RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 SCTRP47872 440 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 PTPN12Q05209 780 aaKnown RBP7.59□□□□□ -1.19
CLPX-206ENST00000560166 BMP2KLQ5H9B9 411 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 SUSD4Q5VX71 490 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 USPL1Q5W0Q7 1092 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 TPTE2Q6XPS3 522 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 DNAJC14Q6Y2X3 702 aaPredicted RBP7.59□□□□□ -1.19
CLPX-206ENST00000560166 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLPX-206ENST00000560166 RHPN1Q8TCX5 695 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 SETDB2Q96T68 719 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 LNPKQ9C0E8 428 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 GPR108Q9NPR9 543 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 TPSG1Q9NRR2 321 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 STAP2Q9UGK3 403 aa7.59□□□□□ -1.19
CLPX-206ENST00000560166 FGFR3P22607 806 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 IL15P40933 162 aaPredicted RBP7.58□□□□□ -1.2
CLPX-206ENST00000560166 G3BP1Q13283 466 aaKnown RBP eCLIP7.58□□□□□ -1.24e-7■■□□□ 13.8
CLPX-206ENST00000560166 SF3B3Q15393 1217 aaKnown RBP7.58□□□□□ -1.2
CLPX-206ENST00000560166 CCDC57Q2TAC2 916 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 CCDC152Q4G0S7 254 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 DALRD3Q5D0E6 543 aaKnown RBP7.58□□□□□ -1.2
CLPX-206ENST00000560166 CHSY3Q70JA7 882 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 CLASRPQ8N2M8 674 aaKnown RBP7.58□□□□□ -1.2
CLPX-206ENST00000560166 NLGN1Q8N2Q7 840 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 TTLL11Q8NHH1 800 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 TRIM11Q96F44 468 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 FAM89AQ96GI7 184 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 ABHD17AQ96GS6 310 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 PIM2Q9P1W9 311 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 EXOC6BQ9Y2D4 811 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 PARP3Q9Y6F1 533 aa7.58□□□□□ -1.2
CLPX-206ENST00000560166 TTC41PQ6P2S7 1318 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 ANKRD18BA2A2Z9 1011 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 H3BRB1 525 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 EYA2O00167 538 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 BNIP3LO60238 219 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 GYS1P13807 737 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 RGS3P49796 1198 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 IFIT5Q13325 482 aaKnown RBP7.57□□□□□ -1.2
CLPX-206ENST00000560166 OS9Q13438 667 aaPredicted RBP7.57□□□□□ -1.2
CLPX-206ENST00000560166 NOM1Q5C9Z4 860 aaKnown RBP7.57□□□□□ -1.2
CLPX-206ENST00000560166 TBC1D9BQ66K14 1250 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 TICAM2Q86XR7 235 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 GPATCH3Q96I76 525 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 TUT1Q9H6E5 874 aaKnown RBP7.57□□□□□ -1.2
CLPX-206ENST00000560166 SEPT3Q9UH03 358 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 SRP68Q9UHB9 627 aaKnown RBP7.57□□□□□ -1.2
CLPX-206ENST00000560166 KIAA1551Q9HCM1 1747 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 UBR3Q6ZT12 1888 aa7.57□□□□□ -1.2
CLPX-206ENST00000560166 AFDNP55196 1824 aaKnown RBP7.57□□□□□ -1.2
CLPX-206ENST00000560166 PCNTO95613 3336 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 C4AP0C0L4 1744 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 UNCXA6NJT0 531 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 MX1P20591 662 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 TM4SF1P30408 202 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 PDE1AP54750 535 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 NFIXQ14938 502 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 PRSS36Q5K4E3 855 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 CYP2U1Q7Z449 544 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 NBPF5PQ86XG9 351 aaPredicted RBP7.56□□□□□ -1.2
CLPX-206ENST00000560166 GTF3C2Q8WUA4 911 aaPredicted RBP7.56□□□□□ -1.2
CLPX-206ENST00000560166 CDC5LQ99459 802 aaKnown RBP7.56□□□□□ -1.2
CLPX-206ENST00000560166 PLVAPQ9BX97 442 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 ZNF358Q9NW07 568 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 NUP98P52948 1817 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 ABCC12Q96J65 1359 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 LAMB2P55268 1798 aa7.56□□□□□ -1.2
CLPX-206ENST00000560166 KIF13BQ9NQT8 1826 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 RBM47A0AV96 593 aaKnown RBP7.55□□□□□ -1.2
CLPX-206ENST00000560166 GLTPD2A6NH11 291 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 M0R2N6 131 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 ERC2O15083 957 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 GLRX3O76003 335 aaKnown RBP7.55□□□□□ -1.2
CLPX-206ENST00000560166 SASH1O94885 1247 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 STAU1O95793 577 aaKnown RBP7.55□□□□□ -1.2
CLPX-206ENST00000560166 ERCC3P19447 782 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 WEE1P30291 646 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 TAF7LQ5H9L4 462 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 TTC22Q5TAA0 569 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 CAPN12Q6ZSI9 719 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 ATG9AQ7Z3C6 839 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 GLYCTKQ8IVS8 523 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 PGBD3Q8N328 593 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 CNBD1Q8NA66 436 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 JARID2Q92833 1246 aaPredicted RBP7.55□□□□□ -1.2
CLPX-206ENST00000560166 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 BACH2Q9BYV9 841 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 GREM2Q9H772 168 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 EGFL7Q9UHF1 273 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 PA2G4Q9UQ80 394 aaKnown RBP7.55□□□□□ -1.2
CLPX-206ENST00000560166 AKAP2Q9Y2D5 859 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 CNTNAP1P78357 1384 aa7.55□□□□□ -1.2
CLPX-206ENST00000560166 MROH5Q6ZUA9 1318 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 KLRG2A4D1S0 409 aaPredicted RBP7.54□□□□□ -1.2
CLPX-206ENST00000560166 ICMTO60725 284 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 IFIT2P09913 472 aaKnown RBP7.54□□□□□ -1.2
CLPX-206ENST00000560166 HSPA8P11142 646 aaKnown RBP7.54□□□□□ -1.2
CLPX-206ENST00000560166 HCLS1P14317 486 aaPredicted RBP7.54□□□□□ -1.2
CLPX-206ENST00000560166 KCNA3P22001 575 aa7.54□□□□□ -1.2
CLPX-206ENST00000560166 GTF2E1P29083 439 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms