RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 MORN1Q5T089 497 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 ANKRD45Q5TZF3 282 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 CLEC10AQ8IUN9 316 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 TRIB2Q92519 343 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 LPAR1Q92633 364 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 GCC1Q96CN9 775 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 DEFB118Q96PH6 123 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 BTBD7Q9P203 1132 aa24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 GREB1LQ9C091 1923 aaPredicted RBP24.52■■□□□ 1.52
CHRNA3-207ENST00000559941 M0R2C6 588 aa24.51■■□□□ 1.51
CHRNA3-207ENST00000559941 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.51■■□□□ 1.51
CHRNA3-207ENST00000559941 VCPKMTQ9H867 229 aa24.51■■□□□ 1.51
CHRNA3-207ENST00000559941 HOXC10Q9NYD6 342 aa24.51■■□□□ 1.51
CHRNA3-207ENST00000559941 ZBTB47Q9UFB7 747 aaPredicted RBP24.51■■□□□ 1.51
CHRNA3-207ENST00000559941 PARP14Q460N5 1801 aa24.51■■□□□ 1.51
CHRNA3-207ENST00000559941 RGS2P41220 211 aa24.5■■□□□ 1.51
CHRNA3-207ENST00000559941 TRIM32Q13049 653 aa24.5■■□□□ 1.51
CHRNA3-207ENST00000559941 AAMPQ13685 434 aa24.5■■□□□ 1.51
CHRNA3-207ENST00000559941 TRMT44Q8IYL2 757 aaKnown RBP24.5■■□□□ 1.51
CHRNA3-207ENST00000559941 CRISPLD2Q9H0B8 497 aa24.5■■□□□ 1.51
CHRNA3-207ENST00000559941 RPTORQ8N122 1335 aa24.5■■□□□ 1.51
CHRNA3-207ENST00000559941 A0A0G2JMZ2 1700 aa24.49■■□□□ 1.51
CHRNA3-207ENST00000559941 TFRCP02786 760 aaKnown RBP24.49■■□□□ 1.51
CHRNA3-207ENST00000559941 FSD1Q9BTV5 496 aa24.49■■□□□ 1.51
CHRNA3-207ENST00000559941 TANGO6Q9C0B7 1094 aa24.49■■□□□ 1.51
CHRNA3-207ENST00000559941 KANSL2Q9H9L4 492 aa24.49■■□□□ 1.51
CHRNA3-207ENST00000559941 CWC22Q9HCG8 908 aaKnown RBP24.49■■□□□ 1.51
CHRNA3-207ENST00000559941 EPB41L4AQ9HCS5 686 aaPredicted RBP24.49■■□□□ 1.51
CHRNA3-207ENST00000559941 HMX1Q9NP08 348 aaPredicted RBP24.49■■□□□ 1.51
CHRNA3-207ENST00000559941 ROBO3Q96MS0 1386 aa24.49■■□□□ 1.51
CHRNA3-207ENST00000559941 MINDY4BA8MYZ0 360 aa24.48■■□□□ 1.51
CHRNA3-207ENST00000559941 PATL2C9JE40 543 aaKnown RBP24.48■■□□□ 1.51
CHRNA3-207ENST00000559941 FARP2O94887 1054 aaPredicted RBP24.48■■□□□ 1.51
CHRNA3-207ENST00000559941 EEF2P13639 858 aaKnown RBP24.48■■□□□ 1.51
CHRNA3-207ENST00000559941 MAP3K21Q5TCX8 1036 aa24.48■■□□□ 1.51
CHRNA3-207ENST00000559941 SLC34A2O95436 690 aa24.47■■□□□ 1.51
CHRNA3-207ENST00000559941 DSG3P32926 999 aa24.47■■□□□ 1.51
CHRNA3-207ENST00000559941 MAP2K5Q13163 448 aa24.47■■□□□ 1.51
CHRNA3-207ENST00000559941 ZMYM1Q5SVZ6 1142 aa24.47■■□□□ 1.51
CHRNA3-207ENST00000559941 IFNL3Q8IZI9 196 aa24.47■■□□□ 1.51
CHRNA3-207ENST00000559941 SEC62Q99442 399 aaKnown RBP24.47■■□□□ 1.51
CHRNA3-207ENST00000559941 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.47■■□□□ 1.51
CHRNA3-207ENST00000559941 MKNK2Q9HBH9 465 aa24.47■■□□□ 1.51
CHRNA3-207ENST00000559941 STAP2Q9UGK3 403 aa24.47■■□□□ 1.51
CHRNA3-207ENST00000559941 SLC15A5A6NIM6 579 aa24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 WDR46O15213 610 aaKnown RBP24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 APPP05067 770 aa24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 ZKSCAN1P17029 563 aaPredicted RBP24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 RASA1P20936 1047 aa24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 PTPREP23469 700 aa24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 TDO2P48775 406 aa24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 SPICE1Q8N0Z3 855 aa24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 APBA2Q99767 749 aa24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 HTATIP2Q9BUP3 242 aa24.46■■□□□ 1.51
CHRNA3-207ENST00000559941 ATP2B2Q01814 1243 aa24.45■■□□□ 1.5
CHRNA3-207ENST00000559941 CCL14Q16627 93 aa24.45■■□□□ 1.5
CHRNA3-207ENST00000559941 WDR78Q5VTH9 848 aa24.45■■□□□ 1.5
CHRNA3-207ENST00000559941 STK11IPQ8N1F8 1099 aa24.45■■□□□ 1.5
CHRNA3-207ENST00000559941 MB21D1Q8N884 522 aa24.45■■□□□ 1.5
CHRNA3-207ENST00000559941 IVNS1ABPQ9Y6Y0 642 aa24.45■■□□□ 1.5
CHRNA3-207ENST00000559941 COL11A1P12107 1806 aaPredicted RBP24.45■■□□□ 1.5
CHRNA3-207ENST00000559941 MYH4Q9Y623 1939 aa24.44■■□□□ 1.5
CHRNA3-207ENST00000559941 FLOT1O75955 427 aa24.44■■□□□ 1.5
CHRNA3-207ENST00000559941 PRKAR2AP13861 404 aaKnown RBP24.44■■□□□ 1.5
CHRNA3-207ENST00000559941 PDE1AP54750 535 aa24.44■■□□□ 1.5
CHRNA3-207ENST00000559941 DPF3Q92784 378 aa24.44■■□□□ 1.5
CHRNA3-207ENST00000559941 MOV10L1Q9BXT6 1211 aaKnown RBP24.44■■□□□ 1.5
CHRNA3-207ENST00000559941 NACAP1Q9BZK3 213 aa24.44■■□□□ 1.5
CHRNA3-207ENST00000559941 SPATC1LQ9H0A9 340 aa24.44■■□□□ 1.5
CHRNA3-207ENST00000559941 CACNB2Q08289 660 aaPredicted RBP24.43■■□□□ 1.5
CHRNA3-207ENST00000559941 GRB14Q14449 540 aa24.43■■□□□ 1.5
CHRNA3-207ENST00000559941 ANKLE1Q8NAG6 615 aa24.43■■□□□ 1.5
CHRNA3-207ENST00000559941 SHCBP1Q8NEM2 672 aa24.43■■□□□ 1.5
CHRNA3-207ENST00000559941 ATG4CQ96DT6 458 aa24.43■■□□□ 1.5
CHRNA3-207ENST00000559941 ZNF287Q9HBT7 754 aa24.43■■□□□ 1.5
CHRNA3-207ENST00000559941 GOPCQ9HD26 462 aa24.43■■□□□ 1.5
CHRNA3-207ENST00000559941 ZNFX1Q9P2E3 1918 aaKnown RBP24.43■■□□□ 1.5
CHRNA3-207ENST00000559941 ZNF236Q9UL36 1845 aa24.42■■□□□ 1.5
CHRNA3-207ENST00000559941 HOXC6P09630 235 aa24.42■■□□□ 1.5
CHRNA3-207ENST00000559941 EVI5LQ96CN4 794 aa24.42■■□□□ 1.5
CHRNA3-207ENST00000559941 NYAP2Q9P242 653 aa24.42■■□□□ 1.5
CHRNA3-207ENST00000559941 H0YGN5 161 aa24.41■■□□□ 1.5
CHRNA3-207ENST00000559941 STRNO43815 780 aa24.41■■□□□ 1.5
CHRNA3-207ENST00000559941 RWDD1Q9H446 243 aaPredicted RBP24.41■■□□□ 1.5
CHRNA3-207ENST00000559941 ALPK3Q96L96 1907 aa24.4■■□□□ 1.5
CHRNA3-207ENST00000559941 SMC5Q8IY18 1101 aa24.4■■□□□ 1.5
CHRNA3-207ENST00000559941 ZNF444Q8N0Y2 327 aaPredicted RBP24.4■■□□□ 1.5
CHRNA3-207ENST00000559941 PAWRQ96IZ0 340 aaKnown RBP24.4■■□□□ 1.5
CHRNA3-207ENST00000559941 NAPBQ9H115 298 aa24.4■■□□□ 1.5
CHRNA3-207ENST00000559941 OGDHLQ9ULD0 1010 aa24.4■■□□□ 1.5
CHRNA3-207ENST00000559941 ADAMTS5Q9UNA0 930 aa24.4■■□□□ 1.5
CHRNA3-207ENST00000559941 IGKV6D-41A0A0C4DH26 115 aa24.39■■□□□ 1.49
CHRNA3-207ENST00000559941 PRDM1O75626 825 aa24.39■■□□□ 1.49
CHRNA3-207ENST00000559941 ERCC3P19447 782 aa24.39■■□□□ 1.49
CHRNA3-207ENST00000559941 NECAB2Q7Z6G3 386 aa24.39■■□□□ 1.49
CHRNA3-207ENST00000559941 NPLOC4Q8TAT6 608 aa24.39■■□□□ 1.49
CHRNA3-207ENST00000559941 MROH8Q9H579 483 aa24.39■■□□□ 1.49
CHRNA3-207ENST00000559941 FBXO28Q9NVF7 368 aa24.39■■□□□ 1.49
CHRNA3-207ENST00000559941 FLRT1Q9NZU1 646 aa24.39■■□□□ 1.49
CHRNA3-207ENST00000559941 RAD21O60216 631 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms