RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 UBAC1Q9BSL1 405 aa28.33■■■□□ 2.12
RCCD1-206ENST00000556618 SYNPO2Q9UMS6 1093 aa28.33■■■□□ 2.12
RCCD1-206ENST00000556618 MCM5P33992 734 aa28.32■■■□□ 2.12
RCCD1-206ENST00000556618 DGKHQ86XP1 1220 aa28.32■■■□□ 2.12
RCCD1-206ENST00000556618 VCPKMTQ9H867 229 aa28.32■■■□□ 2.12
RCCD1-206ENST00000556618 KIAA1755Q5JYT7 1200 aa28.31■■■□□ 2.12
RCCD1-206ENST00000556618 ANKRD23Q86SG2 305 aa28.31■■■□□ 2.12
RCCD1-206ENST00000556618 LRRC47Q8N1G4 583 aaKnown RBP28.31■■■□□ 2.12
RCCD1-206ENST00000556618 FAM43AQ8N2R8 423 aa28.31■■■□□ 2.12
RCCD1-206ENST00000556618 ENAHQ8N8S7 591 aaPredicted RBP28.31■■■□□ 2.12
RCCD1-206ENST00000556618 JMYQ8N9B5 988 aa28.31■■■□□ 2.12
RCCD1-206ENST00000556618 ANKS1AQ92625 1134 aa28.31■■■□□ 2.12
RCCD1-206ENST00000556618 GOPCQ9HD26 462 aa28.31■■■□□ 2.12
RCCD1-206ENST00000556618 TNKSO95271 1327 aa28.31■■■□□ 2.12
RCCD1-206ENST00000556618 TREML2Q5T2D2 321 aa28.3■■■□□ 2.12
RCCD1-206ENST00000556618 OTUD7BQ6GQQ9 843 aa28.3■■■□□ 2.12
RCCD1-206ENST00000556618 JAKMIP1Q96N16 626 aaKnown RBP28.3■■■□□ 2.12
RCCD1-206ENST00000556618 TMEM47Q9BQJ4 181 aa28.3■■■□□ 2.12
RCCD1-206ENST00000556618 AGTPBP1Q9UPW5 1226 aa28.3■■■□□ 2.12
RCCD1-206ENST00000556618 PRC1O43663 620 aa28.29■■■□□ 2.12
RCCD1-206ENST00000556618 TOP1P11387 765 aaKnown RBP28.29■■■□□ 2.12
RCCD1-206ENST00000556618 MAP2K1Q02750 393 aaPredicted RBP28.29■■■□□ 2.12
RCCD1-206ENST00000556618 SEC23AQ15436 765 aa28.29■■■□□ 2.12
RCCD1-206ENST00000556618 BACH2Q9BYV9 841 aa28.29■■■□□ 2.12
RCCD1-206ENST00000556618 F5H6K3 240 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 IFIT3O14879 490 aaKnown RBP28.28■■■□□ 2.12
RCCD1-206ENST00000556618 HMGB1P09429 215 aaKnown RBP28.28■■■□□ 2.12
RCCD1-206ENST00000556618 KLRC3Q07444 240 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 GMCL1P1Q8NEA9 526 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 LPAR1Q92633 364 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 PDHXO00330 501 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 RAD21O60216 631 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 VCAM1P19320 739 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 ANAPC15P60006 121 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 EXOSC10Q01780 885 aaKnown RBP28.28■■■□□ 2.12
RCCD1-206ENST00000556618 SART3Q15020 963 aaKnown RBP28.28■■■□□ 2.12
RCCD1-206ENST00000556618 DHX32Q7L7V1 743 aaKnown RBP28.28■■■□□ 2.12
RCCD1-206ENST00000556618 SPICE1Q8N0Z3 855 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 IGDCC4Q8TDY8 1250 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 MTA3Q9BTC8 594 aa28.28■■■□□ 2.12
RCCD1-206ENST00000556618 ZCCHC17Q9NP64 241 aaKnown RBP28.28■■■□□ 2.12
RCCD1-206ENST00000556618 ERICH2A1L162 156 aa28.27■■■□□ 2.12
RCCD1-206ENST00000556618 PSMA5P28066 241 aa28.27■■■□□ 2.12
RCCD1-206ENST00000556618 SLC45A1Q9Y2W3 748 aa28.27■■■□□ 2.12
RCCD1-206ENST00000556618 NDUFB10O96000 172 aa28.26■■■□□ 2.11
RCCD1-206ENST00000556618 ALDH1A1P00352 501 aa28.26■■■□□ 2.11
RCCD1-206ENST00000556618 HOXA7P31268 230 aaPredicted RBP28.26■■■□□ 2.11
RCCD1-206ENST00000556618 IFIT1BQ5T764 474 aaKnown RBP28.26■■■□□ 2.11
RCCD1-206ENST00000556618 WDR19Q8NEZ3 1342 aa28.25■■■□□ 2.11
RCCD1-206ENST00000556618 TMEM67Q5HYA8 995 aa28.25■■■□□ 2.11
RCCD1-206ENST00000556618 BLOC1S2Q6QNY1 142 aa28.25■■■□□ 2.11
RCCD1-206ENST00000556618 TMEM87BQ96K49 555 aa28.25■■■□□ 2.11
RCCD1-206ENST00000556618 TM6SF1Q9BZW5 370 aa28.25■■■□□ 2.11
RCCD1-206ENST00000556618 WBP1LQ9NX94 342 aa28.25■■■□□ 2.11
RCCD1-206ENST00000556618 RNF186Q9NXI6 227 aa28.25■■■□□ 2.11
RCCD1-206ENST00000556618 WDR46O15213 610 aaKnown RBP28.24■■■□□ 2.11
RCCD1-206ENST00000556618 CPA1P15085 419 aa28.24■■■□□ 2.11
RCCD1-206ENST00000556618 CASTP20810 708 aaKnown RBP28.24■■■□□ 2.11
RCCD1-206ENST00000556618 PABPC4Q13310 644 aaKnown RBP eCLIP28.24■■■□□ 2.113e-8■■■■□ 22.1
RCCD1-206ENST00000556618 WTAPQ15007 396 aa28.24■■■□□ 2.11
RCCD1-206ENST00000556618 SLFN13Q68D06 897 aa28.24■■■□□ 2.11
RCCD1-206ENST00000556618 IL17RAQ96F46 866 aa28.24■■■□□ 2.11
RCCD1-206ENST00000556618 RPAP3Q9H6T3 665 aaPredicted RBP28.24■■■□□ 2.11
RCCD1-206ENST00000556618 KAT14Q9H8E8 782 aa28.24■■■□□ 2.11
RCCD1-206ENST00000556618 TCEANC2Q96MN5 208 aa28.24■■■□□ 2.11
RCCD1-206ENST00000556618 LRRC2Q9BYS8 371 aa28.24■■■□□ 2.11
RCCD1-206ENST00000556618 SENP2Q9HC62 589 aa28.24■■■□□ 2.11
RCCD1-206ENST00000556618 ZSWIM6Q9HCJ5 1215 aa28.24■■■□□ 2.11
RCCD1-206ENST00000556618 GPHNQ9NQX3 736 aaPredicted RBP28.24■■■□□ 2.11
RCCD1-206ENST00000556618 USP17L15C9J2P7 530 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 USP17L13C9JLJ4 530 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 USP17L11C9JVI0 530 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 USP17L18D6R9N7 530 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 USP17L22D6RA61 530 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 USP17L17D6RBQ6 530 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 USP17L19D6RCP7 530 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 USP17L20D6RJB6 530 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 TRPA1O75762 1119 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 USP17L24Q0WX57 530 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 CATSPERGQ6ZRH7 1159 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 PNMA1Q8ND90 353 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 C22orf23Q9BZE7 217 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 UPF2Q9HAU5 1272 aaKnown RBP28.23■■■□□ 2.11
RCCD1-206ENST00000556618 LY9Q9HBG7 655 aa28.23■■■□□ 2.11
RCCD1-206ENST00000556618 SH2B2O14492 632 aaPredicted RBP28.22■■■□□ 2.11
RCCD1-206ENST00000556618 RPS6KB1P23443 525 aa28.22■■■□□ 2.11
RCCD1-206ENST00000556618 TAF1CQ15572 869 aaPredicted RBP28.22■■■□□ 2.11
RCCD1-206ENST00000556618 GMCL1Q96IK5 515 aa28.22■■■□□ 2.11
RCCD1-206ENST00000556618 NUP88Q99567 741 aaPredicted RBP28.22■■■□□ 2.11
RCCD1-206ENST00000556618 BEGAINQ9BUH8 593 aa28.22■■■□□ 2.11
RCCD1-206ENST00000556618 ASCC2Q9H1I8 757 aaPredicted RBP28.22■■■□□ 2.11
RCCD1-206ENST00000556618 MTMR7Q9Y216 660 aa28.22■■■□□ 2.11
RCCD1-206ENST00000556618 RLFQ13129 1914 aa28.22■■■□□ 2.11
RCCD1-206ENST00000556618 PARP14Q460N5 1801 aa28.22■■■□□ 2.11
RCCD1-206ENST00000556618 CA12O43570 354 aa28.21■■■□□ 2.11
RCCD1-206ENST00000556618 OSBPP22059 807 aa28.21■■■□□ 2.11
RCCD1-206ENST00000556618 FAM83BQ5T0W9 1011 aa28.21■■■□□ 2.11
RCCD1-206ENST00000556618 RUFY3Q7L099 469 aa28.21■■■□□ 2.11
RCCD1-206ENST00000556618 PNMA3Q9UL41 463 aa28.21■■■□□ 2.11
RCCD1-206ENST00000556618 CYP2C8P10632 490 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms