RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 CEP350Q5VT06 3117 aa7.46□□□□□ -1.22
HNRNPC-233ENST00000557768 KIAA1551Q9HCM1 1747 aa7.46□□□□□ -1.22
HNRNPC-233ENST00000557768 CGNL1Q0VF96 1302 aa7.46□□□□□ -1.22
HNRNPC-233ENST00000557768 NOS3P29474 1203 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 CD68P34810 354 aaPredicted RBP7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 MAPK8P45983 427 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 PLCB3Q01970 1234 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 SLC7A3Q8WY07 619 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 ALKBH8Q96BT7 664 aaKnown RBP7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 DMRTB1Q96MA1 342 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 MRPL18Q9H0U6 180 aaKnown RBP7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 SEMA6BQ9H3T3 888 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 CD2APQ9Y5K6 639 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 PCDH11XQ9BZA7 1347 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 PCDH11YQ9BZA8 1340 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 VIRMAQ69YN4 1812 aaKnown RBP7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 INSRP06213 1382 aa7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 BRCA1P38398 1863 aaKnown RBP7.45□□□□□ -1.22
HNRNPC-233ENST00000557768 COL5A3P25940 1745 aaPredicted RBP7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 H3BRJ5 948 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 CYP27B1O15528 508 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 TREHO43280 583 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 NEFLP07196 543 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 ERCC5P28715 1186 aaPredicted RBP7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 NAALADL2Q58DX5 795 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 GALNT12Q8IXK2 581 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 TP53INP1Q96A56 240 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 AKTIPQ9H8T0 292 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 SEC31BQ9NQW1 1179 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 KCNK4Q9NYG8 393 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 FLT4P35916 1363 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 C4AP0C0L4 1744 aa7.44□□□□□ -1.22
HNRNPC-233ENST00000557768 EIF1AYO14602 144 aaKnown RBP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 SCAMP3O14828 347 aaKnown RBP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 DDX3YO15523 660 aaKnown RBP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 CPNE3O75131 537 aaKnown RBP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 LDHBP07195 334 aaKnown RBP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 FGD1P98174 961 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 FMR1Q06787 632 aaKnown RBP eCLIP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 MRPL58Q14197 206 aaKnown RBP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 RSPO4Q2I0M5 234 aaPredicted RBP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 FOXD4L6Q3SYB3 417 aaPredicted RBP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 C9orf131Q5VYM1 1079 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 FOXD4L3Q6VB84 417 aaPredicted RBP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 AGGF1Q8N302 714 aaeCLIP7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 FLAD1Q8NFF5 587 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 BSNDQ8WZ55 320 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 PIGBQ92521 554 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 KLHDC7BQ96G42 594 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 MRS2Q9HD23 443 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 NPHS2Q9NP85 383 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 SOX13Q9UN79 622 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 IGSF1Q8N6C5 1336 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 ADCY9O60503 1353 aa7.43□□□□□ -1.22
HNRNPC-233ENST00000557768 MYH14Q7Z406 1995 aaKnown RBP7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 A0A1W2PP55 124 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 METTL12A8MUP2 240 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 F8W735 103 aaPredicted RBP7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 PPM1GO15355 546 aaPredicted RBP7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 WISP1O95388 367 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 HMGB1P09429 215 aaKnown RBP7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 TMF1P82094 1093 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 DSC3Q14574 896 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 HGSNATQ68CP4 663 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 ACAD11Q709F0 780 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 KLHL23Q8NBE8 558 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 LINC00116Q8NCU8 138 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 SMARCC1Q92922 1105 aaPredicted RBP7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 MEGF10Q96KG7 1140 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 CSRNP1Q96S65 589 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 PARP2Q9UGN5 583 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 ARFGEF1Q9Y6D6 1849 aa7.42□□□□□ -1.22
HNRNPC-233ENST00000557768 CICQ96RK0 1608 aaPredicted RBP7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 ZNF831Q5JPB2 1677 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 GLB1P16278 677 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 NLRP12P59046 1061 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 HDLBPQ00341 1268 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 IKBKEQ14164 716 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 DUOXA2Q1HG44 320 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 NKAPLQ5M9Q1 402 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 TMEM130Q8N3G9 435 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 TMEM87AQ8NBN3 555 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 FAM161BQ96MY7 647 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 DUSP9Q99956 384 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 BHLHE41Q9C0J9 482 aaPredicted RBP7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 LIN7BQ9HAP6 207 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 KIF24Q5T7B8 1368 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 NCAPD2Q15021 1401 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 NSD3Q9BZ95 1437 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 SBF1O95248 1867 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 CCDC88AQ3V6T2 1871 aa7.41□□□□□ -1.22
HNRNPC-233ENST00000557768 ADAM11O75078 769 aa7.4□□□□□ -1.22
HNRNPC-233ENST00000557768 PRPF40AO75400 957 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-233ENST00000557768 HSPA6P17066 643 aa7.4□□□□□ -1.22
HNRNPC-233ENST00000557768 ARL4DP49703 201 aa7.4□□□□□ -1.22
HNRNPC-233ENST00000557768 ATP2B2Q01814 1243 aa7.4□□□□□ -1.22
HNRNPC-233ENST00000557768 ITPK1Q13572 414 aa7.4□□□□□ -1.22
HNRNPC-233ENST00000557768 SF3A1Q15459 793 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-233ENST00000557768 VN1R5Q7Z5H4 357 aa7.4□□□□□ -1.22
HNRNPC-233ENST00000557768 UBASH3BQ8TF42 649 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms