RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
PSEN1-224ENST00000559361 MAGEB6Q8N7X4 407 aa20.1■□□□□ 0.81
PSEN1-224ENST00000559361 NOL10Q9BSC4 688 aaKnown RBP20.1■□□□□ 0.81
PSEN1-224ENST00000559361 EMILIN3Q9NT22 766 aa20.1■□□□□ 0.81
PSEN1-224ENST00000559361 BAG3O95817 575 aa20.09■□□□□ 0.81
PSEN1-224ENST00000559361 PLCG2P16885 1265 aa20.09■□□□□ 0.81
PSEN1-224ENST00000559361 CYP7A1P22680 504 aa20.09■□□□□ 0.81
PSEN1-224ENST00000559361 MAP2K5Q13163 448 aa20.09■□□□□ 0.81
PSEN1-224ENST00000559361 APPBP2Q92624 585 aa20.09■□□□□ 0.81
PSEN1-224ENST00000559361 ZBTB21Q9ULJ3 1066 aa20.09■□□□□ 0.81
PSEN1-224ENST00000559361 ZNF532Q9HCE3 1301 aa20.08■□□□□ 0.81
PSEN1-224ENST00000559361 MYO5AQ9Y4I1 1855 aaKnown RBP20.08■□□□□ 0.81
PSEN1-224ENST00000559361 CASC1Q6TDU7 716 aa20.08■□□□□ 0.81
PSEN1-224ENST00000559361 DIAPH3Q9NSV4 1193 aa20.08■□□□□ 0.81
PSEN1-224ENST00000559361 AATFQ9NY61 560 aaKnown RBP eCLIP20.08■□□□□ 0.81
PSEN1-224ENST00000559361 RABGAP1Q9Y3P9 1069 aa20.08■□□□□ 0.81
PSEN1-224ENST00000559361 FLT1P17948 1338 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 CDH23Q9H251 3354 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 TCRBV5S4A2TA0A5A2 114 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 CNMDO75829 334 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 GDF11O95390 407 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 IGHA2P01877 340 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L2Q6R6M4 530 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 CCAR1Q8IX12 1150 aaKnown RBP20.07■□□□□ 0.8
PSEN1-224ENST00000559361 TGFBRAP1Q8WUH2 860 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 RUFY2Q8WXA3 655 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 C12orf42Q96LP6 360 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 PAGR1Q9BTK6 254 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 SENP6Q9GZR1 1112 aaPredicted RBP20.07■□□□□ 0.8
PSEN1-224ENST00000559361 FLRT1Q9NZU1 646 aa20.07■□□□□ 0.8
PSEN1-224ENST00000559361 RLFQ13129 1914 aa20.06■□□□□ 0.8
PSEN1-224ENST00000559361 HOXC6P09630 235 aa20.06■□□□□ 0.8
PSEN1-224ENST00000559361 ADGRA1Q86SQ6 560 aa20.06■□□□□ 0.8
PSEN1-224ENST00000559361 MAPKAPK5Q8IW41 473 aa20.06■□□□□ 0.8
PSEN1-224ENST00000559361 HELLSQ9NRZ9 838 aa20.06■□□□□ 0.8
PSEN1-224ENST00000559361 PALD1Q9ULE6 856 aa20.06■□□□□ 0.8
PSEN1-224ENST00000559361 LTBP2Q14767 1821 aa20.06■□□□□ 0.8
PSEN1-224ENST00000559361 RAD50Q92878 1312 aa20.05■□□□□ 0.8
PSEN1-224ENST00000559361 MFAP1P55081 439 aaKnown RBP20.05■□□□□ 0.8
PSEN1-224ENST00000559361 ZMYM1Q5SVZ6 1142 aa20.05■□□□□ 0.8
PSEN1-224ENST00000559361 MFSD14CQ5VZR4 134 aa20.05■□□□□ 0.8
PSEN1-224ENST00000559361 LPAR1Q92633 364 aa20.05■□□□□ 0.8
PSEN1-224ENST00000559361 LBHD1Q9BQE6 289 aaPredicted RBP20.05■□□□□ 0.8
PSEN1-224ENST00000559361 DDX20Q9UHI6 824 aaKnown RBP20.05■□□□□ 0.8
PSEN1-224ENST00000559361 SLC15A5A6NIM6 579 aa20.04■□□□□ 0.8
PSEN1-224ENST00000559361 MSCO60682 206 aa20.04■□□□□ 0.8
PSEN1-224ENST00000559361 EIF5BO60841 1220 aaKnown RBP20.04■□□□□ 0.8
PSEN1-224ENST00000559361 CDC45O75419 566 aa20.04■□□□□ 0.8
PSEN1-224ENST00000559361 PTPREP23469 700 aa20.04■□□□□ 0.8
PSEN1-224ENST00000559361 LBX2Q6XYB7 198 aa20.04■□□□□ 0.8
PSEN1-224ENST00000559361 CRACR2BQ8N4Y2 399 aaPredicted RBP20.04■□□□□ 0.8
PSEN1-224ENST00000559361 MYH1P12882 1939 aa20.04■□□□□ 0.8
PSEN1-224ENST00000559361 MAGEB6P1A0A0J9YX57 407 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L15C9J2P7 530 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L13C9JLJ4 530 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L11C9JVI0 530 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L18D6R9N7 530 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L22D6RA61 530 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L17D6RBQ6 530 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L19D6RCP7 530 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L20D6RJB6 530 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 DNM1LO00429 736 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 CHMLP26374 656 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 CCNA1P78396 465 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 USP17L24Q0WX57 530 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 TATDN1Q6P1N9 297 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 CATSPERGQ6ZRH7 1159 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 FAM161BQ96MY7 647 aa20.03■□□□□ 0.8
PSEN1-224ENST00000559361 GH2P01242 217 aa20.02■□□□□ 0.8
PSEN1-224ENST00000559361 GNAT2P19087 354 aa20.02■□□□□ 0.8
PSEN1-224ENST00000559361 GRB14Q14449 540 aa20.02■□□□□ 0.8
PSEN1-224ENST00000559361 MCMDC2Q4G0Z9 681 aa20.02■□□□□ 0.8
PSEN1-224ENST00000559361 ZNF697Q5TEC3 545 aa20.02■□□□□ 0.8
PSEN1-224ENST00000559361 TRPV1Q8NER1 839 aa20.02■□□□□ 0.8
PSEN1-224ENST00000559361 NPLOC4Q8TAT6 608 aa20.02■□□□□ 0.8
PSEN1-224ENST00000559361 RIOK1Q9BRS2 568 aaKnown RBP20.02■□□□□ 0.8
PSEN1-224ENST00000559361 TRIM34Q9BYJ4 488 aa20.02■□□□□ 0.8
PSEN1-224ENST00000559361 ATN1P54259 1190 aaPredicted RBP20.01■□□□□ 0.79
PSEN1-224ENST00000559361 RTP1P59025 263 aa20.01■□□□□ 0.79
PSEN1-224ENST00000559361 OSBP2Q969R2 916 aa20.01■□□□□ 0.79
PSEN1-224ENST00000559361 CDX2Q99626 313 aaPredicted RBP20.01■□□□□ 0.79
PSEN1-224ENST00000559361 CRNKL1Q9BZJ0 848 aaKnown RBP20.01■□□□□ 0.79
PSEN1-224ENST00000559361 BTBD7Q9P203 1132 aa20.01■□□□□ 0.79
PSEN1-224ENST00000559361 HLA-DOAP06340 250 aa20■□□□□ 0.79
PSEN1-224ENST00000559361 ATP2B2Q01814 1243 aa20■□□□□ 0.79
PSEN1-224ENST00000559361 NMIQ13287 307 aaPredicted RBP20■□□□□ 0.79
PSEN1-224ENST00000559361 MIGA1Q8NAN2 632 aa20■□□□□ 0.79
PSEN1-224ENST00000559361 KIAA1683Q9H0B3 1180 aa20■□□□□ 0.79
PSEN1-224ENST00000559361 PUS7LQ9H0K6 701 aaKnown RBP20■□□□□ 0.79
PSEN1-224ENST00000559361 SEMA6BQ9H3T3 888 aa20■□□□□ 0.79
PSEN1-224ENST00000559361 SMCHD1A6NHR9 2005 aa19.99■□□□□ 0.79
PSEN1-224ENST00000559361 A0A0D9SFI3 127 aa19.99■□□□□ 0.79
PSEN1-224ENST00000559361 GPAA1O43292 621 aa19.99■□□□□ 0.79
PSEN1-224ENST00000559361 MBD4O95243 580 aa19.99■□□□□ 0.79
PSEN1-224ENST00000559361 CYBAP13498 195 aa19.99■□□□□ 0.79
PSEN1-224ENST00000559361 CYP2C19P33261 490 aa19.99■□□□□ 0.79
PSEN1-224ENST00000559361 USP14P54578 494 aa19.99■□□□□ 0.79
PSEN1-224ENST00000559361 SHHQ15465 462 aa19.99■□□□□ 0.79
PSEN1-224ENST00000559361 CWC27Q6UX04 472 aaKnown RBP19.99■□□□□ 0.79
PSEN1-224ENST00000559361 FAM227BQ96M60 508 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms