RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 TCP11L1Q9NUJ3 509 aa24.69■■□□□ 1.54
SEC23A-213ENST00000557280 STX8Q9UNK0 236 aa24.69■■□□□ 1.54
SEC23A-213ENST00000557280 ADGRA2Q96PE1 1338 aa24.68■■□□□ 1.54
SEC23A-213ENST00000557280 C8orf34Q49A92 452 aa24.68■■□□□ 1.54
SEC23A-213ENST00000557280 RCSD1Q6JBY9 416 aa24.68■■□□□ 1.54
SEC23A-213ENST00000557280 RASGRP2Q7LDG7 609 aa24.68■■□□□ 1.54
SEC23A-213ENST00000557280 SH2D4AQ9H788 454 aa24.68■■□□□ 1.54
SEC23A-213ENST00000557280 SLC45A1Q9Y2W3 748 aa24.68■■□□□ 1.54
SEC23A-213ENST00000557280 RAD21O60216 631 aa24.67■■□□□ 1.54
SEC23A-213ENST00000557280 SEC24BO95487 1268 aa24.67■■□□□ 1.54
SEC23A-213ENST00000557280 MB21D2Q8IYB1 491 aaPredicted RBP24.67■■□□□ 1.54
SEC23A-213ENST00000557280 MKL1Q969V6 931 aa24.67■■□□□ 1.54
SEC23A-213ENST00000557280 ASCC2Q9H1I8 757 aaPredicted RBP24.67■■□□□ 1.54
SEC23A-213ENST00000557280 RPAP3Q9H6T3 665 aaPredicted RBP24.67■■□□□ 1.54
SEC23A-213ENST00000557280 NDUFB10O96000 172 aa24.66■■□□□ 1.54
SEC23A-213ENST00000557280 HSPA4P34932 840 aa24.66■■□□□ 1.54
SEC23A-213ENST00000557280 ANTXR2P58335 489 aa24.66■■□□□ 1.54
SEC23A-213ENST00000557280 CHST3Q7LGC8 479 aa24.66■■□□□ 1.54
SEC23A-213ENST00000557280 NCOA7Q8NI08 942 aa24.66■■□□□ 1.54
SEC23A-213ENST00000557280 CHMP4CQ96CF2 233 aa24.66■■□□□ 1.54
SEC23A-213ENST00000557280 PARK7Q99497 189 aaKnown RBP24.66■■□□□ 1.54
SEC23A-213ENST00000557280 NUP88Q99567 741 aaPredicted RBP24.66■■□□□ 1.54
SEC23A-213ENST00000557280 USP26Q9BXU7 913 aa24.66■■□□□ 1.54
SEC23A-213ENST00000557280 ZFYVE28Q9HCC9 887 aa24.66■■□□□ 1.54
SEC23A-213ENST00000557280 GOPCQ9HD26 462 aa24.66■■□□□ 1.54
SEC23A-213ENST00000557280 F5H6K3 240 aa24.65■■□□□ 1.54
SEC23A-213ENST00000557280 HOXA7P31268 230 aaPredicted RBP24.65■■□□□ 1.54
SEC23A-213ENST00000557280 LBX1P52954 281 aa24.65■■□□□ 1.54
SEC23A-213ENST00000557280 KLRC3Q07444 240 aa24.65■■□□□ 1.54
SEC23A-213ENST00000557280 TRDNQ13061 729 aa24.65■■□□□ 1.54
SEC23A-213ENST00000557280 ADCK5Q3MIX3 580 aa24.65■■□□□ 1.54
SEC23A-213ENST00000557280 RALYLQ86SE5 291 aaKnown RBP24.65■■□□□ 1.54
SEC23A-213ENST00000557280 ENAHQ8N8S7 591 aaPredicted RBP24.65■■□□□ 1.54
SEC23A-213ENST00000557280 LPAR1Q92633 364 aa24.65■■□□□ 1.54
SEC23A-213ENST00000557280 KCNB2Q92953 911 aa24.65■■□□□ 1.54
SEC23A-213ENST00000557280 ZSCAN10Q96SZ4 725 aaPredicted RBP24.65■■□□□ 1.54
SEC23A-213ENST00000557280 TMEM47Q9BQJ4 181 aa24.65■■□□□ 1.54
SEC23A-213ENST00000557280 TNKSO95271 1327 aa24.64■■□□□ 1.54
SEC23A-213ENST00000557280 CTCFP49711 727 aaPredicted RBP24.64■■□□□ 1.54
SEC23A-213ENST00000557280 FAM83BQ5T0W9 1011 aa24.64■■□□□ 1.54
SEC23A-213ENST00000557280 RNF20Q5VTR2 975 aa24.64■■□□□ 1.54
SEC23A-213ENST00000557280 POTEEQ6S8J3 1075 aa24.64■■□□□ 1.54
SEC23A-213ENST00000557280 CPA4Q9UI42 421 aa24.64■■□□□ 1.54
SEC23A-213ENST00000557280 TLR2O60603 784 aa24.63■■□□□ 1.53
SEC23A-213ENST00000557280 PEX10O60683 326 aa24.63■■□□□ 1.53
SEC23A-213ENST00000557280 NT5C2P49902 561 aa24.63■■□□□ 1.53
SEC23A-213ENST00000557280 IRX3P78415 501 aaPredicted RBP24.63■■□□□ 1.53
SEC23A-213ENST00000557280 PABPC4Q13310 644 aaKnown RBP eCLIP24.63■■□□□ 1.53
SEC23A-213ENST00000557280 CATSPERGQ6ZRH7 1159 aa24.63■■□□□ 1.53
SEC23A-213ENST00000557280 IQCA1Q86XH1 822 aa24.63■■□□□ 1.53
SEC23A-213ENST00000557280 GMCL1P1Q8NEA9 526 aa24.63■■□□□ 1.53
SEC23A-213ENST00000557280 SYNPO2Q9UMS6 1093 aa24.63■■□□□ 1.53
SEC23A-213ENST00000557280 SNX14Q9Y5W7 946 aa24.63■■□□□ 1.53
SEC23A-213ENST00000557280 USP17L15C9J2P7 530 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 USP17L13C9JLJ4 530 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 USP17L11C9JVI0 530 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 USP17L18D6R9N7 530 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 USP17L22D6RA61 530 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 USP17L17D6RBQ6 530 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 USP17L19D6RCP7 530 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 USP17L20D6RJB6 530 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 GPR25O00155 361 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 WDR46O15213 610 aaKnown RBP24.62■■□□□ 1.53
SEC23A-213ENST00000557280 OSBPP22059 807 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 USP17L24Q0WX57 530 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 SEC23AQ15436 765 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 P2RX7Q99572 595 aaKnown RBP24.62■■□□□ 1.53
SEC23A-213ENST00000557280 UBAC1Q9BSL1 405 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 TANGO6Q9C0B7 1094 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 SENP2Q9HC62 589 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 PNMA3Q9UL41 463 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 MTMR7Q9Y216 660 aa24.62■■□□□ 1.53
SEC23A-213ENST00000557280 RLFQ13129 1914 aa24.61■■□□□ 1.53
SEC23A-213ENST00000557280 TOP1P11387 765 aaKnown RBP24.61■■□□□ 1.53
SEC23A-213ENST00000557280 TSGA10IPQ3SY00 556 aa24.61■■□□□ 1.53
SEC23A-213ENST00000557280 PPP4R3BQ5MIZ7 849 aa24.61■■□□□ 1.53
SEC23A-213ENST00000557280 SLFN13Q68D06 897 aa24.61■■□□□ 1.53
SEC23A-213ENST00000557280 C17orf99Q6UX52 265 aa24.61■■□□□ 1.53
SEC23A-213ENST00000557280 SMCR8Q8TEV9 937 aaPredicted RBP24.61■■□□□ 1.53
SEC23A-213ENST00000557280 GPHNQ9NQX3 736 aaPredicted RBP24.61■■□□□ 1.53
SEC23A-213ENST00000557280 FBXO28Q9NVF7 368 aa24.61■■□□□ 1.53
SEC23A-213ENST00000557280 PARP14Q460N5 1801 aa24.61■■□□□ 1.53
SEC23A-213ENST00000557280 EPB41L2O43491 1005 aaKnown RBP24.6■■□□□ 1.53
SEC23A-213ENST00000557280 ZKSCAN1P17029 563 aaPredicted RBP24.6■■□□□ 1.53
SEC23A-213ENST00000557280 HERVK_113P62684 666 aa24.6■■□□□ 1.53
SEC23A-213ENST00000557280 CAP1Q01518 475 aa24.6■■□□□ 1.53
SEC23A-213ENST00000557280 DGKHQ86XP1 1220 aa24.6■■□□□ 1.53
SEC23A-213ENST00000557280 ZNF296Q8WUU4 475 aaPredicted RBP24.6■■□□□ 1.53
SEC23A-213ENST00000557280 ANKS1AQ92625 1134 aa24.6■■□□□ 1.53
SEC23A-213ENST00000557280 SPDYE16A6NNV3 312 aaPredicted RBP24.59■■□□□ 1.53
SEC23A-213ENST00000557280 PRC1O43663 620 aa24.59■■□□□ 1.53
SEC23A-213ENST00000557280 BCRP11274 1271 aa24.59■■□□□ 1.53
SEC23A-213ENST00000557280 MCCP23508 829 aa24.59■■□□□ 1.53
SEC23A-213ENST00000557280 TTC14Q96N46 770 aa24.59■■□□□ 1.53
SEC23A-213ENST00000557280 ZSWIM8A7E2V4 1837 aa24.58■■□□□ 1.53
SEC23A-213ENST00000557280 IFIT3O14879 490 aaKnown RBP24.58■■□□□ 1.53
SEC23A-213ENST00000557280 FLOT1O75955 427 aa24.58■■□□□ 1.53
SEC23A-213ENST00000557280 CPA1P15085 419 aa24.58■■□□□ 1.53
SEC23A-213ENST00000557280 ANKRD13CQ8N6S4 541 aa24.58■■□□□ 1.53
SEC23A-213ENST00000557280 TCEANC2Q96MN5 208 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms