RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 GMCL1P1Q8NEA9 526 aa16.14■□□□□ 0.17
SHMT2-234ENST00000557703 CEP95Q96GE4 821 aa16.14■□□□□ 0.17
SHMT2-234ENST00000557703 PRDM10Q9NQV6 1147 aa16.14■□□□□ 0.17
SHMT2-234ENST00000557703 HOXC10Q9NYD6 342 aa16.14■□□□□ 0.17
SHMT2-234ENST00000557703 A0A1W2PRG0 241 aa16.13■□□□□ 0.17
SHMT2-234ENST00000557703 WDR46O15213 610 aaKnown RBP16.13■□□□□ 0.17
SHMT2-234ENST00000557703 HMGB1P09429 215 aaKnown RBP16.13■□□□□ 0.17
SHMT2-234ENST00000557703 FAM47AQ5JRC9 791 aa16.13■□□□□ 0.17
SHMT2-234ENST00000557703 LBX2Q6XYB7 198 aa16.13■□□□□ 0.17
SHMT2-234ENST00000557703 STK11IPQ8N1F8 1099 aa16.13■□□□□ 0.17
SHMT2-234ENST00000557703 ACER1Q8TDN7 264 aa16.13■□□□□ 0.17
SHMT2-234ENST00000557703 ANKS1AQ92625 1134 aa16.13■□□□□ 0.17
SHMT2-234ENST00000557703 CLIP2Q9UDT6 1046 aa16.13■□□□□ 0.17
SHMT2-234ENST00000557703 GTF3C3Q9Y5Q9 886 aa16.13■□□□□ 0.17
SHMT2-234ENST00000557703 MYPNQ86TC9 1320 aa16.13■□□□□ 0.17
SHMT2-234ENST00000557703 E7EWF7 191 aa16.12■□□□□ 0.17
SHMT2-234ENST00000557703 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
SHMT2-234ENST00000557703 IRX3P78415 501 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-234ENST00000557703 SHROOM1Q2M3G4 852 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-234ENST00000557703 RRP12Q5JTH9 1297 aaKnown RBP16.12■□□□□ 0.17
SHMT2-234ENST00000557703 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
SHMT2-234ENST00000557703 CATSPERGQ6ZRH7 1159 aa16.12■□□□□ 0.17
SHMT2-234ENST00000557703 CCDC84Q86UT8 332 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-234ENST00000557703 TMTC2Q8N394 836 aa16.12■□□□□ 0.17
SHMT2-234ENST00000557703 KCNB2Q92953 911 aa16.12■□□□□ 0.17
SHMT2-234ENST00000557703 UBAC1Q9BSL1 405 aa16.12■□□□□ 0.17
SHMT2-234ENST00000557703 IL17RBQ9NRM6 502 aa16.12■□□□□ 0.17
SHMT2-234ENST00000557703 ZSWIM5Q9P217 1185 aa16.12■□□□□ 0.17
SHMT2-234ENST00000557703 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-234ENST00000557703 LOC285556D6RIA3 1793 aa16.12■□□□□ 0.17
SHMT2-234ENST00000557703 SLC27A2O14975 620 aa16.11■□□□□ 0.17
SHMT2-234ENST00000557703 KDM4AO75164 1064 aa16.11■□□□□ 0.17
SHMT2-234ENST00000557703 FDX1P10109 184 aa16.11■□□□□ 0.17
SHMT2-234ENST00000557703 VCAM1P19320 739 aa16.11■□□□□ 0.17
SHMT2-234ENST00000557703 MCCP23508 829 aa16.11■□□□□ 0.17
SHMT2-234ENST00000557703 CRHR2Q13324 411 aa16.11■□□□□ 0.17
SHMT2-234ENST00000557703 MB21D1Q8N884 522 aa16.11■□□□□ 0.17
SHMT2-234ENST00000557703 STX8Q9UNK0 236 aa16.11■□□□□ 0.17
SHMT2-234ENST00000557703 TACC3Q9Y6A5 838 aa16.11■□□□□ 0.17
SHMT2-234ENST00000557703 ERICH2A1L162 156 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 F5H6K3 240 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 GPR25O00155 361 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 FOXN1O15353 648 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 PLA2G6O60733 806 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 GNRH1P01148 92 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 MCM5P33992 734 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 HSPA4P34932 840 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 ATP2B2Q01814 1243 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 KLRC3Q07444 240 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 COG2Q14746 738 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-234ENST00000557703 GMCL1Q96IK5 515 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 ZSCAN10Q96SZ4 725 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-234ENST00000557703 ASCC2Q9H1I8 757 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-234ENST00000557703 INCENPQ9NQS7 918 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 NEDD4P46934 1319 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
SHMT2-234ENST00000557703 B4E1Z4 1266 aa16.09■□□□□ 0.17
SHMT2-234ENST00000557703 FKTNO75072 461 aa16.09■□□□□ 0.17
SHMT2-234ENST00000557703 HSPA8P11142 646 aaKnown RBP16.09■□□□□ 0.17
SHMT2-234ENST00000557703 TREML2Q5T2D2 321 aa16.09■□□□□ 0.17
SHMT2-234ENST00000557703 C17orf99Q6UX52 265 aa16.09■□□□□ 0.17
SHMT2-234ENST00000557703 TMEM87BQ96K49 555 aa16.09■□□□□ 0.17
SHMT2-234ENST00000557703 USP26Q9BXU7 913 aa16.09■□□□□ 0.17
SHMT2-234ENST00000557703 TBC1D8O95759 1140 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 PSMA5P28066 241 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 SP3Q02447 781 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 KIF22Q14807 665 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 FAM110CQ1W6H9 321 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 CHURC1Q8WUH1 139 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 DCAF4Q8WV16 495 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 ERO1AQ96HE7 468 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.16
SHMT2-234ENST00000557703 FEM1BQ9UK73 627 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 RABGAP1Q9Y3P9 1069 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 ADGRA2Q96PE1 1338 aa16.08■□□□□ 0.16
SHMT2-234ENST00000557703 MYH4Q9Y623 1939 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 NDUFB10O96000 172 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 SLC1A4P43007 532 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 ANAPC15P60006 121 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 HERVK_113P62684 666 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 ZYXQ15942 572 aaKnown RBP16.07■□□□□ 0.16
SHMT2-234ENST00000557703 GPATCH4Q5T3I0 446 aaKnown RBP16.07■□□□□ 0.16
SHMT2-234ENST00000557703 FAM160B2Q86V87 743 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 PRPF38AQ8NAV1 312 aaKnown RBP16.07■□□□□ 0.16
SHMT2-234ENST00000557703 IL27Q8NEV9 243 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 NEK1Q96PY6 1258 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 KAT14Q9H8E8 782 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 MORF4L1Q9UBU8 362 aa16.07■□□□□ 0.16
SHMT2-234ENST00000557703 TNKSO95271 1327 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 BCRP11274 1271 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 BMP3P12645 472 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 LIFRP42702 1097 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 CCNA1P78396 465 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 PKN2Q16513 984 aaKnown RBP16.06■□□□□ 0.16
SHMT2-234ENST00000557703 IFIT1BQ5T764 474 aaKnown RBP16.06■□□□□ 0.16
SHMT2-234ENST00000557703 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 CLEC10AQ8IUN9 316 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms