RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 NR1D1P20393 614 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 TNFRSF8P28908 595 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 STX17P56962 302 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 XRCC4Q13426 336 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 CUL4BQ13620 913 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 RBBP5Q15291 538 aaKnown RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 TSR1Q2NL82 804 aaKnown RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 CFAP58Q5T655 872 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 KCTD16Q68DU8 428 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 KLHL10Q6JEL2 608 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 ZNF572Q7Z3I7 529 aaPredicted RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 FNBP4Q8N3X1 1017 aaPredicted RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 OR8K1Q8NGG5 319 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 CCDC26Q8TAB7 109 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 P3H4Q92791 437 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 SAAL1Q96ER3 474 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 CHP1Q99653 195 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 HAUS2Q9NVX0 235 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 LIMA1Q9UHB6 759 aaKnown RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 DMGDHQ9UI17 866 aaKnown RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 E7EVH7 732 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 RNF225M0QZC1 329 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 ZNF185O15231 689 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 PPP1R12BO60237 982 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 MGRN1O60291 552 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 PTPREP23469 700 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 SEC24CP53992 1094 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 SPAG1Q07617 926 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 TRIM29Q14134 588 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 LACTB2Q53H82 288 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 CDCA2Q69YH5 1023 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 CD302Q8IX05 232 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 GRAMD1CQ8IYS0 662 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 IQCKQ8N0W5 287 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 ZNF579Q8NAF0 562 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 SPDL1Q96EA4 605 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 CYFIP2Q96F07 1278 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 LRRC1Q9BTT6 524 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 KIF9Q9HAQ2 790 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 JADE2Q9NQC1 790 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 PRR36Q9H6K5 1346 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 PALLDQ8WX93 1383 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 DNM1LO00429 736 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 ACTN4O43707 911 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 IDEP14735 1019 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 CDC25AP30304 524 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 CCT6AP40227 531 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 PIP4K2AP48426 406 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 HERVK_113P62684 666 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 TFCP2Q12800 502 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 TRAF1Q13077 416 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 SLMAPQ14BN4 828 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 KRT31Q15323 416 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 GLE1Q53GS7 698 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 ANKRD20A8PQ5CZ79 823 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 TMED8Q6PL24 325 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 TTLL7Q6ZT98 887 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 TXNDC2Q86VQ3 553 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 KIRREL3Q8IZU9 778 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 ARFGAP2Q8N6H7 521 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 RASSF8Q8NHQ8 419 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 KLHDC4Q8TBB5 520 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 LMBR1Q8WVP7 490 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 ITFG2Q969R8 447 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 AIFM3Q96NN9 605 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 COPRSQ9NQ92 184 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 CPSF2Q9P2I0 782 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 RIPOR2Q9Y4F9 1068 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 ACEP12821 1306 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 RIMBP3CA6NJZ7 1639 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 RIMBP3BA6NNM3 1639 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 RIMBP3Q9UFD9 1639 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 EME2A4GXA9 379 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 HMGB1P1B2RPK0 211 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 MPHOSPH10O00566 681 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 SKAP2O75563 359 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 SNUPNO95149 360 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 CD44P16070 742 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 VAV2P52735 878 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 COPB1P53618 953 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 SEMA3FQ13275 785 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 EZH2Q15910 746 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 STK11IPQ8N1F8 1099 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 MICAL1Q8TDZ2 1067 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 HDAC7Q8WUI4 952 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 TCP11Q8WWU5 503 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 CCDC47Q96A33 483 aaKnown RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 ATP6V1G3Q96LB4 118 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 FAM210AQ96ND0 272 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 HINFPQ9BQA5 517 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 DBNDD2Q9BQY9 259 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 STIM2Q9P246 746 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 FBXO2Q9UK22 296 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-217ENST00000559858 SH3BP1Q9Y3L3 701 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 NALCNQ8IZF0 1738 aa7.43□□□□□ -1.22
ZEB1-217ENST00000559858 FMN2Q9NZ56 1722 aa7.42□□□□□ -1.22
ZEB1-217ENST00000559858 PLEKHG3A1L390 1219 aa7.42□□□□□ -1.22
ZEB1-217ENST00000559858 GMNCA6NCL1 334 aa7.42□□□□□ -1.22
ZEB1-217ENST00000559858 PPP1R3GB7ZBB8 358 aa7.42□□□□□ -1.22
ZEB1-217ENST00000559858 PES1O00541 588 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms