RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 TMEM74Q96NL1 305 aa6.83□□□□□ -1.32
PDE8A-209ENST00000558543 TRIT1Q9H3H1 467 aaKnown RBP6.83□□□□□ -1.32
PDE8A-209ENST00000558543 GPATCH2Q9NW75 528 aa6.83□□□□□ -1.32
PDE8A-209ENST00000558543 POLR3KQ9Y2Y1 108 aaPredicted RBP6.83□□□□□ -1.32
PDE8A-209ENST00000558543 TLR3O15455 904 aaKnown RBP6.82□□□□□ -1.32
PDE8A-209ENST00000558543 HTR3BO95264 441 aa6.82□□□□□ -1.32
PDE8A-209ENST00000558543 TMEM201Q5SNT2 666 aa6.82□□□□□ -1.32
PDE8A-209ENST00000558543 SNAP47Q5SQN1 464 aa6.82□□□□□ -1.32
PDE8A-209ENST00000558543 GOLM1Q8NBJ4 401 aa6.82□□□□□ -1.32
PDE8A-209ENST00000558543 C8orf37Q96NL8 207 aa6.82□□□□□ -1.32
PDE8A-209ENST00000558543 C19orf44Q9H6X5 657 aa6.82□□□□□ -1.32
PDE8A-209ENST00000558543 DCP1AQ9NPI6 582 aaPredicted RBP6.82□□□□□ -1.32
PDE8A-209ENST00000558543 KCNH3Q9ULD8 1083 aa6.82□□□□□ -1.32
PDE8A-209ENST00000558543 PCDHA11Q9Y5I1 949 aa6.82□□□□□ -1.32
PDE8A-209ENST00000558543 LOC105371045A0A1W2PR82 267 aa6.81□□□□□ -1.32
PDE8A-209ENST00000558543 DNAJA2O60884 412 aa6.81□□□□□ -1.32
PDE8A-209ENST00000558543 TSPAN15O95858 294 aa6.81□□□□□ -1.32
PDE8A-209ENST00000558543 C1QTNF9P0C862 333 aa6.81□□□□□ -1.32
PDE8A-209ENST00000558543 TSPYL5Q86VY4 417 aaPredicted RBP6.81□□□□□ -1.32
PDE8A-209ENST00000558543 CILP2Q8IUL8 1156 aa6.81□□□□□ -1.32
PDE8A-209ENST00000558543 SLFN12Q8IYM2 578 aa6.81□□□□□ -1.32
PDE8A-209ENST00000558543 PPP1R16BQ96T49 567 aa6.81□□□□□ -1.32
PDE8A-209ENST00000558543 GPR62Q9BZJ7 368 aa6.81□□□□□ -1.32
PDE8A-209ENST00000558543 EPB41L4BQ9H329 900 aa6.81□□□□□ -1.32
PDE8A-209ENST00000558543 SHISA3A0PJX4 238 aa6.8□□□□□ -1.32
PDE8A-209ENST00000558543 SRFP11831 508 aa6.8□□□□□ -1.32
PDE8A-209ENST00000558543 CFPP27918 469 aa6.8□□□□□ -1.32
PDE8A-209ENST00000558543 PHACTR4Q8IZ21 702 aa6.8□□□□□ -1.32
PDE8A-209ENST00000558543 FBXO15Q8NCQ5 510 aaPredicted RBP6.8□□□□□ -1.32
PDE8A-209ENST00000558543 BHLHE22Q8NFJ8 381 aaPredicted RBP6.8□□□□□ -1.32
PDE8A-209ENST00000558543 RNF141Q8WVD5 230 aa6.8□□□□□ -1.32
PDE8A-209ENST00000558543 KREMEN1Q96MU8 473 aa6.8□□□□□ -1.32
PDE8A-209ENST00000558543 KIF2CQ99661 725 aa6.8□□□□□ -1.32
PDE8A-209ENST00000558543 RNF32Q9H0A6 362 aa6.8□□□□□ -1.32
PDE8A-209ENST00000558543 COPRSQ9NQ92 184 aa6.8□□□□□ -1.32
PDE8A-209ENST00000558543 NFIBO00712 420 aa6.79□□□□□ -1.32
PDE8A-209ENST00000558543 RECKO95980 971 aa6.79□□□□□ -1.32
PDE8A-209ENST00000558543 HPXP02790 462 aa6.79□□□□□ -1.32
PDE8A-209ENST00000558543 KRT1P04264 644 aa6.79□□□□□ -1.32
PDE8A-209ENST00000558543 ZC3H6P61129 1189 aaKnown RBP6.79□□□□□ -1.32
PDE8A-209ENST00000558543 LCE4AQ5TA78 99 aa6.79□□□□□ -1.32
PDE8A-209ENST00000558543 ANKLE2Q86XL3 938 aa6.79□□□□□ -1.32
PDE8A-209ENST00000558543 LRRC56Q8IYG6 542 aaPredicted RBP6.79□□□□□ -1.32
PDE8A-209ENST00000558543 TOX2Q96NM4 488 aa6.79□□□□□ -1.32
PDE8A-209ENST00000558543 RSRP1Q9BUV0 290 aa6.79□□□□□ -1.32
PDE8A-209ENST00000558543 KBTBD4Q9NVX7 518 aa6.79□□□□□ -1.32
PDE8A-209ENST00000558543 ZGLP1P0C6A0 271 aa6.78□□□□□ -1.32
PDE8A-209ENST00000558543 TIGD5Q53EQ6 642 aa6.78□□□□□ -1.32
PDE8A-209ENST00000558543 FBLN7Q53RD9 439 aa6.78□□□□□ -1.32
PDE8A-209ENST00000558543 REC114Q7Z4M0 266 aa6.78□□□□□ -1.32
PDE8A-209ENST00000558543 CCDC74BQ96LY2 380 aa6.78□□□□□ -1.32
PDE8A-209ENST00000558543 PRR36Q9H6K5 1346 aa6.77□□□□□ -1.32
PDE8A-209ENST00000558543 NPIPB6E9PJ23 425 aa6.77□□□□□ -1.33
PDE8A-209ENST00000558543 SCAMP3O14828 347 aaKnown RBP6.77□□□□□ -1.33
PDE8A-209ENST00000558543 GARTP22102 1010 aa6.77□□□□□ -1.33
PDE8A-209ENST00000558543 GBP1P32455 592 aa6.77□□□□□ -1.33
PDE8A-209ENST00000558543 CHMP4BP1P59074 171 aa6.77□□□□□ -1.33
PDE8A-209ENST00000558543 PWP1Q13610 501 aa6.77□□□□□ -1.33
PDE8A-209ENST00000558543 MPP2Q14168 576 aa6.77□□□□□ -1.33
PDE8A-209ENST00000558543 CLEC16AQ2KHT3 1053 aa6.77□□□□□ -1.33
PDE8A-209ENST00000558543 SP110Q9HB58 689 aa6.77□□□□□ -1.33
PDE8A-209ENST00000558543 TMEM253P0C7T8 217 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 GALK1P51570 392 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 MRPL58Q14197 206 aaKnown RBP6.76□□□□□ -1.33
PDE8A-209ENST00000558543 ARSHQ5FYA8 562 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 FBXL19Q6PCT2 694 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 ATG14Q6ZNE5 492 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 FAM196AQ6ZSG2 479 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 LCNL1Q6ZST4 164 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 C1QL4Q86Z23 238 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 PDZD8Q8NEN9 1154 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 SREK1Q8WXA9 508 aaKnown RBP6.76□□□□□ -1.33
PDE8A-209ENST00000558543 DRC1Q96MC2 740 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 ASPNQ9BXN1 380 aa6.76□□□□□ -1.33
PDE8A-209ENST00000558543 SF3A1Q15459 793 aaKnown RBP6.75□□□□□ -1.33
PDE8A-209ENST00000558543 OXR1Q8N573 874 aa6.75□□□□□ -1.33
PDE8A-209ENST00000558543 ZSCAN18Q8TBC5 510 aaPredicted RBP6.75□□□□□ -1.33
PDE8A-209ENST00000558543 SYTL4Q96C24 671 aaPredicted RBP6.75□□□□□ -1.33
PDE8A-209ENST00000558543 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
PDE8A-209ENST00000558543 BACH2Q9BYV9 841 aa6.75□□□□□ -1.33
PDE8A-209ENST00000558543 BRMS1Q9HCU9 246 aa6.75□□□□□ -1.33
PDE8A-209ENST00000558543 EBF1Q9UH73 591 aa6.75□□□□□ -1.33
PDE8A-209ENST00000558543 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
PDE8A-209ENST00000558543 ZSCAN22P10073 491 aaPredicted RBP6.74□□□□□ -1.33
PDE8A-209ENST00000558543 POLR2BP30876 1174 aaKnown RBP6.74□□□□□ -1.33
PDE8A-209ENST00000558543 TEKQ02763 1124 aa6.74□□□□□ -1.33
PDE8A-209ENST00000558543 CWF19L2Q2TBE0 894 aaKnown RBP6.74□□□□□ -1.33
PDE8A-209ENST00000558543 ERMP1Q7Z2K6 904 aa6.74□□□□□ -1.33
PDE8A-209ENST00000558543 DHX38Q92620 1227 aaKnown RBP6.74□□□□□ -1.33
PDE8A-209ENST00000558543 PCDHB14Q9Y5E9 798 aa6.74□□□□□ -1.33
PDE8A-209ENST00000558543 FITM1A5D6W6 292 aa6.73□□□□□ -1.33
PDE8A-209ENST00000558543 TCAF2A6NFQ2 919 aa6.73□□□□□ -1.33
PDE8A-209ENST00000558543 SLC22A31A6NKX4 558 aa6.73□□□□□ -1.33
PDE8A-209ENST00000558543 UBOX5O94941 541 aa6.73□□□□□ -1.33
PDE8A-209ENST00000558543 RAG1P15918 1043 aa6.73□□□□□ -1.33
PDE8A-209ENST00000558543 ERCC5P28715 1186 aaPredicted RBP6.73□□□□□ -1.33
PDE8A-209ENST00000558543 CRKP46108 304 aa6.73□□□□□ -1.33
PDE8A-209ENST00000558543 NMIQ13287 307 aaPredicted RBP6.73□□□□□ -1.33
PDE8A-209ENST00000558543 ZNF605Q86T29 641 aa6.73□□□□□ -1.33
PDE8A-209ENST00000558543 KCNN1Q92952 543 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms