RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SH3GL3Q99963 347 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 RASSF10A6NK89 507 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 SESN3P58005 492 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 TMCO4Q5TGY1 634 aa9.69□□□□□ -0.86
SYNE3-205ENST00000557275 LRRC9Q6ZRR7 1453 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 BAG2O95816 211 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 KRR1Q13601 381 aaKnown RBP9.68□□□□□ -0.86
SYNE3-205ENST00000557275 SCYL3Q8IZE3 742 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 MMEP08473 750 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 FBXL13Q8NEE6 735 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 DONSONQ9NYP3 566 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 GSDMAQ96QA5 445 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 SYCE1LA8MT33 242 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 DCTN3O75935 186 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 MKL2Q9ULH7 1088 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 ZNF804AQ7Z570 1209 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 MRFAP1L1Q96HT8 127 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 PRDM11Q9NQV5 511 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 TRAF5O00463 557 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 GPC4O75487 556 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 NEUROG2Q9H2A3 272 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.68□□□□□ -0.86
SYNE3-205ENST00000557275 ST5P78524 1137 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 PRPSAP1Q14558 356 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 USP48Q86UV5 1035 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 NUMA1Q14980 2115 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 ZRANB2O95218 330 aaKnown RBP eCLIP9.68□□□□□ -0.86
SYNE3-205ENST00000557275 TRIM50Q86XT4 487 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 DNAJC25Q9H1X3 360 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 STMN3Q9NZ72 180 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 KDM3AQ9Y4C1 1321 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 RAD54L2Q9Y4B4 1467 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 ZNF189O75820 626 aaPredicted RBP9.68□□□□□ -0.86
SYNE3-205ENST00000557275 TCP1P17987 556 aaKnown RBP9.68□□□□□ -0.86
SYNE3-205ENST00000557275 NBPF3Q9H094 633 aa9.68□□□□□ -0.86
SYNE3-205ENST00000557275 KIAA1107Q9UPP5 1409 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 SNX1Q13596 522 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 CWF19L2Q2TBE0 894 aaKnown RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 TRIM11Q96F44 468 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 PAK1Q13153 545 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 CALR3Q96L12 384 aaKnown RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 ITGB1BP2Q9UKP3 347 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 ITSN2Q9NZM3 1697 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 EIF3BP55884 814 aaKnown RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 HADHQ16836 314 aaKnown RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 TXNDC2Q86VQ3 553 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 CABP2Q9NPB3 220 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 ZMYND8Q9ULU4 1186 aaPredicted RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 NPR1P16066 1061 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 MCMDC2Q4G0Z9 681 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 KLC3Q6P597 504 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 DPH6Q7L8W6 267 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 VTI1AQ96AJ9 217 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 KLF18A0A0U1RQI7 1052 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 ABTB1Q969K4 478 aaPredicted RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 PARVBQ9HBI1 364 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 MEIS1O00470 390 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 ARHGAP44Q17R89 818 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 ARHGAP45Q92619 1136 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 GOLGA8IPA6NC78 632 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 MYCNP04198 464 aaPredicted RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 IGBP1P78318 339 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 SLFN5Q08AF3 891 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 DBNLQ9UJU6 430 aaKnown RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 DTNBO60941 627 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 LAMC2Q13753 1193 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 NT5C3AQ9H0P0 336 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 SOS2Q07890 1332 aaPredicted RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 TMPOP42166 694 aaKnown RBP9.67□□□□□ -0.86
SYNE3-205ENST00000557275 TMX3Q96JJ7 454 aa9.67□□□□□ -0.86
SYNE3-205ENST00000557275 TMCC1O94876 653 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 CHEK2O96017 543 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 NSFP46459 744 aaKnown RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 KIF23Q02241 960 aaPredicted RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 BBS5Q8N3I7 341 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 DEAF1O75398 565 aaPredicted RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 SFMBT2Q5VUG0 894 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 HDAC11Q96DB2 347 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 WDR70Q9NW82 654 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 CHCHD3Q9NX63 227 aaKnown RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 MRPS15P82914 257 aaKnown RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 HDAC1Q13547 482 aaPredicted RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 C19orf60Q96EN9 201 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 TRIM33Q9UPN9 1127 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 FAM95CA0A1B0GW59 222 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 STX17P56962 302 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 BCAS4Q8TDM0 211 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 ANKRD2Q9GZV1 360 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 SUCLA2Q9P2R7 463 aaPredicted RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 LCMT1Q9UIC8 334 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 GOLGA8MH3BSY2 632 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 INHBAP08476 426 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 GSTA4O15217 222 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 NCAPH2Q6IBW4 605 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 SAAL1Q96ER3 474 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 IQCB1Q15051 598 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 SOS1Q07889 1333 aaPredicted RBP9.66□□□□□ -0.86
SYNE3-205ENST00000557275 CNTRLQ7Z7A1 2325 aa9.66□□□□□ -0.86
SYNE3-205ENST00000557275 LPXNO60711 386 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms