RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 A0A1W2PRG0 241 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 TESPA1A2RU30 521 aaPredicted RBP14.4□□□□□ -0.1
USP8-209ENST00000560297 RPS6KB1P23443 525 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 LIFRP42702 1097 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 VEGFBP49765 207 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 ANTXR2P58335 489 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 SREBF2Q12772 1141 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 MKRN3Q13064 507 aaKnown RBP14.4□□□□□ -0.1
USP8-209ENST00000560297 GRM1Q13255 1194 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 MTMR2Q13614 643 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 WTAPQ15007 396 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 TMEM67Q5HYA8 995 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 IFIT1BQ5T764 474 aaKnown RBP14.4□□□□□ -0.1
USP8-209ENST00000560297 RCSD1Q6JBY9 416 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 CHST3Q7LGC8 479 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 FBXL16Q8N461 479 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 ENAHQ8N8S7 591 aaPredicted RBP14.4□□□□□ -0.1
USP8-209ENST00000560297 PROCA1Q8NCQ7 364 aaPredicted RBP14.4□□□□□ -0.1
USP8-209ENST00000560297 LPAR1Q92633 364 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 TBC1D32Q96NH3 1257 aa14.4□□□□□ -0.1
USP8-209ENST00000560297 F5H6K3 240 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 HMGCS2P54868 508 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 FGD1P98174 961 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 KIF23Q02241 960 aaPredicted RBP14.39□□□□□ -0.11
USP8-209ENST00000560297 KLRC3Q07444 240 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 SEC23AQ15436 765 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 OTUD7BQ6GQQ9 843 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 CLEC10AQ8IUN9 316 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 GMCL1P1Q8NEA9 526 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 C12orf42Q96LP6 360 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 TMEM47Q9BQJ4 181 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 VCPKMTQ9H867 229 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 KAT14Q9H8E8 782 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 EMILIN3Q9NT22 766 aa14.39□□□□□ -0.11
USP8-209ENST00000560297 LAMA4Q16363 1823 aa14.38□□□□□ -0.11
USP8-209ENST00000560297 CCL15-CCL14A0A0B4J2E2 113 aa14.38□□□□□ -0.11
USP8-209ENST00000560297 TM4SF4P48230 202 aa14.38□□□□□ -0.11
USP8-209ENST00000560297 CCL15Q16663 113 aa14.38□□□□□ -0.11
USP8-209ENST00000560297 SH2B2O14492 632 aaPredicted RBP14.37□□□□□ -0.11
USP8-209ENST00000560297 PABPC4Q13310 644 aaKnown RBP eCLIP14.37□□□□□ -0.11
USP8-209ENST00000560297 ZYXQ15942 572 aaKnown RBP14.37□□□□□ -0.11
USP8-209ENST00000560297 GADL1Q6ZQY3 521 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 SGMS1Q86VZ5 419 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 LRRC47Q8N1G4 583 aaKnown RBP14.37□□□□□ -0.11
USP8-209ENST00000560297 PNMA1Q8ND90 353 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 BRI3BPQ8WY22 251 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 UPF3BQ9BZI7 483 aaKnown RBP14.37□□□□□ -0.11
USP8-209ENST00000560297 ALDH8A1Q9H2A2 487 aaPredicted RBP14.37□□□□□ -0.11
USP8-209ENST00000560297 LY9Q9HBG7 655 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 ZCCHC17Q9NP64 241 aaKnown RBP14.37□□□□□ -0.11
USP8-209ENST00000560297 PDRG1Q9NUG6 133 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 AGTPBP1Q9UPW5 1226 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 SLC45A1Q9Y2W3 748 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 DOCK1Q14185 1865 aa14.37□□□□□ -0.11
USP8-209ENST00000560297 CCDC69A6NI79 296 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 WDR46O15213 610 aaKnown RBP14.36□□□□□ -0.11
USP8-209ENST00000560297 RAD21O60216 631 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 AOC2O75106 756 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 NDUFB10O96000 172 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 CPA1P15085 419 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 HOXA7P31268 230 aaPredicted RBP14.36□□□□□ -0.11
USP8-209ENST00000560297 MOGSQ13724 837 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 COL9A3Q14050 684 aaPredicted RBP14.36□□□□□ -0.11
USP8-209ENST00000560297 ANKRD1Q15327 319 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 Q6ZUG5 572 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 CATIPQ7Z7H3 387 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 DNAJC5GQ8N7S2 189 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 GMCL1Q96IK5 515 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 KIF2CQ99661 725 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 LRRC2Q9BYS8 371 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 AGXT2Q9BYV1 514 aa14.36□□□□□ -0.11
USP8-209ENST00000560297 USP17L15C9J2P7 530 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 BTBD19C9JJ37 291 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 USP17L13C9JLJ4 530 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 USP17L11C9JVI0 530 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 USP17L18D6R9N7 530 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 USP17L22D6RA61 530 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 USP17L17D6RBQ6 530 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 USP17L19D6RCP7 530 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 USP17L20D6RJB6 530 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 ALDH1A1P00352 501 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 VCAM1P19320 739 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 DSG3P32926 999 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 SLC1A4P43007 532 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 NEK4P51957 841 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 USP17L24Q0WX57 530 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 RABEP1Q15276 862 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 GPAT2Q6NUI2 795 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 SPICE1Q8N0Z3 855 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 DCAF4Q8WV16 495 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 ZIC5Q96T25 663 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 MAP3K14Q99558 947 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 PTPN18Q99952 460 aa14.35□□□□□ -0.11
USP8-209ENST00000560297 SLC12A7Q9Y666 1083 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms