RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 SIAH1Q8IUQ4 282 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 NUP133Q8WUM0 1156 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 WDR18Q9BV38 432 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 AS3MTQ9HBK9 375 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 SMC3Q9UQE7 1217 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 TMX2Q9Y320 296 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 KIF3AQ9Y496 699 aa17.34■□□□□ 0.37
VPS18-202ENST00000558474 POTEIP0CG38 1075 aa17.33■□□□□ 0.36
VPS18-202ENST00000558474 POTEJP0CG39 1038 aa17.33■□□□□ 0.36
VPS18-202ENST00000558474 IFNAR1P17181 557 aa17.33■□□□□ 0.36
VPS18-202ENST00000558474 INPP5BP32019 993 aa17.33■□□□□ 0.36
VPS18-202ENST00000558474 ASPRV1Q53RT3 343 aa17.33■□□□□ 0.36
VPS18-202ENST00000558474 GPATCH4Q5T3I0 446 aaKnown RBP17.33■□□□□ 0.36
VPS18-202ENST00000558474 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.36
VPS18-202ENST00000558474 CHADLQ6NUI6 762 aa17.33■□□□□ 0.36
VPS18-202ENST00000558474 ARMC9Q7Z3E5 817 aa17.33■□□□□ 0.36
VPS18-202ENST00000558474 NSUN7Q8NE18 718 aaKnown RBP17.33■□□□□ 0.36
VPS18-202ENST00000558474 DCAF4Q8WV16 495 aa17.33■□□□□ 0.36
VPS18-202ENST00000558474 PICK1Q9NRD5 415 aa17.33■□□□□ 0.36
VPS18-202ENST00000558474 FAM217BQ9NTX9 383 aaPredicted RBP17.33■□□□□ 0.36
VPS18-202ENST00000558474 CIZ1Q9ULV3 898 aaPredicted RBP17.33■□□□□ 0.36
VPS18-202ENST00000558474 STK36Q9NRP7 1315 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 OTOFQ9HC10 1997 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 PALM3A6NDB9 673 aaPredicted RBP17.32■□□□□ 0.36
VPS18-202ENST00000558474 PARP1P09874 1014 aaKnown RBP17.32■□□□□ 0.36
VPS18-202ENST00000558474 CDC27P30260 824 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 ADD1P35611 737 aaKnown RBP17.32■□□□□ 0.36
VPS18-202ENST00000558474 NTRK3Q16288 839 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 ANKRD13AQ8IZ07 590 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 GMCL1Q96IK5 515 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 MYL10Q9BUA6 226 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 GPBP1L1Q9HC44 474 aaPredicted RBP17.32■□□□□ 0.36
VPS18-202ENST00000558474 NCOA5Q9HCD5 579 aaKnown RBP17.32■□□□□ 0.36
VPS18-202ENST00000558474 GOPCQ9HD26 462 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
VPS18-202ENST00000558474 CSADQ9Y600 493 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 PHIPQ8WWQ0 1821 aa17.32■□□□□ 0.36
VPS18-202ENST00000558474 PDHBP11177 359 aa17.31■□□□□ 0.36
VPS18-202ENST00000558474 PTPRAP18433 802 aa17.31■□□□□ 0.36
VPS18-202ENST00000558474 PDCP20941 246 aa17.31■□□□□ 0.36
VPS18-202ENST00000558474 DDIT3P35638 169 aa17.31■□□□□ 0.36
VPS18-202ENST00000558474 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
VPS18-202ENST00000558474 SHROOM1Q2M3G4 852 aaPredicted RBP17.31■□□□□ 0.36
VPS18-202ENST00000558474 TMTC3Q6ZXV5 915 aa17.31■□□□□ 0.36
VPS18-202ENST00000558474 MAD2L2Q9UI95 211 aa17.31■□□□□ 0.36
VPS18-202ENST00000558474 TRPM7Q96QT4 1865 aa17.31■□□□□ 0.36
VPS18-202ENST00000558474 F5H6K3 240 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 CTDNEP1O95476 244 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 RXRAP19793 462 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 GJB2P29033 226 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 USP14P54578 494 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 KLRC3Q07444 240 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
VPS18-202ENST00000558474 CLEC10AQ8IUN9 316 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 TRIM22Q8IYM9 498 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 LRRC47Q8N1G4 583 aaKnown RBP17.3■□□□□ 0.36
VPS18-202ENST00000558474 ZNF526Q8TF50 670 aaPredicted RBP17.3■□□□□ 0.36
VPS18-202ENST00000558474 LPAR1Q92633 364 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 RNF26Q9BY78 433 aaPredicted RBP17.3■□□□□ 0.36
VPS18-202ENST00000558474 KIAA1683Q9H0B3 1180 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 VCPKMTQ9H867 229 aa17.3■□□□□ 0.36
VPS18-202ENST00000558474 A0A1W2PRG0 241 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 PTPDC1A2A3K4 754 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 C19orf81C9J6K1 198 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 FMNL1O95466 1100 aaPredicted RBP17.29■□□□□ 0.36
VPS18-202ENST00000558474 SSRP1Q08945 709 aaKnown RBP17.29■□□□□ 0.36
VPS18-202ENST00000558474 ZNF543Q08ER8 600 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 LDLRAD1Q5T700 205 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 SLFN13Q68D06 897 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 ZNF280CQ8ND82 737 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 WASF1Q92558 559 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 ZKSCAN4Q969J2 545 aaPredicted RBP17.29■□□□□ 0.36
VPS18-202ENST00000558474 SPZ1Q9BXG8 430 aa17.29■□□□□ 0.36
VPS18-202ENST00000558474 MYH6P13533 1939 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 USP17L10C9JJH3 530 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 PRPF3O43395 683 aaKnown RBP17.28■□□□□ 0.36
VPS18-202ENST00000558474 PLA2G6O60733 806 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 ITGBL1O95965 494 aaPredicted RBP17.28■□□□□ 0.36
VPS18-202ENST00000558474 SLC1A4P43007 532 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 PPATQ06203 517 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 FUT2Q10981 343 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 VGLL4Q14135 290 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 NBPF11Q86T75 865 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 FAM184AQ8NB25 1140 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 RBM46Q8TBY0 533 aaKnown RBP17.28■□□□□ 0.36
VPS18-202ENST00000558474 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
VPS18-202ENST00000558474 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 DEXIO95424 95 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 NDUFB10O96000 172 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 ECE1P42892 770 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 NUCB2P80303 420 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 AKAP17AQ02040 695 aaKnown RBP17.27■□□□□ 0.36
VPS18-202ENST00000558474 TTLL12Q14166 644 aaPredicted RBP17.27■□□□□ 0.36
VPS18-202ENST00000558474 DLK2Q6UY11 383 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 ERO1BQ86YB8 467 aa17.27■□□□□ 0.36
VPS18-202ENST00000558474 FAM177A1Q8N128 213 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms