RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SLC5A1P13866 664 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 CCNA1P78396 465 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 INSM1Q01101 510 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-245ENST00000556958 MAP3K10Q02779 954 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 GCKRQ14397 625 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 GRIK5Q16478 980 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 TSR1Q2NL82 804 aaKnown RBP7.28□□□□□ -1.24
ATXN3-245ENST00000556958 TMEM240Q5SV17 173 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 PSRC1Q6PGN9 363 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-245ENST00000556958 ZSCAN29Q8IWY8 852 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-245ENST00000556958 ZNF280CQ8ND82 737 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 FERMT2Q96AC1 680 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 TOX2Q96NM4 488 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 NKX2-4Q9H2Z4 354 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 CNNM1Q9NRU3 951 aa7.28□□□□□ -1.24
ATXN3-245ENST00000556958 ALPK3Q96L96 1907 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 PI4KAP2A4QPH2 592 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 SLC15A5A6NIM6 579 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 NEURL1BA8MQ27 555 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 ENTPD3O75355 529 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 TIMP1P01033 207 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 HOXA7P31268 230 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-245ENST00000556958 SSTR3P32745 418 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-245ENST00000556958 HMGCS2P54868 508 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 CCDC57Q2TAC2 916 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 SH3D19Q5HYK7 790 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 RASIP1Q5U651 963 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 MFSD5Q6N075 450 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 CDC42EP5Q6NZY7 148 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 FBXO33Q7Z6M2 555 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 GPIHBP1Q8IV16 184 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 TMEM199Q8N511 208 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 PI4KAP1Q8N8J0 262 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 AS3MTQ9HBK9 375 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 USP40Q9NVE5 1235 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 TMOD4Q9NZQ9 345 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 CHMP3Q9Y3E7 222 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 DAGLAQ9Y4D2 1042 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 MTCH2Q9Y6C9 303 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 IVNS1ABPQ9Y6Y0 642 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 ZDBF2Q9HCK1 2354 aa7.27□□□□□ -1.25
ATXN3-245ENST00000556958 DDX60LQ5H9U9 1706 aaKnown RBP7.27□□□□□ -1.25
ATXN3-245ENST00000556958 SEPT4O43236 478 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 DCXO43602 365 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 PQBP1O60828 265 aaKnown RBP7.26□□□□□ -1.25
ATXN3-245ENST00000556958 RNF40O75150 1001 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 HOXC6P09630 235 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 CYP2C19P33261 490 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 ZEB1P37275 1124 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-245ENST00000556958 TMPOP42166 694 aaKnown RBP7.26□□□□□ -1.25
ATXN3-245ENST00000556958 HERVK_113P62684 666 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 ERVK-9P63128 1117 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 ERVK-24P63145 666 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 NFIAQ12857 509 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 LRRC41Q15345 812 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 CWF19L2Q2TBE0 894 aaKnown RBP7.26□□□□□ -1.25
ATXN3-245ENST00000556958 EPHA10Q5JZY3 1008 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 CCDC30Q5VVM6 783 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 PPP2R2DQ66LE6 453 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 ZNF365Q70YC5 407 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 IRF2BPLQ9H1B7 796 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 MYH16Q9H6N6 1097 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 CD320Q9NPF0 282 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 DACH1Q9UI36 760 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 ZNF521Q96K83 1311 aa7.26□□□□□ -1.25
ATXN3-245ENST00000556958 USP17L5A8MUK1 530 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 FGBP02675 491 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 CYBAP13498 195 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 FAAP100Q0VG06 881 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 PKN1Q16512 942 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 Q3C1V9 767 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 WDR78Q5VTH9 848 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 C16orf59Q7L2K0 433 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 ANKRD33Q7Z3H0 272 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 RNF180Q86T96 592 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 FAM178BQ8IXR5 827 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 WDR66Q8TBY9 1149 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 CDCA7LQ96GN5 454 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 OSBPL5Q9H0X9 879 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-245ENST00000556958 PORCNQ9H237 461 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 TXNRD2Q9NNW7 524 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 FLRT1Q9NZU1 646 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 IQSEC3Q9UPP2 1182 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-245ENST00000556958 PHF24Q9UPV7 400 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 CHD8Q9HCK8 2581 aa7.25□□□□□ -1.25
ATXN3-245ENST00000556958 C19orf81C9J6K1 198 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 APBB1O00213 710 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 RGS3P49796 1198 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 LIAT1Q6ZQX7 453 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 DPP9Q86TI2 863 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 CCDC84Q86UT8 332 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-245ENST00000556958 ZFPM1Q8IX07 1006 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 TRPV1Q8NER1 839 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 NUP133Q8WUM0 1156 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 TATDN2Q93075 761 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 PHOX2BQ99453 314 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 PAGR1Q9BTK6 254 aa7.24□□□□□ -1.25
ATXN3-245ENST00000556958 IDI2Q9BXS1 227 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms