RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 RIN3Q8TB24 985 aa6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 KLHL6Q8WZ60 621 aa6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 SMARCC1Q92922 1105 aaPredicted RBP6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 ZNF669Q96BR6 464 aaPredicted RBP6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 MIPEPQ99797 713 aa6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 COL17A1Q9UMD9 1497 aaPredicted RBP6.5□□□□□ -1.37
EFCAB11-213ENST00000557685 ETV3P41162 512 aa6.5□□□□□ -1.37
EFCAB11-213ENST00000557685 IFRD2Q12894 506 aaPredicted RBP6.5□□□□□ -1.37
EFCAB11-213ENST00000557685 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
EFCAB11-213ENST00000557685 ST13P5Q8NFI4 369 aaPredicted RBP6.5□□□□□ -1.37
EFCAB11-213ENST00000557685 VWCEQ96DN2 955 aa6.5□□□□□ -1.37
EFCAB11-213ENST00000557685 DNAJC7Q99615 494 aa6.5□□□□□ -1.37
EFCAB11-213ENST00000557685 TBX22Q9Y458 520 aa6.5□□□□□ -1.37
EFCAB11-213ENST00000557685 B2RBV5 119 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 CYP7A1P22680 504 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 ZNF143P52747 638 aaPredicted RBP6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 CDK5R2Q13319 367 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 ANKRD39Q53RE8 183 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 NBPF12Q5TAG4 269 aaPredicted RBP6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 MRM1Q6IN84 353 aaKnown RBP6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 FBXL18Q96ME1 805 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 KREMEN1Q96MU8 473 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 KRTAP4-12Q9BQ66 201 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 DUSP23Q9BVJ7 150 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 EPN3Q9H201 632 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 STOML1Q9UBI4 398 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 RAXQ9Y2V3 346 aa6.49□□□□□ -1.37
EFCAB11-213ENST00000557685 C9IYK1 514 aa6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 EOMESO95936 686 aa6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 TP53P04637 393 aaPredicted RBP6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 RNF4P78317 190 aa6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 MTERF2Q49AM1 385 aa6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 OGFOD3Q6PK18 319 aa6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 PPFIBP1Q86W92 1011 aa6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 FAM177A1Q8N128 213 aaPredicted RBP6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 RNF141Q8WVD5 230 aa6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 COX4I2Q96KJ9 171 aa6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 ASPNQ9BXN1 380 aa6.48□□□□□ -1.37
EFCAB11-213ENST00000557685 HMX2A2RU54 273 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 SUSD5O60279 629 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 NAT2P11245 290 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 AXDND1Q5T1B0 1012 aaPredicted RBP6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 HEATR6Q6AI08 1181 aaKnown RBP6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 SDE2Q6IQ49 451 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 PRR23CQ6ZRP0 262 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 CCDC144CPQ8IYA2 1237 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 LILRB2Q8N423 598 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 TOP6BLQ8N6T0 577 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 GATA6Q92908 595 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 APBA2Q99767 749 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 C7orf69Q9H7B7 122 aa6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 TPX2Q9ULW0 747 aaKnown RBP6.47□□□□□ -1.37
EFCAB11-213ENST00000557685 ANKRD34BA5PLL1 514 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 LEFTY1O75610 366 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 FAM87AP0C7U9 286 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 AUHQ13825 339 aaKnown RBP6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 TCEAL1Q15170 157 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 CYP27C1Q4G0S4 372 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 TDRD10Q5VZ19 366 aaKnown RBP6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 FAM214BQ7L5A3 538 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 ZAR1Q86SH2 424 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 JAZF1Q86VZ6 243 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 C7orf61Q8IZ16 206 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 ZNF512BQ96KM6 892 aaPredicted RBP6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 RNPC3Q96LT9 517 aaKnown RBP6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 TBC1D32Q96NH3 1257 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 HAUS7Q99871 368 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 MKRN2Q9H000 416 aaKnown RBP6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 SUSD2Q9UGT4 822 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 ZMYM5Q9UJ78 669 aa6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 MRPL42Q9Y6G3 142 aaKnown RBP6.46□□□□□ -1.38
EFCAB11-213ENST00000557685 IQCA1LA6NCM1 817 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 CD247P20963 164 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 ADMP35318 185 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 CYP27A1Q02318 531 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 NBPF9Q3BBW0 867 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 RNF43Q68DV7 783 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 SPATC1Q76KD6 591 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 NLGN1Q8N2Q7 840 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 JMYQ8N9B5 988 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 PRDM5Q9NQX1 630 aaPredicted RBP6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 FAM86C1Q9NVL1 165 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 GTF2IRD1Q9UHL9 959 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 KDM2BQ8NHM5 1336 aa6.45□□□□□ -1.38
EFCAB11-213ENST00000557685 A0A087WZG4 1122 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 IGF2BP3O00425 579 aaKnown RBP eCLIP6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 CBFA2T2O43439 604 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 EPHX1P07099 455 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 KIR3DL1P43629 444 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 SSRP1Q08945 709 aaKnown RBP6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 SLC10A6Q3KNW5 377 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 SFRP5Q5T4F7 317 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 DUSP27Q5VZP5 1158 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 DCAF15Q66K64 600 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 LRRC47Q8N1G4 583 aaKnown RBP6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 SGSM3Q96HU1 749 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 KLHL25Q9H0H3 589 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 GBP3Q9H0R5 595 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 ZNF451Q9Y4E5 1061 aa6.44□□□□□ -1.38
EFCAB11-213ENST00000557685 CNTNAP4Q9C0A0 1308 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms