RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 COL2A1P02458 1487 aaPredicted RBP8.63□□□□□ -1.03
AC090888.3-201ENST00000558917 IBTKQ9P2D0 1353 aaPredicted RBP8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 EFSO43281 561 aa8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 CCL5P13501 91 aa8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 INHBEP58166 350 aa8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 LAMC2Q13753 1193 aa8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 FAM109BQ6ICB4 259 aaPredicted RBP8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 LRRC69Q6ZNQ3 347 aa8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 NPM2Q86SE8 214 aaKnown RBP8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 CDX2Q99626 313 aaPredicted RBP8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 NEUROD4Q9HD90 331 aa8.62□□□□□ -1.03
AC090888.3-201ENST00000558917 SPDYE3A6NKU9 549 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 SKIP12755 728 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 TCIRG1Q13488 830 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 PRRT3Q5FWE3 981 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 TTLL7Q6ZT98 887 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 USP38Q8NB14 1042 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 MYOZ2Q9NPC6 264 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 SCHIP1Q9P0W5 487 aaPredicted RBP8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 ANGEL1Q9UNK9 670 aaKnown RBP8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 ZNF232Q9UNY5 417 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 NOD1Q9Y239 953 aa8.61□□□□□ -1.03
AC090888.3-201ENST00000558917 BBOX1O75936 387 aa8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 HMOX1P09601 288 aa8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 ZBTB48P10074 688 aaPredicted RBP8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 SYN1P17600 705 aa8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 GTF2IP78347 998 aa8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 SLC10A5Q5PT55 438 aa8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 ZMYM1Q5SVZ6 1142 aa8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 ZNF34Q8IZ26 560 aa8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 DIS3LQ8TF46 1054 aaKnown RBP8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 ZDHHC1Q8WTX9 485 aa8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 U2AF1L4Q8WU68 220 aaKnown RBP8.6□□□□□ -1.03
AC090888.3-201ENST00000558917 REV3LO60673 3130 aa8.59□□□□□ -1.03
AC090888.3-201ENST00000558917 NOS2P35228 1153 aa8.59□□□□□ -1.03
AC090888.3-201ENST00000558917 ARMC9Q7Z3E5 817 aa8.59□□□□□ -1.03
AC090888.3-201ENST00000558917 C7orf61Q8IZ16 206 aa8.59□□□□□ -1.03
AC090888.3-201ENST00000558917 BRI3BPQ8WY22 251 aa8.59□□□□□ -1.03
AC090888.3-201ENST00000558917 ZNF358Q9NW07 568 aa8.59□□□□□ -1.03
AC090888.3-201ENST00000558917 DDX60Q8IY21 1712 aaKnown RBP8.59□□□□□ -1.03
AC090888.3-201ENST00000558917 PSME4Q14997 1843 aa8.59□□□□□ -1.03
AC090888.3-201ENST00000558917 ANKRD36CQ5JPF3 1778 aa8.58□□□□□ -1.04
AC090888.3-201ENST00000558917 XIRP2A4UGR9 3374 aa8.58□□□□□ -1.04
AC090888.3-201ENST00000558917 GPSM2P81274 684 aa8.58□□□□□ -1.04
AC090888.3-201ENST00000558917 TEAD4Q15561 434 aa8.58□□□□□ -1.04
AC090888.3-201ENST00000558917 MAP3K11Q16584 847 aa8.58□□□□□ -1.04
AC090888.3-201ENST00000558917 TBCELQ5QJ74 424 aa8.58□□□□□ -1.04
AC090888.3-201ENST00000558917 MYLIPQ8WY64 445 aa8.58□□□□□ -1.04
AC090888.3-201ENST00000558917 RNF208Q9H0X6 261 aa8.58□□□□□ -1.04
AC090888.3-201ENST00000558917 WDFY4Q6ZS81 3184 aa8.58□□□□□ -1.04
AC090888.3-201ENST00000558917 CFAP54Q96N23 3096 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 MAP3K15Q6ZN16 1313 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 CACNA1GO43497 2377 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 ERVV-1B6SEH8 477 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 M0R082 166 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 WNT10BO00744 389 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 SIN3BO75182 1162 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 HCLS1P14317 486 aaPredicted RBP8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 LACTBP83111 547 aaPredicted RBP8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 SFSWAPQ12872 951 aaKnown RBP8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 GRAPQ13588 217 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 FAM43AQ8N2R8 423 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 NGEFQ8N5V2 710 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 AGBL3Q8NEM8 1001 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 ZNF417Q8TAU3 575 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 GRAPLQ8TC17 118 aaPredicted RBP8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 PAWRQ96IZ0 340 aaKnown RBP8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 ZNF587Q96SQ5 575 aaPredicted RBP8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 MXD3Q9BW11 206 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 TMX4Q9H1E5 349 aaPredicted RBP8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 CEMIPQ8WUJ3 1361 aa8.57□□□□□ -1.04
AC090888.3-201ENST00000558917 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 EML1O00423 815 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 SASH1O94885 1247 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 SGPL1O95470 568 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 GRK4P32298 578 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 TEFQ10587 303 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 NCOA4Q13772 614 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 SLC9A9Q8IVB4 645 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 TBC1D16Q8TBP0 767 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 SLC30A3Q99726 388 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 UBE2OQ9C0C9 1292 aaKnown RBP8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 TTYH1Q9H313 450 aaPredicted RBP8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 RIPOR2Q9Y4F9 1068 aa8.56□□□□□ -1.04
AC090888.3-201ENST00000558917 OTOFQ9HC10 1997 aa8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 SERTM1A2A2V5 107 aa8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 LZTS3O60299 673 aaPredicted RBP8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 SLC24A1O60721 1099 aa8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 SNRPA1P09661 255 aaKnown RBP8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 NF2P35240 595 aa8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 TRIM28Q13263 835 aaKnown RBP8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 TAF1CQ15572 869 aaPredicted RBP8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 RSPO4Q2I0M5 234 aaPredicted RBP8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 DEPDC4Q8N2C3 294 aa8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 RHPN1Q8TCX5 695 aa8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 CELF1Q92879 486 aaKnown RBP8.55□□□□□ -1.04
AC090888.3-201ENST00000558917 PSMG3-AS1Q96PY0 264 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms