RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PLXNB2O15031 1838 aa14.27□□□□□ -0.12
HERC1-202ENST00000558324 RAD21O60216 631 aa14.27□□□□□ -0.13
HERC1-202ENST00000558324 FARP2O94887 1054 aaPredicted RBP14.27□□□□□ -0.13
HERC1-202ENST00000558324 SGPL1O95470 568 aa14.27□□□□□ -0.13
HERC1-202ENST00000558324 TFRCP02786 760 aaKnown RBP14.27□□□□□ -0.13
HERC1-202ENST00000558324 EEF2P13639 858 aaKnown RBP14.27□□□□□ -0.13
HERC1-202ENST00000558324 CCNA1P78396 465 aa14.27□□□□□ -0.13
HERC1-202ENST00000558324 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.13
HERC1-202ENST00000558324 PLEKHH3Q7Z736 793 aa14.27□□□□□ -0.13
HERC1-202ENST00000558324 SIAH1Q8IUQ4 282 aa14.27□□□□□ -0.13
HERC1-202ENST00000558324 GCC1Q96CN9 775 aa14.27□□□□□ -0.13
HERC1-202ENST00000558324 SH2D4AQ9H788 454 aa14.27□□□□□ -0.13
HERC1-202ENST00000558324 TMX2Q9Y320 296 aa14.27□□□□□ -0.13
HERC1-202ENST00000558324 SALL3Q9BXA9 1300 aa14.26□□□□□ -0.13
HERC1-202ENST00000558324 FLOT1O75955 427 aa14.26□□□□□ -0.13
HERC1-202ENST00000558324 ZKSCAN1P17029 563 aaPredicted RBP14.26□□□□□ -0.13
HERC1-202ENST00000558324 GNAT2P19087 354 aa14.26□□□□□ -0.13
HERC1-202ENST00000558324 COG2Q14746 738 aa14.26□□□□□ -0.13
HERC1-202ENST00000558324 SBK1Q52WX2 424 aa14.26□□□□□ -0.13
HERC1-202ENST00000558324 GIMAP6Q6P9H5 292 aa14.26□□□□□ -0.13
HERC1-202ENST00000558324 LPAR1Q92633 364 aa14.26□□□□□ -0.13
HERC1-202ENST00000558324 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
HERC1-202ENST00000558324 MKNK2Q9HBH9 465 aa14.26□□□□□ -0.13
HERC1-202ENST00000558324 PAK6Q9NQU5 681 aaPredicted RBP14.26□□□□□ -0.13
HERC1-202ENST00000558324 DOCK3Q8IZD9 2030 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 ROBO3Q96MS0 1386 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 PRDM1O75626 825 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
HERC1-202ENST00000558324 RASA1P20936 1047 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 RGS2P41220 211 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 PLS1Q14651 629 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 CCL14Q16627 93 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 MORN1Q5T089 497 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 LBX2Q6XYB7 198 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 CCDC129Q6ZRS4 1044 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 DPF3Q92784 378 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 ATG4CQ96DT6 458 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 APBA2Q99767 749 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 LNPKQ9C0E8 428 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 KANSL2Q9H9L4 492 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 HMX1Q9NP08 348 aaPredicted RBP14.25□□□□□ -0.13
HERC1-202ENST00000558324 IVNS1ABPQ9Y6Y0 642 aa14.25□□□□□ -0.13
HERC1-202ENST00000558324 RPTORQ8N122 1335 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 PATL2C9JE40 543 aaKnown RBP14.24□□□□□ -0.13
HERC1-202ENST00000558324 XRCC5P13010 732 aaKnown RBP14.24□□□□□ -0.13
HERC1-202ENST00000558324 PDE1AP54750 535 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 MAP2K5Q13163 448 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 UBE2Q1Q7Z7E8 422 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 IFNL3Q8IZI9 196 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 EXOC6Q8TAG9 804 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 USP6NLQ92738 828 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
HERC1-202ENST00000558324 NACAP1Q9BZK3 213 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 NAPBQ9H115 298 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 HOXC10Q9NYD6 342 aa14.24□□□□□ -0.13
HERC1-202ENST00000558324 H0YGN5 161 aa14.23□□□□□ -0.13
HERC1-202ENST00000558324 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
HERC1-202ENST00000558324 PTPREP23469 700 aa14.23□□□□□ -0.13
HERC1-202ENST00000558324 DSG3P32926 999 aa14.23□□□□□ -0.13
HERC1-202ENST00000558324 DIS3LQ8TF46 1054 aaKnown RBP14.23□□□□□ -0.13
HERC1-202ENST00000558324 MOV10L1Q9BXT6 1211 aaKnown RBP14.23□□□□□ -0.13
HERC1-202ENST00000558324 SPATC1LQ9H0A9 340 aa14.23□□□□□ -0.13
HERC1-202ENST00000558324 GOPCQ9HD26 462 aa14.23□□□□□ -0.13
HERC1-202ENST00000558324 FBXO28Q9NVF7 368 aa14.23□□□□□ -0.13
HERC1-202ENST00000558324 A0A0G2JMZ2 1700 aa14.23□□□□□ -0.13
HERC1-202ENST00000558324 SLC15A5A6NIM6 579 aa14.22□□□□□ -0.13
HERC1-202ENST00000558324 CACNB2Q08289 660 aaPredicted RBP14.22□□□□□ -0.13
HERC1-202ENST00000558324 FAM83BQ5T0W9 1011 aa14.22□□□□□ -0.13
HERC1-202ENST00000558324 TRMT44Q8IYL2 757 aaKnown RBP14.22□□□□□ -0.13
HERC1-202ENST00000558324 EVI5LQ96CN4 794 aa14.22□□□□□ -0.13
HERC1-202ENST00000558324 NUP88Q99567 741 aaPredicted RBP14.22□□□□□ -0.13
HERC1-202ENST00000558324 HTATIP2Q9BUP3 242 aa14.22□□□□□ -0.13
HERC1-202ENST00000558324 CRISPLD2Q9H0B8 497 aa14.22□□□□□ -0.13
HERC1-202ENST00000558324 RWDD1Q9H446 243 aaPredicted RBP14.22□□□□□ -0.13
HERC1-202ENST00000558324 STAP2Q9UGK3 403 aa14.22□□□□□ -0.13
HERC1-202ENST00000558324 ERCC3P19447 782 aa14.21□□□□□ -0.13
HERC1-202ENST00000558324 CCND3P30281 292 aaPredicted RBP14.21□□□□□ -0.13
HERC1-202ENST00000558324 AAMPQ13685 434 aa14.21□□□□□ -0.13
HERC1-202ENST00000558324 GRB14Q14449 540 aa14.21□□□□□ -0.13
HERC1-202ENST00000558324 MAP3K21Q5TCX8 1036 aa14.21□□□□□ -0.13
HERC1-202ENST00000558324 NCAPG2Q86XI2 1143 aa14.21□□□□□ -0.13
HERC1-202ENST00000558324 ZNF444Q8N0Y2 327 aaPredicted RBP14.21□□□□□ -0.13
HERC1-202ENST00000558324 MB21D1Q8N884 522 aa14.21□□□□□ -0.13
HERC1-202ENST00000558324 PAWRQ96IZ0 340 aaKnown RBP14.21□□□□□ -0.13
HERC1-202ENST00000558324 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
HERC1-202ENST00000558324 FLRT1Q9NZU1 646 aa14.21□□□□□ -0.13
HERC1-202ENST00000558324 GREB1LQ9C091 1923 aaPredicted RBP14.21□□□□□ -0.14
HERC1-202ENST00000558324 RLFQ13129 1914 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 TRIM6-TRIM34B2RNG4 842 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 IGHDP01880 384 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 SLC3A2P08195 630 aaKnown RBP14.2□□□□□ -0.14
HERC1-202ENST00000558324 ADORA2AP29274 412 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 PPARAQ07869 468 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 FAM47AQ5JRC9 791 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 VPS53Q5VIR6 699 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 DPP9Q86TI2 863 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 SMC5Q8IY18 1101 aa14.2□□□□□ -0.14
HERC1-202ENST00000558324 LRRC47Q8N1G4 583 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms