RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 CCDC7Q96M83 1385 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 USP54Q70EL1 1684 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 KIF20BQ96Q89 1820 aa5.78□□□□□ -1.48
SPG11-211ENST00000558561 DISP2A7MBM2 1401 aa5.78□□□□□ -1.48
SPG11-211ENST00000558561 WISP1O95388 367 aa5.78□□□□□ -1.48
SPG11-211ENST00000558561 GDF11O95390 407 aa5.78□□□□□ -1.48
SPG11-211ENST00000558561 EIF4A2Q14240 407 aaKnown RBP5.78□□□□□ -1.48
SPG11-211ENST00000558561 IGF2-ASQ6U949 168 aa5.78□□□□□ -1.48
SPG11-211ENST00000558561 SMIM5Q71RC9 77 aa5.78□□□□□ -1.48
SPG11-211ENST00000558561 MORC1Q86VD1 984 aa5.78□□□□□ -1.48
SPG11-211ENST00000558561 ZFYVE1Q9HBF4 777 aa5.78□□□□□ -1.48
SPG11-211ENST00000558561 GPN3Q9UHW5 284 aaPredicted RBP5.78□□□□□ -1.48
SPG11-211ENST00000558561 BLMP54132 1417 aaPredicted RBP5.77□□□□□ -1.49
SPG11-211ENST00000558561 IL2RBP14784 551 aa5.77□□□□□ -1.49
SPG11-211ENST00000558561 MTHFSP49914 203 aa5.77□□□□□ -1.49
SPG11-211ENST00000558561 MRPL58Q14197 206 aaKnown RBP5.77□□□□□ -1.49
SPG11-211ENST00000558561 TMEM151AQ8N4L1 468 aa5.77□□□□□ -1.49
SPG11-211ENST00000558561 LENG1Q96BZ8 264 aaPredicted RBP5.77□□□□□ -1.49
SPG11-211ENST00000558561 TRIM56Q9BRZ2 755 aaKnown RBP5.77□□□□□ -1.49
SPG11-211ENST00000558561 SOX17Q9H6I2 414 aaPredicted RBP5.77□□□□□ -1.49
SPG11-211ENST00000558561 TMEM39AQ9NV64 488 aa5.77□□□□□ -1.49
SPG11-211ENST00000558561 TTF2Q9UNY4 1162 aaKnown RBP5.77□□□□□ -1.49
SPG11-211ENST00000558561 NINLQ9Y2I6 1382 aa5.77□□□□□ -1.49
SPG11-211ENST00000558561 CGNL1Q0VF96 1302 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 FAM208AQ9UK61 1670 aaKnown RBP5.76□□□□□ -1.49
SPG11-211ENST00000558561 MEGF6O75095 1541 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 C1QTNF9BB2RNN3 333 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 CYP27B1O15528 508 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 PAGE1O75459 146 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 ALX3O95076 343 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 ECEL1O95672 775 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 DLGAP3O95886 979 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 IL13P35225 146 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 CHRNA4P43681 627 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 DDX10Q13206 875 aaKnown RBP5.76□□□□□ -1.49
SPG11-211ENST00000558561 R3HDM1Q15032 1099 aaKnown RBP5.76□□□□□ -1.49
SPG11-211ENST00000558561 DUOXA2Q1HG44 320 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 ALYREFQ86V81 257 aaKnown RBP5.76□□□□□ -1.49
SPG11-211ENST00000558561 CD163Q86VB7 1156 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 ZCRB1Q8TBF4 217 aaKnown RBP5.76□□□□□ -1.49
SPG11-211ENST00000558561 STK35Q8TDR2 534 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 UBASH3BQ8TF42 649 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 NECAB3Q96P71 396 aaPredicted RBP5.76□□□□□ -1.49
SPG11-211ENST00000558561 USP26Q9BXU7 913 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 NRSN2Q9GZP1 204 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 KIAA1522Q9P206 1035 aaPredicted RBP5.76□□□□□ -1.49
SPG11-211ENST00000558561 PPM1HQ9ULR3 514 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 KNSTRNQ9Y448 316 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 INSRP06213 1382 aa5.76□□□□□ -1.49
SPG11-211ENST00000558561 PARP4Q9UKK3 1724 aaKnown RBP5.76□□□□□ -1.49
SPG11-211ENST00000558561 LRRC37A3O60309 1634 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 TNS1Q9HBL0 1735 aaKnown RBP5.75□□□□□ -1.49
SPG11-211ENST00000558561 LOC100289279A0A1B0GTE1 492 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 C9orf172C9J069 976 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 ENC1O14682 589 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 ITGB2P05107 769 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 CTSBP07858 339 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 CELA3AP09093 270 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 MAOBP27338 520 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 PPP2R3AQ06190 1150 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 TAF1CQ15572 869 aaPredicted RBP5.75□□□□□ -1.49
SPG11-211ENST00000558561 LDLRAD1Q5T700 205 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 KIAA1211Q6ZU35 1233 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 AGGF1Q8N302 714 aaeCLIP5.75□□□□□ -1.49
SPG11-211ENST00000558561 CRELD1Q96HD1 420 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 BACH2Q9BYV9 841 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 CEP44Q9C0F1 390 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 MRPL18Q9H0U6 180 aaKnown RBP5.75□□□□□ -1.49
SPG11-211ENST00000558561 WNK3Q9BYP7 1800 aa5.75□□□□□ -1.49
SPG11-211ENST00000558561 SHANK3Q9BYB0 1731 aa5.74□□□□□ -1.49
SPG11-211ENST00000558561 CYP11A1P05108 521 aa5.74□□□□□ -1.49
SPG11-211ENST00000558561 HMOX1P09601 288 aa5.74□□□□□ -1.49
SPG11-211ENST00000558561 RBM25P49756 843 aaKnown RBP5.74□□□□□ -1.49
SPG11-211ENST00000558561 POU4F3Q15319 338 aa5.74□□□□□ -1.49
SPG11-211ENST00000558561 CCDC85BQ15834 202 aaPredicted RBP5.74□□□□□ -1.49
SPG11-211ENST00000558561 ACAD11Q709F0 780 aa5.74□□□□□ -1.49
SPG11-211ENST00000558561 SYTL4Q96C24 671 aaPredicted RBP5.74□□□□□ -1.49
SPG11-211ENST00000558561 MRRFQ96E11 262 aaKnown RBP5.74□□□□□ -1.49
SPG11-211ENST00000558561 NACC1Q96RE7 527 aa5.74□□□□□ -1.49
SPG11-211ENST00000558561 ZC3H12CQ9C0D7 883 aaKnown RBP5.74□□□□□ -1.49
SPG11-211ENST00000558561 LGR6Q9HBX8 967 aa5.74□□□□□ -1.49
SPG11-211ENST00000558561 FLT4P35916 1363 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 F8W735 103 aaPredicted RBP5.73□□□□□ -1.49
SPG11-211ENST00000558561 PLSCR1O15162 318 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 BMP6P22004 513 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 ARNTP27540 789 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 NOS3P29474 1203 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 IREB2P48200 963 aaKnown RBP5.73□□□□□ -1.49
SPG11-211ENST00000558561 AP3B2Q13367 1082 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 MBTPS1Q14703 1052 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 MAP3K11Q16584 847 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 TXNRD1Q16881 649 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 TSNAXIP1Q2TAA8 658 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 PLA2G4EQ3MJ16 856 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 RASIP1Q5U651 963 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 SULT6B1Q6IMI4 303 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 MPRIPQ6WCQ1 1025 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 SV2BQ7L1I2 683 aa5.73□□□□□ -1.49
SPG11-211ENST00000558561 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.73□□□□□ -1.49
SPG11-211ENST00000558561 AMIGO3Q86WK7 504 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms