RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 HHIPQ96QV1 700 aa8.8□□□□□ -1
ZEB1-216ENST00000559496 LGR6Q9HBX8 967 aa8.8□□□□□ -1
ZEB1-216ENST00000559496 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
ZEB1-216ENST00000559496 SOX13Q9UN79 622 aa8.8□□□□□ -1
ZEB1-216ENST00000559496 SLIT2O94813 1529 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 VIRMAQ69YN4 1812 aaKnown RBP8.79□□□□□ -1
ZEB1-216ENST00000559496 PLIN1O60240 522 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 BCAR3O75815 825 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 WISP1O95388 367 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 HSP90AA1P07900 732 aaKnown RBP8.79□□□□□ -1
ZEB1-216ENST00000559496 SERPINB4P48594 390 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 TAF7Q15545 349 aaPredicted RBP8.79□□□□□ -1
ZEB1-216ENST00000559496 DUOXA2Q1HG44 320 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 ACAD11Q709F0 780 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 GLYCTKQ8IVS8 523 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 ZCRB1Q8TBF4 217 aaKnown RBP8.79□□□□□ -1
ZEB1-216ENST00000559496 C8orf37Q96NL8 207 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 ZKSCAN3Q9BRR0 538 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 BABAM1Q9NWV8 329 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 MIS18AQ9NYP9 233 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 PCDH11XQ9BZA7 1347 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 PCDH11YQ9BZA8 1340 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 LRP6O75581 1613 aa8.79□□□□□ -1
ZEB1-216ENST00000559496 SCO2A0A1W2PP80 73 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 H3BRB1 525 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 CYP27B1O15528 508 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 HSP90AB1P08238 724 aaKnown RBP8.78□□□□□ -1
ZEB1-216ENST00000559496 ARL4DP49703 201 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 TWISTNBQ3B726 338 aaPredicted RBP8.78□□□□□ -1
ZEB1-216ENST00000559496 SLC51AQ86UW1 340 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 TSPYL6Q8N831 410 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 C8orf58Q8NAV2 365 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 RETREG2Q8NC44 543 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 BSNDQ8WZ55 320 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 ZNF428Q96B54 188 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 BCL2L13Q9BXK5 485 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 TUT1Q9H6E5 874 aaKnown RBP8.78□□□□□ -1
ZEB1-216ENST00000559496 SMC4Q9NTJ3 1288 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 ADAMTS7Q9UKP4 1686 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 SCN11AQ9UI33 1791 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 DISP2A7MBM2 1401 aa8.78□□□□□ -1
ZEB1-216ENST00000559496 KDM6AO15550 1401 aaPredicted RBP8.78□□□□□ -1
ZEB1-216ENST00000559496 ELL2O00472 640 aaPredicted RBP8.77□□□□□ -1.01
ZEB1-216ENST00000559496 DDX3YO15523 660 aaKnown RBP8.77□□□□□ -1.01
ZEB1-216ENST00000559496 VAMP4O75379 141 aa8.77□□□□□ -1.01
ZEB1-216ENST00000559496 CANXP27824 592 aaKnown RBP8.77□□□□□ -1.01
ZEB1-216ENST00000559496 MEX3CQ5U5Q3 659 aaKnown RBP8.77□□□□□ -1.01
ZEB1-216ENST00000559496 KIAA1211Q6ZU35 1233 aa8.77□□□□□ -1.01
ZEB1-216ENST00000559496 UNC5CLQ8IV45 518 aa8.77□□□□□ -1.01
ZEB1-216ENST00000559496 SSH1Q8WYL5 1049 aa8.77□□□□□ -1.01
ZEB1-216ENST00000559496 UBL7Q96S82 380 aaPredicted RBP8.77□□□□□ -1.01
ZEB1-216ENST00000559496 CEP41Q9BYV8 373 aa8.77□□□□□ -1.01
ZEB1-216ENST00000559496 ZFP64Q9NPA5 681 aa8.77□□□□□ -1.01
ZEB1-216ENST00000559496 CCDC9Q9Y3X0 531 aaKnown RBP8.77□□□□□ -1.01
ZEB1-216ENST00000559496 WNK3Q9BYP7 1800 aa8.77□□□□□ -1.01
ZEB1-216ENST00000559496 SPATA31A1Q5TZJ5 1347 aa8.77□□□□□ -1.01
ZEB1-216ENST00000559496 SHANK3Q9BYB0 1731 aa8.77□□□□□ -1.01
ZEB1-216ENST00000559496 BTBD11A6QL63 1104 aa8.76□□□□□ -1.01
ZEB1-216ENST00000559496 ADAM11O75078 769 aa8.76□□□□□ -1.01
ZEB1-216ENST00000559496 LRP8Q14114 963 aa8.76□□□□□ -1.01
ZEB1-216ENST00000559496 KRT24Q2M2I5 525 aa8.76□□□□□ -1.01
ZEB1-216ENST00000559496 ALDH1L2Q3SY69 923 aa8.76□□□□□ -1.01
ZEB1-216ENST00000559496 PEAR1Q5VY43 1037 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-216ENST00000559496 DDX54Q8TDD1 881 aaKnown RBP8.76□□□□□ -1.01
ZEB1-216ENST00000559496 FOXD4L4Q8WXT5 416 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-216ENST00000559496 FRAT1Q92837 279 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-216ENST00000559496 BHLHE41Q9C0J9 482 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-216ENST00000559496 THRAP3Q9Y2W1 955 aaKnown RBP8.76□□□□□ -1.01
ZEB1-216ENST00000559496 SPATA31A5Q5VU36 1347 aa8.76□□□□□ -1.01
ZEB1-216ENST00000559496 SPATA31A7Q8IWB4 1347 aa8.76□□□□□ -1.01
ZEB1-216ENST00000559496 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-216ENST00000559496 KDM3BQ7LBC6 1761 aa8.76□□□□□ -1.01
ZEB1-216ENST00000559496 ARHGAP4P98171 946 aa8.75□□□□□ -1.01
ZEB1-216ENST00000559496 SLC7A3Q8WY07 619 aa8.75□□□□□ -1.01
ZEB1-216ENST00000559496 SLC52A2Q9HAB3 445 aa8.75□□□□□ -1.01
ZEB1-216ENST00000559496 KIF16BQ96L93 1317 aa8.75□□□□□ -1.01
ZEB1-216ENST00000559496 MRC1P22897 1456 aa8.75□□□□□ -1.01
ZEB1-216ENST00000559496 BCL9LQ86UU0 1499 aa8.75□□□□□ -1.01
ZEB1-216ENST00000559496 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.75□□□□□ -1.01
ZEB1-216ENST00000559496 TNS2Q63HR2 1409 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 SOS1Q07889 1333 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-216ENST00000559496 EXOC5O00471 708 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 SOX1O00570 391 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-216ENST00000559496 NDUFB5O43674 189 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 NCLP19338 710 aaKnown RBP8.74□□□□□ -1.01
ZEB1-216ENST00000559496 C19orf57Q0VDD7 668 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 IKBKEQ14164 716 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 VPS72Q15906 364 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 C20orf194Q5TEA3 1177 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 ZKSCAN2Q63HK3 967 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 VN1R5Q7Z5H4 357 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 CITED4Q96RK1 184 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 LATS2Q9NRM7 1088 aa8.74□□□□□ -1.01
ZEB1-216ENST00000559496 TCERG1O14776 1098 aaKnown RBP8.73□□□□□ -1.01
ZEB1-216ENST00000559496 IPO8O15397 1037 aaKnown RBP8.73□□□□□ -1.01
ZEB1-216ENST00000559496 DHX15O43143 795 aaKnown RBP8.73□□□□□ -1.01
ZEB1-216ENST00000559496 KCNQ3O43525 872 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 EIF4A1P60842 406 aaKnown RBP8.73□□□□□ -1.01
ZEB1-216ENST00000559496 PDE3AQ14432 1141 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 UVSSAQ2YD98 709 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms