RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 TMEM240Q5SV17 173 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 PRAMEF19Q5SWL8 479 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 MFSD5Q6N075 450 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 CCDC174Q6PII3 467 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 CCDC129Q6ZRS4 1044 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 TBC1D9Q6ZT07 1266 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 RNF180Q86T96 592 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 SPATA5Q8NB90 893 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 SHCBP1Q8NEM2 672 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 XAGE2Q96GT9 111 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 TRIM34Q9BYJ4 488 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
TRAV33-201ENST00000557514 C11orf16Q9NQ32 467 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 COPRSQ9NQ92 184 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 RAI14Q9P0K7 980 aa12.81□□□□□ -0.36
TRAV33-201ENST00000557514 PGK1P00558 417 aa12.8□□□□□ -0.36
TRAV33-201ENST00000557514 PLCG2P16885 1265 aa12.8□□□□□ -0.36
TRAV33-201ENST00000557514 KCNQ1P51787 676 aa12.8□□□□□ -0.36
TRAV33-201ENST00000557514 PPIGQ13427 754 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAV33-201ENST00000557514 PSRC1Q6PGN9 363 aaPredicted RBP12.8□□□□□ -0.36
TRAV33-201ENST00000557514 ABRAQ8N0Z2 381 aa12.8□□□□□ -0.36
TRAV33-201ENST00000557514 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
TRAV33-201ENST00000557514 MAML3Q96JK9 1138 aa12.8□□□□□ -0.36
TRAV33-201ENST00000557514 SNX27Q96L92 541 aa12.8□□□□□ -0.36
TRAV33-201ENST00000557514 SPATC1LQ9H0A9 340 aa12.8□□□□□ -0.36
TRAV33-201ENST00000557514 RPAP3Q9H6T3 665 aaPredicted RBP12.8□□□□□ -0.36
TRAV33-201ENST00000557514 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAV33-201ENST00000557514 PALD1Q9ULE6 856 aa12.8□□□□□ -0.36
TRAV33-201ENST00000557514 DCDC2CA8MYV0 355 aa12.79□□□□□ -0.36
TRAV33-201ENST00000557514 ERC2O15083 957 aa12.79□□□□□ -0.36
TRAV33-201ENST00000557514 ADAMTS4O75173 837 aa12.79□□□□□ -0.36
TRAV33-201ENST00000557514 ERCC3P19447 782 aa12.79□□□□□ -0.36
TRAV33-201ENST00000557514 ARID4AP29374 1257 aaPredicted RBP12.79□□□□□ -0.36
TRAV33-201ENST00000557514 PPP4CP60510 307 aa12.79□□□□□ -0.36
TRAV33-201ENST00000557514 ACER1Q8TDN7 264 aa12.79□□□□□ -0.36
TRAV33-201ENST00000557514 TGFBRAP1Q8WUH2 860 aa12.79□□□□□ -0.36
TRAV33-201ENST00000557514 SLC5A4Q9NY91 659 aa12.79□□□□□ -0.36
TRAV33-201ENST00000557514 GPR37L1O60883 481 aa12.78□□□□□ -0.36
TRAV33-201ENST00000557514 BAG3O95817 575 aa12.78□□□□□ -0.36
TRAV33-201ENST00000557514 HLA-DOAP06340 250 aa12.78□□□□□ -0.36
TRAV33-201ENST00000557514 UBTFL1P0CB47 393 aaPredicted RBP12.78□□□□□ -0.36
TRAV33-201ENST00000557514 TATDN1Q6P1N9 297 aa12.78□□□□□ -0.36
TRAV33-201ENST00000557514 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
TRAV33-201ENST00000557514 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
TRAV33-201ENST00000557514 NOL10Q9BSC4 688 aaKnown RBP12.78□□□□□ -0.36
TRAV33-201ENST00000557514 NKX2-4Q9H2Z4 354 aa12.78□□□□□ -0.36
TRAV33-201ENST00000557514 STARD7Q9NQZ5 370 aa12.78□□□□□ -0.36
TRAV33-201ENST00000557514 MSRAQ9UJ68 235 aa12.78□□□□□ -0.36
TRAV33-201ENST00000557514 YBX2Q9Y2T7 364 aaKnown RBP12.78□□□□□ -0.36
TRAV33-201ENST00000557514 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
TRAV33-201ENST00000557514 CSF2RAP15509 400 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 MCAMP43121 646 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 ACLYP53396 1101 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 ADGRA1Q86SQ6 560 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 ALYREFQ86V81 257 aaKnown RBP12.77□□□□□ -0.37
TRAV33-201ENST00000557514 HERVK_113Q902F9 699 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 TSEN34Q9BSV6 310 aaKnown RBP12.77□□□□□ -0.37
TRAV33-201ENST00000557514 MROH8Q9H579 483 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 SLC28A3Q9HAS3 691 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 SAP30BPQ9UHR5 308 aaKnown RBP12.77□□□□□ -0.37
TRAV33-201ENST00000557514 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.77□□□□□ -0.37
TRAV33-201ENST00000557514 ZNF521Q96K83 1311 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 WDFY4Q6ZS81 3184 aa12.77□□□□□ -0.37
TRAV33-201ENST00000557514 MOXD2PA6NHM9 499 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 AKR1A1P14550 325 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 TFCP2Q12800 502 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 RAB3GAP1Q15042 981 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 CCSAPQ6IQ19 270 aaPredicted RBP12.76□□□□□ -0.37
TRAV33-201ENST00000557514 NAA16Q6N069 864 aaPredicted RBP12.76□□□□□ -0.37
TRAV33-201ENST00000557514 ZNF365Q70YC5 407 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 MB21D1Q8N884 522 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 NUP133Q8WUM0 1156 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 EHD4Q9H223 541 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 LRP2BPQ9P2M1 347 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 MROH7Q68CQ1 1323 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 SYNRGQ9UMZ2 1314 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 A0A0G2JMZ2 1700 aa12.76□□□□□ -0.37
TRAV33-201ENST00000557514 ZNF865P0CJ78 1059 aaPredicted RBP12.75□□□□□ -0.37
TRAV33-201ENST00000557514 ACRP10323 421 aa12.75□□□□□ -0.37
TRAV33-201ENST00000557514 TAL1P17542 331 aaPredicted RBP12.75□□□□□ -0.37
TRAV33-201ENST00000557514 COG2Q14746 738 aa12.75□□□□□ -0.37
TRAV33-201ENST00000557514 MICALL1Q8N3F8 863 aa12.75□□□□□ -0.37
TRAV33-201ENST00000557514 TMEM199Q8N511 208 aa12.75□□□□□ -0.37
TRAV33-201ENST00000557514 KLHDC9Q8NEP7 349 aa12.75□□□□□ -0.37
TRAV33-201ENST00000557514 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAV33-201ENST00000557514 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
TRAV33-201ENST00000557514 SERPINB13Q9UIV8 391 aa12.75□□□□□ -0.37
TRAV33-201ENST00000557514 ELP1O95163 1332 aa12.74□□□□□ -0.37
TRAV33-201ENST00000557514 FAM86C2PA6NEL3 165 aa12.74□□□□□ -0.37
TRAV33-201ENST00000557514 GUCY1A2P33402 732 aa12.74□□□□□ -0.37
TRAV33-201ENST00000557514 CDK7P50613 346 aa12.74□□□□□ -0.37
TRAV33-201ENST00000557514 ABCB5Q2M3G0 1257 aa12.74□□□□□ -0.37
TRAV33-201ENST00000557514 PPP2R2DQ66LE6 453 aa12.74□□□□□ -0.37
TRAV33-201ENST00000557514 NCAPG2Q86XI2 1143 aa12.74□□□□□ -0.37
TRAV33-201ENST00000557514 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
TRAV33-201ENST00000557514 TINF2Q9BSI4 451 aa12.74□□□□□ -0.37
TRAV33-201ENST00000557514 MTIF3Q9H2K0 278 aaKnown RBP12.74□□□□□ -0.37
TRAV33-201ENST00000557514 IL23AQ9NPF7 189 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms