RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 RAPGEF3O95398 923 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 PDGFRBP09619 1106 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 VARSP26640 1264 aaKnown RBP12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 MAP3K12Q12852 859 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 THOC7Q6I9Y2 204 aaKnown RBP12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 KANK3Q6NY19 840 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 ZNHIT6Q9NWK9 470 aaKnown RBP12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 FBXO9Q9UK97 447 aaPredicted RBP12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 ZC3H13Q5T200 1668 aaKnown RBP12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 P4HA2O15460 535 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 EVI5O60447 810 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 KARSQ15046 597 aaKnown RBP12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 C9orf84Q5VXU9 1444 aa12.29□□□□□ -0.44
SEMA4B-204ENST00000558065 VPS37CA5D8V6 355 aaPredicted RBP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 LDHAP00338 332 aaKnown RBP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 BYSLQ13895 437 aaKnown RBP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 RCN1Q15293 331 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 EMC10Q5UCC4 262 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 TMEM53Q6P2H8 277 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 RNF25Q96BH1 459 aaPredicted RBP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 ARL8AQ96BM9 186 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 SLC7A5P2Q9GIP4 190 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 GOLPH3LQ9H4A5 285 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 PANK4Q9NVE7 773 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 ABCC3O15438 1527 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 CTAGE15A4D2H0 777 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 CTAGE8P0CG41 777 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 GUCY1A3Q02108 690 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 KRT72Q14CN4 511 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 MSL1Q68DK7 614 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 CTAGE6Q86UF2 777 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 CTAGE4Q8IX94 777 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 NSUN7Q8NE18 718 aaKnown RBP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 LZICQ8WZA0 190 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 CYFIP2Q96F07 1278 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 NAF1Q96HR8 494 aaKnown RBP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 SPATA32Q96LK8 384 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 RNPC3Q96LT9 517 aaKnown RBP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 SCAND2PQ9GZW5 306 aaPredicted RBP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 TRIM43BA6NCK2 446 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 SUPT3HO75486 399 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 PPP1R37O75864 691 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 HOXD10P28358 340 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 MRPS35P82673 323 aaKnown RBP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 SEPT14Q6ZU15 432 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 DDX21Q9NR30 783 aaKnown RBP eCLIP12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 SSH2Q76I76 1423 aa12.28□□□□□ -0.44
SEMA4B-204ENST00000558065 TMEM232C9JQI7 657 aa12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 PPIP5K2O43314 1243 aa12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 SP100P23497 879 aaPredicted RBP12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 TUBB2AQ13885 445 aa12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 NBPF14Q5TI25 921 aa12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 DUS1LQ6P1R4 473 aaKnown RBP12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 PEX5LQ8IYB4 626 aa12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 GSPT2Q8IYD1 628 aaKnown RBP12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 AZIN2Q96A70 460 aa12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 CDC5LQ99459 802 aaKnown RBP12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 TUBB2BQ9BVA1 445 aa12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 PUS3Q9BZE2 481 aaKnown RBP12.27□□□□□ -0.44
SEMA4B-204ENST00000558065 ATP1A2P50993 1020 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 USP14P54578 494 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 AK2P54819 239 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 CYP4A11Q02928 519 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 OR52E8Q6IFG1 317 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 AGBL1Q96MI9 1066 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 MYH15Q9Y2K3 1946 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 PLA2R1Q13018 1463 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 AKR1B10O60218 316 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 ST3GAL1Q11201 340 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 KDM7AQ6ZMT4 941 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 PPP2R3CQ969Q6 453 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 TRAPPC9Q96Q05 1148 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 POLD4Q9HCU8 107 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 HESX1Q9UBX0 185 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 DDX25Q9UHL0 483 aaKnown RBP12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 SH3GLB1Q9Y371 365 aa12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 CTDP1Q9Y5B0 961 aaPredicted RBP12.27□□□□□ -0.45
SEMA4B-204ENST00000558065 TRIM21P19474 475 aaKnown RBP12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 MLH1P40692 756 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 SLC7A5P1Q8MH63 180 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 CCT6BQ92526 530 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 CIDEBQ9UHD4 219 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 PFDN1O60925 122 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 FERMT3Q86UX7 667 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 DYTNA2CJ06 578 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 ZNF268Q14587 947 aaPredicted RBP12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 NCAPHQ15003 741 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 TAF7Q15545 349 aaPredicted RBP12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 MAEAQ7L5Y9 396 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 DEPTORQ8TB45 409 aa12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 NR1H4Q96RI1 486 aaPredicted RBP12.26□□□□□ -0.45
SEMA4B-204ENST00000558065 KIAA1522Q9P206 1035 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms