RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, humanhuman

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-204ENST00000559077 ERC1Q8IUD2 1116 aa10.32□□□□□ -0.76
RNF111-204ENST00000559077 SSH3Q8TE77 659 aa10.32□□□□□ -0.76
RNF111-204ENST00000559077 PPP1R12CQ9BZL4 782 aa10.32□□□□□ -0.76
RNF111-204ENST00000559077 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
RNF111-204ENST00000559077 KCNH4Q9UQ05 1017 aa10.32□□□□□ -0.76
RNF111-204ENST00000559077 LRRFIP2Q9Y608 721 aaKnown RBP10.32□□□□□ -0.76
RNF111-204ENST00000559077 LAMB2P55268 1798 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 RAB11FIP3O75154 756 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 NTSR2O95665 410 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 GYS1P13807 737 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 TXKP42681 527 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 ST5P78524 1137 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 ZNF827Q17R98 1081 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 SLC10A5Q5PT55 438 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 NBPF5PQ86XG9 351 aaPredicted RBP10.31□□□□□ -0.76
RNF111-204ENST00000559077 CALR3Q96L12 384 aaKnown RBP10.31□□□□□ -0.76
RNF111-204ENST00000559077 RNF112Q9ULX5 631 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 UBN2Q6ZU65 1347 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 PNPLA7Q6ZV29 1317 aa10.31□□□□□ -0.76
RNF111-204ENST00000559077 IRS4O14654 1257 aaPredicted RBP10.3□□□□□ -0.76
RNF111-204ENST00000559077 NPHP1O15259 732 aa10.3□□□□□ -0.76
RNF111-204ENST00000559077 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
RNF111-204ENST00000559077 GPTP24298 496 aa10.3□□□□□ -0.76
RNF111-204ENST00000559077 CCDC152Q4G0S7 254 aa10.3□□□□□ -0.76
RNF111-204ENST00000559077 SMC5Q8IY18 1101 aa10.3□□□□□ -0.76
RNF111-204ENST00000559077 FMR1NBQ8N0W7 255 aaPredicted RBP10.3□□□□□ -0.76
RNF111-204ENST00000559077 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
RNF111-204ENST00000559077 SLC6A14Q9UN76 642 aa10.3□□□□□ -0.76
RNF111-204ENST00000559077 KDM2BQ8NHM5 1336 aa10.3□□□□□ -0.76
RNF111-204ENST00000559077 TUBGCP6Q96RT7 1819 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 CSF1RP07333 972 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 TM4SF1P30408 202 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 SEC13P55735 322 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 CTSWP56202 376 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 TYRO3Q06418 890 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 PTK7Q13308 1070 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 CCDC57Q2TAC2 916 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 SUSD4Q5VX71 490 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 TBC1D9BQ66K14 1250 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 PSAPL1Q6NUJ1 521 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 DEFB132Q7Z7B7 95 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 COL23A1Q86Y22 540 aaPredicted RBP10.29□□□□□ -0.76
RNF111-204ENST00000559077 SCG3Q8WXD2 468 aaKnown RBP10.29□□□□□ -0.76
RNF111-204ENST00000559077 SUCLG2Q96I99 432 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 SUSD3Q96L08 255 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 C2orf49Q9BVC5 232 aaPredicted RBP10.29□□□□□ -0.76
RNF111-204ENST00000559077 BICC1Q9H694 974 aaKnown RBP10.29□□□□□ -0.76
RNF111-204ENST00000559077 DCTPP1Q9H773 170 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 ANKIB1Q9P2G1 1089 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 SRP68Q9UHB9 627 aaKnown RBP10.29□□□□□ -0.76
RNF111-204ENST00000559077 NOP58Q9Y2X3 529 aaKnown RBP10.29□□□□□ -0.76
RNF111-204ENST00000559077 CHMP3Q9Y3E7 222 aa10.29□□□□□ -0.76
RNF111-204ENST00000559077 IREB2P48200 963 aaKnown RBP10.28□□□□□ -0.76
RNF111-204ENST00000559077 DPYDQ12882 1025 aa10.28□□□□□ -0.76
RNF111-204ENST00000559077 IFIT5Q13325 482 aaKnown RBP10.28□□□□□ -0.76
RNF111-204ENST00000559077 NFIXQ14938 502 aa10.28□□□□□ -0.76
RNF111-204ENST00000559077 ALDH16A1Q8IZ83 802 aa10.28□□□□□ -0.76
RNF111-204ENST00000559077 FAM89AQ96GI7 184 aa10.28□□□□□ -0.76
RNF111-204ENST00000559077 CDC5LQ99459 802 aaKnown RBP10.28□□□□□ -0.76
RNF111-204ENST00000559077 COPRSQ9NQ92 184 aa10.28□□□□□ -0.76
RNF111-204ENST00000559077 MYH3P11055 1940 aa10.28□□□□□ -0.76
RNF111-204ENST00000559077 ANKRD18BA2A2Z9 1011 aa10.27□□□□□ -0.77
RNF111-204ENST00000559077 RGS9O75916 674 aaPredicted RBP10.27□□□□□ -0.77
RNF111-204ENST00000559077 CIAO1O76071 339 aa10.27□□□□□ -0.77
RNF111-204ENST00000559077 SSTR4P31391 388 aa10.27□□□□□ -0.77
RNF111-204ENST00000559077 FOXO4P98177 505 aa10.27□□□□□ -0.77
RNF111-204ENST00000559077 SF3B3Q15393 1217 aaKnown RBP10.27□□□□□ -0.77
RNF111-204ENST00000559077 LMBR1LQ6UX01 489 aa10.27□□□□□ -0.77
RNF111-204ENST00000559077 TMC4Q7Z404 712 aa10.27□□□□□ -0.77
RNF111-204ENST00000559077 KIF1BPQ96EK5 621 aa10.27□□□□□ -0.77
RNF111-204ENST00000559077 C1orf115Q9H7X2 142 aa10.27□□□□□ -0.77
RNF111-204ENST00000559077 RBM19Q9Y4C8 960 aaKnown RBP10.27□□□□□ -0.77
RNF111-204ENST00000559077 NRXN2Q9P2S2 1712 aa10.27□□□□□ -0.77
RNF111-204ENST00000559077 POLRMTO00411 1230 aaKnown RBP10.26□□□□□ -0.77
RNF111-204ENST00000559077 SERPINB2P05120 415 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 G3BP1Q13283 466 aaKnown RBP eCLIP10.26□□□□□ -0.77
RNF111-204ENST00000559077 TAF7LQ5H9L4 462 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 B4GALNT3Q6L9W6 998 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 AMIGO3Q86WK7 504 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 SIRT2Q8IXJ6 389 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 STAG2Q8N3U4 1231 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 TTLL11Q8NHH1 800 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 WFDC12Q8WWY7 111 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 KAZALD1Q96I82 304 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 PNMA5Q96PV4 448 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 SSBP4Q9BWG4 385 aaPredicted RBP10.26□□□□□ -0.77
RNF111-204ENST00000559077 BRIP1Q9BX63 1249 aa10.26□□□□□ -0.77
RNF111-204ENST00000559077 PNMA6EA0A0J9YXQ4 647 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L15C9J2P7 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L10C9JJH3 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L13C9JLJ4 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L12C9JPN9 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L11C9JVI0 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L21D6R901 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L18D6R9N7 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L22D6RA61 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L17D6RBQ6 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L19D6RCP7 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 USP17L20D6RJB6 530 aa10.25□□□□□ -0.77
RNF111-204ENST00000559077 YBX3P16989 372 aaKnown RBP eCLIP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms