RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 CYP2B6P20813 491 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 PDE1AP54750 535 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 ZMYM1Q5SVZ6 1142 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 WDR78Q5VTH9 848 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 GPR142Q7Z601 462 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 PLEKHH3Q7Z736 793 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 ZNF444Q8N0Y2 327 aaPredicted RBP12.89□□□□□ -0.35
XRCC3-216ENST00000556682 UNC93B1Q9H1C4 597 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 VCPKMTQ9H867 229 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 GOPCQ9HD26 462 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 IVNS1ABPQ9Y6Y0 642 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 NAV1Q8NEY1 1877 aa12.89□□□□□ -0.35
XRCC3-216ENST00000556682 SPDYE16A6NNV3 312 aaPredicted RBP12.88□□□□□ -0.35
XRCC3-216ENST00000556682 WDR46O15213 610 aaKnown RBP12.88□□□□□ -0.35
XRCC3-216ENST00000556682 SGPL1O95470 568 aa12.88□□□□□ -0.35
XRCC3-216ENST00000556682 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
XRCC3-216ENST00000556682 RGS2P41220 211 aa12.88□□□□□ -0.35
XRCC3-216ENST00000556682 PDE4BQ07343 736 aa12.88□□□□□ -0.35
XRCC3-216ENST00000556682 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
XRCC3-216ENST00000556682 U2AF1L4Q8WU68 220 aaKnown RBP12.88□□□□□ -0.35
XRCC3-216ENST00000556682 NAPBQ9H115 298 aa12.88□□□□□ -0.35
XRCC3-216ENST00000556682 PORCNQ9H237 461 aa12.88□□□□□ -0.35
XRCC3-216ENST00000556682 KIAA0100Q14667 2235 aaKnown RBP12.88□□□□□ -0.35
XRCC3-216ENST00000556682 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
XRCC3-216ENST00000556682 SALL3Q9BXA9 1300 aa12.88□□□□□ -0.35
XRCC3-216ENST00000556682 SMIM22K7EJ46 135 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 PEX10O60683 326 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 FLOT1O75955 427 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 TFRCP02786 760 aaKnown RBP12.87□□□□□ -0.35
XRCC3-216ENST00000556682 B4GALNT3Q6L9W6 998 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 SIAH1Q8IUQ4 282 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 SMC5Q8IY18 1101 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 SPICE1Q8N0Z3 855 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 STK11IPQ8N1F8 1099 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 EXOC6Q8TAG9 804 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
XRCC3-216ENST00000556682 LNPKQ9C0E8 428 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 HMX1Q9NP08 348 aaPredicted RBP12.87□□□□□ -0.35
XRCC3-216ENST00000556682 HTTP42858 3142 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 DDX60LQ5H9U9 1706 aaKnown RBP12.87□□□□□ -0.35
XRCC3-216ENST00000556682 RPTORQ8N122 1335 aa12.87□□□□□ -0.35
XRCC3-216ENST00000556682 SLC15A5A6NIM6 579 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 RAD21O60216 631 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 CNMDO75829 334 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 ZKSCAN1P17029 563 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-216ENST00000556682 RASA1P20936 1047 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 DSG3P32926 999 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 MORN1Q5T089 497 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 CLEC10AQ8IUN9 316 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 DEFB118Q96PH6 123 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 APBA2Q99767 749 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 EPB41L4AQ9HCS5 686 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-216ENST00000556682 PAK6Q9NQU5 681 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-216ENST00000556682 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 BTBD7Q9P203 1132 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 NYAP2Q9P242 653 aa12.86□□□□□ -0.35
XRCC3-216ENST00000556682 SUPT16HQ9Y5B9 1047 aaKnown RBP12.86□□□□□ -0.35
XRCC3-216ENST00000556682 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 STRNO43815 780 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 TSPY3P0CV98 308 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 TSPY8P0CW00 308 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 PTPREP23469 700 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 NUCB1Q02818 461 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 PPARAQ07869 468 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 MAP2K5Q13163 448 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 PLS1Q14651 629 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 SHCBP1Q8NEM2 672 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 USP6NLQ92738 828 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 SHISA4Q96DD7 197 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 HTATIP2Q9BUP3 242 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 SPATC1LQ9H0A9 340 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.85□□□□□ -0.35
XRCC3-216ENST00000556682 MGAMO43451 1857 aa12.85□□□□□ -0.35
XRCC3-216ENST00000556682 RBBP6Q7Z6E9 1792 aaKnown RBP12.84□□□□□ -0.35
XRCC3-216ENST00000556682 PRDM1O75626 825 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 FARP2O94887 1054 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-216ENST00000556682 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
XRCC3-216ENST00000556682 MCMDC2Q4G0Z9 681 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 MFSD14CQ5VZR4 134 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 TRIB2Q92519 343 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 DPF3Q92784 378 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
XRCC3-216ENST00000556682 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
XRCC3-216ENST00000556682 MROH8Q9H579 483 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 SLC5A4Q9NY91 659 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 CLIP2Q9UDT6 1046 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 MYH7P12883 1935 aa12.84□□□□□ -0.35
XRCC3-216ENST00000556682 SLC25A27O95847 323 aa12.83□□□□□ -0.36
XRCC3-216ENST00000556682 TTLL1O95922 423 aa12.83□□□□□ -0.36
XRCC3-216ENST00000556682 IGHDP01880 384 aa12.83□□□□□ -0.36
XRCC3-216ENST00000556682 ERCC3P19447 782 aa12.83□□□□□ -0.36
XRCC3-216ENST00000556682 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.36
XRCC3-216ENST00000556682 DPP9Q86TI2 863 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms