RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 EFCC1Q9HA90 598 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 ZCCHC17Q9NP64 241 aaKnown RBP10.13□□□□□ -0.79
USP3-217ENST00000560070 MTMR4Q9NYA4 1195 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 PNMA3Q9UL41 463 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 TAOK2Q9UL54 1235 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 SLC45A1Q9Y2W3 748 aa10.13□□□□□ -0.79
USP3-217ENST00000560070 IGKV6D-41A0A0C4DH26 115 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 F5H6K3 240 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 HOXA7P31268 230 aaPredicted RBP10.12□□□□□ -0.79
USP3-217ENST00000560070 SLC4A3P48751 1232 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 HERVK_113P62684 666 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 KLRC3Q07444 240 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 Q3C1V9 767 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 FAM83BQ5T0W9 1011 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 OTOP1Q7RTM1 612 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 SH2D4AQ9H788 454 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 VCPKMTQ9H867 229 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 ANO2Q9NQ90 1003 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 IL17RBQ9NRM6 502 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 PLSCR2Q9NRY7 297 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 NYAP2Q9P242 653 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 RBPJLQ9UBG7 517 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 STX8Q9UNK0 236 aa10.12□□□□□ -0.79
USP3-217ENST00000560070 B4E1Z4 1266 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 ORC4O43929 436 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 KDM4AO75164 1064 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 CDC45O75419 566 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 FLOT1O75955 427 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 TTLL1O95922 423 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 MCCP23508 829 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 CTGFP29279 349 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 LACTBP83111 547 aaPredicted RBP10.11□□□□□ -0.79
USP3-217ENST00000560070 COG2Q14746 738 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 SLFN13Q68D06 897 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 LHX8Q68G74 356 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 CASC1Q6TDU7 716 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 STAG1Q8WVM7 1258 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 TRIM47Q96LD4 638 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 C12orf42Q96LP6 360 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 RNF41Q9H4P4 317 aaPredicted RBP10.11□□□□□ -0.79
USP3-217ENST00000560070 GOPCQ9HD26 462 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 TXNRD2Q9NNW7 524 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 FBXO28Q9NVF7 368 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 RBM8AQ9Y5S9 174 aaKnown RBP10.11□□□□□ -0.79
USP3-217ENST00000560070 TAF6LQ9Y6J9 622 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 ROBO3Q96MS0 1386 aa10.11□□□□□ -0.79
USP3-217ENST00000560070 NEDD4P46934 1319 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 RAD50Q92878 1312 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 CCDC85CA6NKD9 419 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 PITPNM1O00562 1244 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 NDUFB10O96000 172 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
USP3-217ENST00000560070 CYP21A2P08686 494 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 FGRP09769 529 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 BCRP11274 1271 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 GCLCP48506 637 aaPredicted RBP10.1□□□□□ -0.79
USP3-217ENST00000560070 IKQ13123 557 aaPredicted RBP10.1□□□□□ -0.79
USP3-217ENST00000560070 PLS1Q14651 629 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 ARHGEF6Q15052 776 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 NOM1Q5C9Z4 860 aaKnown RBP10.1□□□□□ -0.79
USP3-217ENST00000560070 WDR78Q5VTH9 848 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 POTEEQ6S8J3 1075 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 CHST3Q7LGC8 479 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 CCAR1Q8IX12 1150 aaKnown RBP10.1□□□□□ -0.79
USP3-217ENST00000560070 GPRC5AQ8NFJ5 357 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 ESR2Q92731 530 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 MAP4K1Q92918 833 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 MKL1Q969V6 931 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 ATG4CQ96DT6 458 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 LSG1Q9H089 658 aaKnown RBP10.1□□□□□ -0.79
USP3-217ENST00000560070 CWC22Q9HCG8 908 aaKnown RBP10.1□□□□□ -0.79
USP3-217ENST00000560070 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 ZSWIM5Q9P217 1185 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 MAST2Q6P0Q8 1798 aa10.1□□□□□ -0.79
USP3-217ENST00000560070 ADGRA2Q96PE1 1338 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 MYO5AQ9Y4I1 1855 aaKnown RBP10.09□□□□□ -0.79
USP3-217ENST00000560070 E7EWF7 191 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 CNMDO75829 334 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 FCGRTP55899 365 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 SNAP25P60880 206 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 KCTD1Q719H9 257 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 CYB5R4Q7L1T6 521 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 ABHD8Q96I13 439 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 TMEM47Q9BQJ4 181 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 GPCPD1Q9NPB8 672 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 BTBD7Q9P203 1132 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 GABRQQ9UN88 632 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 PTPN22Q9Y2R2 807 aa10.09□□□□□ -0.79
USP3-217ENST00000560070 ZMYM6O95789 1325 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 ECM29Q5VYK3 1845 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
USP3-217ENST00000560070 TMEM232C9JQI7 657 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 TNPO2O14787 897 aaKnown RBP10.08□□□□□ -0.8
USP3-217ENST00000560070 SLC27A2O14975 620 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 WDR46O15213 610 aaKnown RBP10.08□□□□□ -0.8
USP3-217ENST00000560070 BMP3P12645 472 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 HOXD10P28358 340 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 SLC1A4P43007 532 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 TRDNQ13061 729 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms