RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 USP3Q9Y6I4 520 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 SETBP1Q9Y6X0 1596 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 HECW2Q9P2P5 1572 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 CPSF1Q10570 1443 aaKnown RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 H3BQF6 201 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 TGFBR3LH3BV60 316 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 CHUKO15111 745 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 ZSCAN12O43309 604 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 FIBPO43427 364 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 SHOX2O60902 331 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 HMMRO75330 724 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 MICAL2O94851 1124 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 U2AF1L5P0DN76 240 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 GCFC2P16383 781 aaKnown RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 CHMLP26374 656 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 TXLNAP40222 546 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 AARSP49588 968 aaKnown RBP eCLIP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 PDE1AP54750 535 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 CHMP4BP1P59074 171 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 U2AF1Q01081 240 aaKnown RBP eCLIP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 CLN3Q13286 438 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 RASA3Q14644 834 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 STX1AQ16623 288 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 LONRF2Q1L5Z9 754 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 PREPLQ4J6C6 727 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 WLSQ5T9L3 541 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 VPS53Q5VIR6 699 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 IER5Q5VY09 327 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 TRIM65Q6PJ69 517 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 PI16Q6UXB8 463 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 ANKRD13DQ6ZTN6 518 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 ANKRD18AQ8IVF6 992 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 AMOTL1Q8IY63 956 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 TEX11Q8IYF3 940 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 PRPF38AQ8NAV1 312 aaKnown RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 GIMAP7Q8NHV1 300 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 CTCFLQ8NI51 663 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 ANKRD24Q8TF21 1146 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 APPBP2Q92624 585 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 GOLGA1Q92805 767 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 ERCC4Q92889 916 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 FAXDC2Q96IV6 333 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 NT5C1AQ9BXI3 368 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 TEX13AQ9BXU3 409 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 NIFKQ9BYG3 293 aaKnown RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 BCO2Q9BYV7 579 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 IRF2BPLQ9H1B7 796 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 ALDH8A1Q9H2A2 487 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 ZCCHC17Q9NP64 241 aaKnown RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 ANO10Q9NW15 660 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 MCM8Q9UJA3 840 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 L1RE1Q9UN81 338 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 SH3BP1Q9Y3L3 701 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 GPC6Q9Y625 555 aaPredicted RBP6.11□□□□□ -1.43
PCNX1-214ENST00000556849 PARP3Q9Y6F1 533 aa6.11□□□□□ -1.43
PCNX1-214ENST00000556849 MAGI1Q96QZ7 1491 aaPredicted RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 PNPLA6Q8IY17 1366 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 H0YHG0 523 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 TPD52L2O43399 206 aaKnown RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 SEC31AO94979 1220 aaKnown RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 GPTP24298 496 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 ELF1P32519 619 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 ADD1P35611 737 aaKnown RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 ETFBP38117 255 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 EIF4A3P38919 411 aaKnown RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 MNAT1P51948 309 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 GNAI1P63096 354 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 SARNPP82979 210 aaKnown RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 GRIK3Q13003 919 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 PLEKHG6Q3KR16 790 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 TNNI3KQ59H18 835 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 TJAP1Q5JTD0 557 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 BEND6Q5SZJ8 279 aaPredicted RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 GORABQ5T7V8 394 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 SH3PXD2AQ5TCZ1 1133 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 ATL3Q6DD88 541 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 CEP85Q6P2H3 762 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 NXPE4Q6UWF7 544 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 THSD4Q6ZMP0 1018 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 GBP6Q6ZN66 633 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 ZNF438Q7Z4V0 828 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 TTC6Q86TZ1 520 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 EHBP1Q8NDI1 1231 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 CABS1Q96KC9 395 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 TMEM74Q96NL1 305 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 PAGR1Q9BTK6 254 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 PARD6BQ9BYG5 372 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 FHDC1Q9C0D6 1143 aaPredicted RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 NAT10Q9H0A0 1025 aaKnown RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 CCDC113Q9H0I3 377 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 VEZTQ9HBM0 779 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 PDRG1Q9NUG6 133 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 DDX56Q9NY93 547 aaKnown RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 CHPF2Q9P2E5 772 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 PRKAG3Q9UGI9 489 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 GGA2Q9UJY4 613 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 EFR3BQ9Y2G0 817 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.1□□□□□ -1.43
PCNX1-214ENST00000556849 GLI2P10070 1586 aa6.1□□□□□ -1.43
PCNX1-214ENST00000556849 CDK12Q9NYV4 1490 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms