7 198 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 SIAH1Q8IUQ4 282 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 TRMT44Q8IYL2 757 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 IFNL3Q8IZI9 196 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 DEFB118Q96PH6 123 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 NUDT12Q9BQG2 462 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 HELLSQ9NRZ9 838 aa18.14■□□□□ 0.49
SNRPA1-210ENST00000560383 A0A0G2JMZ2 1700 aa18.13■□□□□ 0.49
SNRPA1-210ENST00000560383 A0A1W2PRG0 241 aa18.13■□□□□ 0.49
SNRPA1-210ENST00000560383 H0YGN5 161 aa18.13■□□□□ 0.49
SNRPA1-210ENST00000560383 MPHOSPH10O00566 681 aaKnown RBP18.13■□□□□ 0.49
SNRPA1-210ENST00000560383 FOXP2O15409 715 aa18.13■□□□□ 0.49
SNRPA1-210ENST00000560383 VCAM1P19320 739 aa18.13■□□□□ 0.49
SNRPA1-210ENST00000560383 NACAP1Q9BZK3 213 aa18.13■□□□□ 0.49
SNRPA1-210ENST00000560383 RABGAP1Q9Y3P9 1069 aa18.13■□□□□ 0.49
SNRPA1-210ENST00000560383 RPTORQ8N122 1335 aa18.13■□□□□ 0.49
SNRPA1-210ENST00000560383 APPP05067 770 aa18.12■□□□□ 0.49
SNRPA1-210ENST00000560383 TDO2P48775 406 aa18.12■□□□□ 0.49
SNRPA1-210ENST00000560383 ZYXQ15942 572 aaKnown RBP18.12■□□□□ 0.49
SNRPA1-210ENST00000560383 MAP3K21Q5TCX8 1036 aa18.12■□□□□ 0.49
SNRPA1-210ENST00000560383 POTEEQ6S8J3 1075 aa18.12■□□□□ 0.49
SNRPA1-210ENST00000560383 CATSPERGQ6ZRH7 1159 aa18.12■□□□□ 0.49
SNRPA1-210ENST00000560383 ANKLE1Q8NAG6 615 aa18.12■□□□□ 0.49
SNRPA1-210ENST00000560383 TRIB2Q92519 343 aa18.12■□□□□ 0.49
SNRPA1-210ENST00000560383 DPF3Q92784 378 aa18.12■□□□□ 0.49
SNRPA1-210ENST00000560383 MINDY4BA8MYZ0 360 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 TFRCP02786 760 aaKnown RBP18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 RASA1P20936 1047 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 CCNA1P78396 465 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 GPR142Q7Z601 462 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 USP6NLQ92738 828 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 PAGR1Q9BTK6 254 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 PORCNQ9H237 461 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 KANSL2Q9H9L4 492 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 HMX1Q9NP08 348 aaPredicted RBP18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 TMX2Q9Y320 296 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 ZNF236Q9UL36 1845 aa18.11■□□□□ 0.49
SNRPA1-210ENST00000560383 RLFQ13129 1914 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 ALPK3Q96L96 1907 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 A0A0D9SFI3 127 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 TRIM6-TRIM34B2RNG4 842 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 PDE4AP27815 886 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 RGS2P41220 211 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 ICA1Q05084 483 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 Q3C1V9 767 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 MORN1Q5T089 497 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 CCDC129Q6ZRS4 1044 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 PLEKHH3Q7Z736 793 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 CCAR1Q8IX12 1150 aaKnown RBP18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 FAM227BQ96M60 508 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 APBA2Q99767 749 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 COLQQ9Y215 455 aaPredicted RBP18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 NR2E3Q9Y5X4 410 aa18.1■□□□□ 0.49
SNRPA1-210ENST00000560383 PEX10O60683 326 aa18.09■□□□□ 0.49
SNRPA1-210ENST00000560383 CNMDO75829 334 aa18.09■□□□□ 0.49
SNRPA1-210ENST00000560383 ALX1Q15699 326 aa18.09■□□□□ 0.49
SNRPA1-210ENST00000560383 MCMDC2Q4G0Z9 681 aa18.09■□□□□ 0.49
SNRPA1-210ENST00000560383 LPAR1Q92633 364 aa18.09■□□□□ 0.49
SNRPA1-210ENST00000560383 NAPBQ9H115 298 aa18.09■□□□□ 0.49
SNRPA1-210ENST00000560383 ZNF287Q9HBT7 754 aa18.09■□□□□ 0.49
SNRPA1-210ENST00000560383 PARP14Q460N5 1801 aa18.09■□□□□ 0.49
SNRPA1-210ENST00000560383 FRMPD3Q5JV73 1810 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 SPDYE16A6NNV3 312 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 ZKSCAN1P17029 563 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 SDSP20132 328 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 CYP2B6P20813 491 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 TRIM32Q13049 653 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 NMIQ13287 307 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 VPS53Q5VIR6 699 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 CLEC10AQ8IUN9 316 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 RILPL2Q969X0 211 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 RPAP3Q9H6T3 665 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 SH2D4AQ9H788 454 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 MKNK2Q9HBH9 465 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 ARHGEF10LQ9HCE6 1279 aa18.08■□□□□ 0.48
SNRPA1-210ENST00000560383 IGKV6D-41A0A0C4DH26 115 aa18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 EEF2P13639 858 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 PRKAR2AP13861 404 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 FXR1P51114 621 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 PPARAQ07869 468 aa18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 MAP2K5Q13163 448 aa18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 KIAA1755Q5JYT7 1200 aa18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 NECAB2Q7Z6G3 386 aa18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 VCPKMTQ9H867 229 aa18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 CWC22Q9HCG8 908 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 ANAPC4Q9UJX5 808 aa18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 OGDHLQ9ULD0 1010 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms