RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 RPAP3Q9H6T3 665 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-211ENST00000556636 ZNF287Q9HBT7 754 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 ARHGEF10LQ9HCE6 1279 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 IL17RBQ9NRM6 502 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 MTMR4Q9NYA4 1195 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 SRRDQ9UH36 339 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 PTCH2Q9Y6C5 1203 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 CENPFP49454 3210 aa12.75□□□□□ -0.37
GABRB3-211ENST00000556636 ORC4O43929 436 aa12.74□□□□□ -0.37
GABRB3-211ENST00000556636 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
GABRB3-211ENST00000556636 SLC3A2P08195 630 aaKnown RBP12.74□□□□□ -0.37
GABRB3-211ENST00000556636 NOVP48745 357 aa12.74□□□□□ -0.37
GABRB3-211ENST00000556636 MFAP1P55081 439 aaKnown RBP12.74□□□□□ -0.37
GABRB3-211ENST00000556636 SPICE1Q8N0Z3 855 aa12.74□□□□□ -0.37
GABRB3-211ENST00000556636 LPAR1Q92633 364 aa12.74□□□□□ -0.37
GABRB3-211ENST00000556636 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
GABRB3-211ENST00000556636 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
GABRB3-211ENST00000556636 GJD2Q9UKL4 321 aa12.74□□□□□ -0.37
GABRB3-211ENST00000556636 GABRQQ9UN88 632 aa12.74□□□□□ -0.37
GABRB3-211ENST00000556636 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-211ENST00000556636 F5H6K3 240 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 HOXD10P28358 340 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 PRMT2P55345 433 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 FCGRTP55899 365 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 HAND2P61296 217 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 ATP2B2Q01814 1243 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 KLRC3Q07444 240 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 COG2Q14746 738 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 GPRC5AQ8NFJ5 357 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 ARMC5Q96C12 935 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 SH2D4AQ9H788 454 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 HOXC10Q9NYD6 342 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 BTBD7Q9P203 1132 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 CLIP2Q9UDT6 1046 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 RABGAP1Q9Y3P9 1069 aa12.73□□□□□ -0.37
GABRB3-211ENST00000556636 PLIN4Q96Q06 1357 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 WDR46O15213 610 aaKnown RBP12.72□□□□□ -0.37
GABRB3-211ENST00000556636 NMT2O60551 498 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 TSPY3P0CV98 308 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 TSPY8P0CW00 308 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 DSG3P32926 999 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 ERVK-24P63145 666 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 PRKCZQ05513 592 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 TBC1D10CQ8IV04 446 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 PORCNQ9H237 461 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 ZSWIM8A7E2V4 1837 aa12.72□□□□□ -0.37
GABRB3-211ENST00000556636 GREB1LQ9C091 1923 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-211ENST00000556636 SGSM2O43147 1006 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 RANBP6O60518 1105 aaKnown RBP12.71□□□□□ -0.37
GABRB3-211ENST00000556636 TTLL1O95922 423 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 NDUFB10O96000 172 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 FLT3LGP49771 235 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 RGS19P49795 217 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 PTH1RQ03431 593 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 AKNAD1Q5T1N1 836 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 GTF3C2Q8WUA4 911 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-211ENST00000556636 STAG1Q8WVM7 1258 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 PAGR1Q9BTK6 254 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 GOPCQ9HD26 462 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 FBXO28Q9NVF7 368 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.37
GABRB3-211ENST00000556636 MYPNQ86TC9 1320 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 TSPY2A6NKD2 308 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 ZNF213O14771 459 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 TNPO2O14787 897 aaKnown RBP12.7□□□□□ -0.38
GABRB3-211ENST00000556636 IRF5Q13568 498 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 BMP2KLQ5H9B9 411 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 MFSD6Q6ZSS7 791 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 SH3TC2Q8TF17 1288 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 ZNF333Q96JL9 665 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 NUP88Q99567 741 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-211ENST00000556636 TANGO6Q9C0B7 1094 aa12.7□□□□□ -0.38
GABRB3-211ENST00000556636 RAD50Q92878 1312 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 FLOT1O75955 427 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 PCP11498 1178 aaKnown RBP12.69□□□□□ -0.38
GABRB3-211ENST00000556636 RRP12Q5JTH9 1297 aaKnown RBP12.69□□□□□ -0.38
GABRB3-211ENST00000556636 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 LRRC47Q8N1G4 583 aaKnown RBP12.69□□□□□ -0.38
GABRB3-211ENST00000556636 GMCL1P1Q8NEA9 526 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 REPS2Q8NFH8 660 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 RUFY2Q8WXA3 655 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 USP6NLQ92738 828 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 COA7Q96BR5 231 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 ATG4CQ96DT6 458 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 BRCA2P51587 3418 aa12.69□□□□□ -0.38
GABRB3-211ENST00000556636 NEDD4P46934 1319 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 DOCK3Q8IZD9 2030 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 NEFLP07196 543 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 CENPBP07199 599 aaPredicted RBP12.68□□□□□ -0.38
GABRB3-211ENST00000556636 MAPK4P31152 587 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 GRK4P32298 578 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 TMEM132BQ14DG7 1078 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 MORN1Q5T089 497 aa12.68□□□□□ -0.38
GABRB3-211ENST00000556636 ERICH6BQ5W0A0 696 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms